{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,17]],"date-time":"2026-09-17T17:03:44Z","timestamp":1789664624288,"version":"4.0.1"},"reference-count":75,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2018,5,24]],"date-time":"2018-05-24T00:00:00Z","timestamp":1527120000000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"the Graduate Student Innovation Foundation of Harbin Medical University","award":["YJSCX2016-41HYD"],"award-info":[{"award-number":["YJSCX2016-41HYD"]}]},{"name":"he Heilongjiang Province Education Bureau","award":["No. 12531266"],"award-info":[{"award-number":["No. 12531266"]}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Parasites Vectors"],"published-print":{"date-parts":[[2018,12]]},"DOI":"10.1186\/s13071-018-2892-7","type":"journal-article","created":{"date-parts":[[2018,5,24]],"date-time":"2018-05-24T11:21:18Z","timestamp":1527160878000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":56,"title":["Molecular characterizations of Cryptosporidium spp. and Enterocytozoon bieneusi in brown rats (Rattus norvegicus) from Heilongjiang Province, China"],"prefix":"10.1186","volume":"11","author":[{"given":"Wei","family":"Zhao","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jianguang","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Guangxu","family":"Ren","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ziyin","family":"Yang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fengkun","family":"Yang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Weizhe","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yingchu","family":"Xu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Aiqin","family":"Liu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hong","family":"Ling","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2018,5,24]]},"reference":[{"key":"2892_CR1","doi-asserted-by":"publisher","first-page":"981424","DOI":"10.1155\/2012\/981424","volume":"2012","author":"O Matos","year":"2012","unstructured":"Matos O, Lobo ML, Xiao L. Epidemiology of Enterocytozoon bieneusi infection in humans. J Parasit Res. 2012;2012:981424.","journal-title":"J Parasit Res."},{"key":"2892_CR2","doi-asserted-by":"publisher","first-page":"1667","DOI":"10.1017\/S0031182014001085","volume":"141","author":"U Ryan","year":"2014","unstructured":"Ryan U, Fayer R, Xiao L. Cryptosporidium species in humans and animals: Current understanding and research needs. Parasitology. 2014;141:1667\u201385.","journal-title":"Parasitology."},{"key":"2892_CR3","doi-asserted-by":"publisher","first-page":"485","DOI":"10.1097\/01.qco.0000244055.46382.23","volume":"19","author":"ES Didier","year":"2006","unstructured":"Didier ES, Weiss LM. Microsporidiosis: current status. Curr Opin Infect Dis. 2006;19:485\u201392.","journal-title":"Curr Opin Infect Dis."},{"key":"2892_CR4","doi-asserted-by":"publisher","first-page":"535","DOI":"10.1111\/pim.12350","volume":"38","author":"U Ryan","year":"2016","unstructured":"Ryan U, Zahedi A, Paparini A. Cryptosporidium in humans and animals - a One Health approach to prophylaxis. Parasite Immunol. 2016;38:535\u201347.","journal-title":"Parasite Immunol."},{"key":"2892_CR5","doi-asserted-by":"crossref","unstructured":"Sant\u00edn M, Fayer R. Microsporidiosis: Enterocytozoon bieneusi in domesticated and wild animals. Res Vet Sci. 2011;90:363\u201371.","DOI":"10.1016\/j.rvsc.2010.07.014"},{"key":"2892_CR6","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.ijpara.2017.09.004","volume":"48","author":"U Ryan","year":"2018","unstructured":"Ryan U, Hijjawi N, Xiao L. Foodborne cryptosporidiosis. Int J Parasitol. 2018;48:1\u201312.","journal-title":"Int J Parasitol."},{"key":"2892_CR7","doi-asserted-by":"publisher","first-page":"87","DOI":"10.1016\/S1473-3099(15)00349-7","volume":"6","author":"B Speich","year":"2016","unstructured":"Speich B, Croll D, F\u00fcrst T, Utzinger J, Keiser J. Effect of sanitation and water treatment on intestinal protozoa infection: a systematic review and meta-analysis. Lancet Infect Dis. 2016;6:87\u201399.","journal-title":"Lancet Infect Dis."},{"key":"2892_CR8","unstructured":"NIAID Emerging Infectious Diseases\/Pathogens. ( https:\/\/www.niaid.nih.gov\/research\/emerging-infectious-diseases-pathogens ). Accessed 7 May 2018."},{"key":"2892_CR9","unstructured":"Report of a Joint FAO\/WHO Expert Meeting, 3\u20137 September 2012, FAO Headquarters, Rome, Italy. ( http:\/\/www.fao.org\/food\/food-safety-quality\/a-z-index\/foodborne-parasites\/en\/ ). Accessed 7 May 2018."},{"key":"2892_CR10","doi-asserted-by":"publisher","first-page":"441","DOI":"10.1128\/EC.00302-08","volume":"8","author":"ES Didier","year":"2009","unstructured":"Didier ES, Weiss LM, Cali A, Marciano-Cabral F. Overview of the presentations on microsporidia and free-living amebae at the 10th International Workshops on Opportunistic Protists. Eukaryot Cell. 2009;8:441\u20135.","journal-title":"Eukaryot Cell."},{"key":"2892_CR11","doi-asserted-by":"publisher","first-page":"52","DOI":"10.1051\/parasite\/2016063","volume":"23","author":"Z Yang","year":"2016","unstructured":"Yang Z, Zhao W, Shen Y, Zhang W, Shi Y, Ren G, et al. Subtyping of Cryptosporidium cuniculus and genotyping of Enterocytozoon bieneusi in rabbits in two farms in Heilongjiang Province, China. Parasite. 2016;23:52.","journal-title":"Parasite."},{"key":"2892_CR12","doi-asserted-by":"publisher","first-page":"1487","DOI":"10.1111\/j.1365-2672.2010.04764.x","volume":"109","author":"RM Chalmers","year":"2010","unstructured":"Chalmers RM, Giles M. Zoonotic cryptosporidiosis in the UK - challenges for control. J Appl Microbiol. 2010;109:1487\u201397.","journal-title":"J Appl Microbiol."},{"key":"2892_CR13","doi-asserted-by":"crossref","unstructured":"Cacci\u00f2 SM, Sannella AR, Mariano V, Valentini S, Berti F, Tosini F, Pozio E. A rare Cryptosporidium parvum genotype associated with infection of lambs and zoonotic transmission in Italy. Vet Parasitol. 2013;191:128\u201331.","DOI":"10.1016\/j.vetpar.2012.08.010"},{"key":"2892_CR14","doi-asserted-by":"publisher","first-page":"1701","DOI":"10.3389\/fmicb.2017.01701","volume":"8","author":"Y Feng","year":"2017","unstructured":"Feng Y, Xiao L. Molecular epidemiology of Cryptosporidiosis in China. Front Microbiol. 2017;8:1701.","journal-title":"Front Microbiol."},{"key":"2892_CR15","doi-asserted-by":"publisher","first-page":"404","DOI":"10.1016\/j.exppara.2012.05.009","volume":"131","author":"A Paparini","year":"2012","unstructured":"Paparini A, Jackson B, Ward S, Young S, Ryan UM. Multiple Cryptosporidium genotypes detected in wild black rats (Rattus rattus) from northern Australia. Exp Parasitol. 2012;131:404\u201312.","journal-title":"Exp Parasitol."},{"key":"2892_CR16","doi-asserted-by":"publisher","first-page":"7693","DOI":"10.1128\/AEM.00848-07","volume":"73","author":"C Foo","year":"2007","unstructured":"Foo C, Farrell J, Boxell A, Robertson I, Ryan UM. Novel Cryptosporidium genotype in wild Australian mice (Mus domesticus). Appl Environ Microbiol. 2007;73:7693\u20136.","journal-title":"Appl Environ Microbiol."},{"key":"2892_CR17","doi-asserted-by":"publisher","first-page":"739","DOI":"10.1111\/j.1751-0813.2003.tb14602.x","volume":"81","author":"KS Warren","year":"2003","unstructured":"Warren KS, Swan RA, Morgan-Ryan UM, Friend JA, Elliot A. Cryptosporidium muris infection in bilbies (Macrotis lagotis). Aust Vet J. 2003;81:739\u201341.","journal-title":"Aust Vet J."},{"key":"2892_CR18","doi-asserted-by":"publisher","first-page":"166","DOI":"10.1016\/j.vetpar.2007.03.034","volume":"147","author":"MV Meireles","year":"2007","unstructured":"Meireles MV, Soares RM, Bonello F, Gennari SM. Natural infection with zoonotic subtype of Cryptosporidium parvum in capybara (Hydrochoerus hydrochaeris) from Brazil. Vet Parasitol. 2007;147:166\u201370.","journal-title":"Vet Parasitol."},{"key":"2892_CR19","doi-asserted-by":"publisher","first-page":"7692","DOI":"10.1128\/AEM.01386-09","volume":"75","author":"C Lv","year":"2009","unstructured":"Lv C, Zhang L, Wang R, Jian F, Zhang S, Ning C, et al. Cryptosporidium spp. in wild, laboratory, and pet rodents in China: prevalence and molecular characterization. Appl Environ Microbiol. 2009;75:7692\u20139.","journal-title":"Appl Environ Microbiol."},{"key":"2892_CR20","doi-asserted-by":"publisher","first-page":"800","DOI":"10.1017\/S0031182014001929","volume":"142","author":"Z Zhao","year":"2015","unstructured":"Zhao Z, Wang R, Zhao W, Qi M, Zhao J, Zhang L, et al. Genotyping and subtyping of Giardia and Cryptosporidium isolates from commensal rodents in China. Parasitology. 2015;142:800\u20136.","journal-title":"Parasitology."},{"key":"2892_CR21","doi-asserted-by":"publisher","first-page":"2905","DOI":"10.1007\/s00436-016-5076-4","volume":"115","author":"Q Li","year":"2016","unstructured":"Li Q, Li L, Tao W, Jiang Y, Wan Q, Lin Y, et al. Molecular investigation of Cryptosporidium in small caged pets in northeast China: host specificity and zoonotic implications. Parasitol Res. 2016;115:2905\u201311.","journal-title":"Parasitol Res."},{"key":"2892_CR22","doi-asserted-by":"publisher","first-page":"339","DOI":"10.1016\/j.parint.2015.05.007","volume":"64","author":"M Qi","year":"2015","unstructured":"Qi M, Luo N, Wang H, Yu F, Wang R, Huang J, et al. Zoonotic Cryptosporidium spp. and Enterocytozoon bieneusi in pet chinchillas (Chinchilla lanigera) in China. Parasitol Int. 2015;64:339\u201341.","journal-title":"Parasitol Int."},{"key":"2892_CR23","first-page":"350","volume":"11","author":"M Gholipoury","year":"2016","unstructured":"Gholipoury M, Rezai HR, Namroodi S, Arab Khazaeli F. Zoonotic and non-zoonotic parasites of wild rodents in Turkman Sahra, northeastern Iran. Iran J Parasitol. 2016;11:350\u20137.","journal-title":"Iran J Parasitol."},{"key":"2892_CR24","doi-asserted-by":"publisher","first-page":"6834206","DOI":"10.1155\/2016\/6834206","volume":"2016","author":"J Saki","year":"2016","unstructured":"Saki J, Foroutan-Rad M, Asadpouri R. Molecular characterization of Cryptosporidium spp. in wild rodents of southwestern Iran using 18S rRNA gene nested-PCR-RFLP and sequencing techniques. J Trop Med. 2016;2016:6834206.","journal-title":"J Trop Med."},{"key":"2892_CR25","doi-asserted-by":"publisher","first-page":"95","DOI":"10.14411\/fp.2008.012","volume":"55","author":"M Kv\u00e1c","year":"2008","unstructured":"Kv\u00e1c M, Hofmannov\u00e1 L, Bertolino S, Wauters L, Tosi G, Modr\u00fd D. Natural infection with two genotypes of Cryptosporidium in red squirrels (Sciurus vulgaris) in Italy. Folia Parasitol. 2008;55:95\u20139.","journal-title":"Folia Parasitol."},{"key":"2892_CR26","doi-asserted-by":"crossref","unstructured":"Kimura A, Edagawa A, Okada K, Takimoto A, Yonesho S, Karanis P. Detection and genotyping of Cryptosporidium from brown rats (Rattus norvegicus) captured in an urban area of Japan. Parasitol Res. 2007;100:1417\u201320.","DOI":"10.1007\/s00436-007-0488-9"},{"key":"2892_CR27","doi-asserted-by":"publisher","first-page":"184","DOI":"10.1016\/j.vetpar.2013.02.011","volume":"196","author":"F Murakoshi","year":"2013","unstructured":"Murakoshi F, Fukuda Y, Matsubara R, Kato Y, Sato R, Sasaki T, et al. Detection and genotyping of Cryptosporidium spp. in large Japanese field mice, Apodemus speciosus. Vet Parasitol. 2013;196:184\u20138.","journal-title":"Vet Parasitol."},{"key":"2892_CR28","doi-asserted-by":"publisher","first-page":"983","DOI":"10.1292\/jvms.66.983","volume":"66","author":"Y Nakai","year":"2004","unstructured":"Nakai Y, Hikosaka K, Sato M, Sasaki T, Kaneta Y, Okazaki N. Detection of Cryptosporidium muris type oocysts from beef cattle in a farm and from domestic and wild animals in and around the farm. J Vet Med Sci. 2004;66:983\u20134.","journal-title":"J Vet Med Sci."},{"key":"2892_CR29","doi-asserted-by":"publisher","first-page":"737","DOI":"10.3347\/kjp.2015.53.6.737","volume":"53","author":"J Song","year":"2015","unstructured":"Song J, Kim CY, Chang SN, Abdelkader TS, Han J, Kim TH, et al. Detection and molecular characterization of Cryptosporidium spp. from wild rodents and insectivores in South Korea. Korean J Parasitol. 2015;53:737\u201343.","journal-title":"Korean J Parasitol."},{"key":"2892_CR30","unstructured":"Ayinmode AB, Ogbonna NF, Widmer G. Detection and molecular identification of Cryptosporidium species in laboratory rats (Rattus norvegicus) in Ibadan, Nigeria. Ann Parasitol. 2017;63:105\u20139."},{"key":"2892_CR31","doi-asserted-by":"publisher","first-page":"5","DOI":"10.1016\/j.meegid.2013.01.011","volume":"16","author":"JS Ng-Hublin","year":"2013","unstructured":"Ng-Hublin JS, Singleton GR, Ryan U. Molecular characterization of Cryptosporidium spp. from wild rats and mice from rural communities in the Philippines. Infect Genet Evol. 2013;16:5\u201312.","journal-title":"Infect Genet Evol."},{"key":"2892_CR32","doi-asserted-by":"publisher","first-page":"1","DOI":"10.5604\/12321966.1141359","volume":"22","author":"A Matysiak","year":"2015","unstructured":"Matysiak A, Bu\u0144kowska-Gawlik K, Zale\u015bny G, Hildebrand J. Small rodents as reservoirs of Cryptosporidium spp. and Giardia spp. in south-western Poland. Ann Agric Environ Med. 2015;22:1\u20135.","journal-title":"Ann Agric Environ Med."},{"key":"2892_CR33","doi-asserted-by":"crossref","unstructured":"Bajer A, Bednarska M, Pawelczyk A, Behnke JM, Gilbert FS, Sinski E. Prevalence and abundance of Cryptosporidium parvum and Giardia spp. in wild rural rodents from the Mazury Lake District region of Poland. Parasitology. 2002;125:21\u201334.","DOI":"10.1017\/S0031182002001865"},{"key":"2892_CR34","doi-asserted-by":"publisher","first-page":"29","DOI":"10.1016\/j.actatropica.2017.04.013","volume":"172","author":"O Dani\u0161ov\u00e1","year":"2017","unstructured":"Dani\u0161ov\u00e1 O, Valen\u010d\u00e1kov\u00e1 A, Stanko M, Lupt\u00e1kov\u00e1 L, Hatalov\u00e1 E, \u010can\u00e1dy A. Rodents as a reservoir of infection caused by multiple zoonotic species\/genotypes of C. parvum, C. hominis, C. suis, C. scrofarum, and the first evidence of Cryptosporidium muskrat genotypes I and II of rodents in Europe. Acta Trop. 2017;172:29\u201335.","journal-title":"Acta Trop."},{"key":"2892_CR35","doi-asserted-by":"publisher","first-page":"1885","DOI":"10.1017\/S0950268812002609","volume":"141","author":"A Backhans","year":"2013","unstructured":"Backhans A, Jacobson M, Hansson I, Lebbad M, Lambertz ST, Gammelg\u00e5rd E, et al. Occurrence of pathogens in wild rodents caught on Swedish pig and chicken farms. Epidemiol Infect. 2013;141:1885\u201391.","journal-title":"Epidemiol Infect."},{"key":"2892_CR36","doi-asserted-by":"publisher","first-page":"287","DOI":"10.1016\/j.meegid.2015.10.002","volume":"36","author":"BLS Stenger","year":"2015","unstructured":"Stenger BLS, Clark ME, Kv\u00e1\u010d M, Khan E, Giddings CW, Prediger J, et al. North American tree squirrels and ground squirrels with overlapping ranges host different Cryptosporidium species and genotypes. Infect Genet Evol. 2015;36:287\u201393.","journal-title":"Infect Genet Evol."},{"key":"2892_CR37","doi-asserted-by":"publisher","first-page":"113","DOI":"10.1016\/j.meegid.2015.03.003","volume":"32","author":"BL Stenger","year":"2015","unstructured":"Stenger BL, Clark ME, Kv\u00e1\u010d M, Khan E, Giddings CW, Dyer NW, et al. Highly divergent 18S rRNA gene paralogs in a Cryptosporidium genotype from eastern chipmunks (Tamias striatus). Infect Genet Evol. 2015;32:113\u201323.","journal-title":"Infect Genet Evol."},{"key":"2892_CR38","doi-asserted-by":"publisher","first-page":"6475","DOI":"10.1128\/AEM.01034-07","volume":"73","author":"Y Feng","year":"2007","unstructured":"Feng Y, Alderisio KA, Yang W, Blancero LA, Kuhne WG, Nadareski CA, et al. Cryptosporidium genotypes in wildlife from a New York watershed. Appl Environ Microbiol. 2007;73:6475\u201383.","journal-title":"Appl Environ Microbiol."},{"key":"2892_CR39","doi-asserted-by":"publisher","first-page":"e0117991","DOI":"10.1371\/journal.pone.0117991","volume":"10","author":"MR Karim","year":"2015","unstructured":"Karim MR, Dong H, Li T, Yu F, Li D, Zhang L, et al. Predomination and new genotypes of Enterocytozoon bieneusi in captive nonhuman primates in zoos in China: high genetic diversity and zoonotic significance. PLoS One. 2015;10:e0117991.","journal-title":"PLoS One."},{"key":"2892_CR40","doi-asserted-by":"publisher","first-page":"e0142611","DOI":"10.1371\/journal.pone.0142611","volume":"10","author":"W Zhao","year":"2015","unstructured":"Zhao W, Zhang W, Yang Z, Liu A, Zhang L, Yang F, et al. Genotyping of Enterocytozoon bieneusi in farmed blue foxes (Alopex lagopus) and raccoon dogs (Nyctereutes procyonoides) in China. PLoS One. 2015;10:e0142611.","journal-title":"PLoS One."},{"key":"2892_CR41","doi-asserted-by":"publisher","first-page":"2708","DOI":"10.1128\/JCM.00725-07","volume":"45","author":"VA Cama","year":"2007","unstructured":"Cama VA, Pearson J, Cabrera L, Pacheco L, Gilman R, Meyer S, et al. Transmission of Enterocytozoon bieneusi between a child and guinea pigs. J Clin Microbiol. 2007;45:2708\u201310.","journal-title":"J Clin Microbiol."},{"key":"2892_CR42","doi-asserted-by":"publisher","first-page":"e0163605","DOI":"10.1371\/journal.pone.0163605","volume":"11","author":"L Deng","year":"2016","unstructured":"Deng L, Li W, Yu X, Gong C, Liu X, Zhong Z, et al. First report of the human-pathogenic Enterocytozoon bieneusi from red-bellied tree squirrels (Callosciurus erythraeus) in Sichuan, China. PLoS One. 2016;11:e0163605.","journal-title":"PLoS One."},{"key":"2892_CR43","doi-asserted-by":"publisher","first-page":"246","DOI":"10.1016\/j.vetpar.2010.12.044","volume":"178","author":"B Sak","year":"2011","unstructured":"Sak B, Kv\u00e1\u010d M, Kv\u011bto\u0148ov\u00e1 D, Albrecht T, Pi\u00e1lek J. The first report on natural Enterocytozoon bieneusi and Encephalitozoon spp. infections in wild East-European house mice (Mus musculus musculus) and West-European house mice (M. m. domesticus) in a hybrid zone across the Czech Republic-Germany border. Vet Parasitol. 2011;178:246\u201350.","journal-title":"Vet Parasitol."},{"key":"2892_CR44","doi-asserted-by":"publisher","first-page":"242","DOI":"10.1016\/j.vetpar.2015.10.018","volume":"214","author":"A Perec-Matysiak","year":"2015","unstructured":"Perec-Matysiak A, Bu\u0144kowska-Gawlik K, Kv\u00e1\u010d M, Sak B, Hildebrand J, Le\u015bnia\u0144ska K. Diversity of Enterocytozoon bieneusi genotypes among small rodents in southwestern Poland. Vet Parasitol. 2015;214:242\u20136.","journal-title":"Vet Parasitol."},{"key":"2892_CR45","doi-asserted-by":"publisher","first-page":"251","DOI":"10.5604\/12321966.1152075","volume":"22","author":"O Dani\u0161ov\u00e1","year":"2015","unstructured":"Dani\u0161ov\u00e1 O, Valen\u010d\u00e1kov\u00e1 A, Stanko M, Lupt\u00e1kov\u00e1 L, Hasajov\u00e1 A. First report of Enterocytozoon bieneusi and Encephalitozoon intestinalis infection of wild mice in Slovakia. Ann Agric Environ Med. 2015;22:251\u20132.","journal-title":"Ann Agric Environ Med."},{"key":"2892_CR46","doi-asserted-by":"publisher","first-page":"218","DOI":"10.1128\/AEM.02997-13","volume":"80","author":"Y Guo","year":"2014","unstructured":"Guo Y, Alderisio KA, Yang W, Cama V, Feng Y, Xiao L. Host specificity and source of Enterocytozoon bieneusi genotypes in a drinking source watershed. Appl Environ Microbiol. 2014;80:218\u201325.","journal-title":"Appl Environ Microbiol."},{"key":"2892_CR47","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1016\/j.vetpar.2015.03.022","volume":"210","author":"DM Roellig","year":"2015","unstructured":"Roellig DM, Salzer JS, Carroll DS, Ritter JM, Drew C, Gallardo-Romero N, et al. Identification of Giardia duodenalis and Enterocytozoon bieneusi in an epizoological investigation of a laboratory colony of prairie dogs, Cynomys ludovicianus. Vet Parasitol. 2015;210:91\u20137.","journal-title":"Vet Parasitol."},{"key":"2892_CR48","doi-asserted-by":"publisher","first-page":"4446","DOI":"10.1128\/AEM.71.8.4446-4454.2005","volume":"71","author":"J Jiang","year":"2005","unstructured":"Jiang J, Alderisio KA, Xiao L. Distribution of Cryptosporidium genotypes in storm event water samples from three watersheds in New York. Appl Environ Microbiol. 2005;71:4446\u201354.","journal-title":"Appl Environ Microbiol."},{"key":"2892_CR49","doi-asserted-by":"publisher","first-page":"221","DOI":"10.1080\/10408410902989837","volume":"35","author":"BG Meerburg","year":"2009","unstructured":"Meerburg BG, Singleton GR, Kijlstra A. Rodent-borne diseases and their risks for public health. Crit Rev Microbiol. 2009;35:221\u201370.","journal-title":"Crit Rev Microbiol."},{"key":"2892_CR50","doi-asserted-by":"publisher","first-page":"125","DOI":"10.1016\/j.vetpar.2015.01.014","volume":"208","author":"W Li","year":"2015","unstructured":"Li W, Li Y, Song M, Lu Y, Yang J, Tao W, et al. Prevalence and genetic characteristics of Cryptosporidium, Enterocytozoon bieneusi and Giardia duodenalis in cats and dogs in Heilongjiang province, China. Vet Parasitol. 2015;208:125\u201334.","journal-title":"Vet Parasitol."},{"key":"2892_CR51","doi-asserted-by":"publisher","first-page":"3699","DOI":"10.1128\/AEM.00807-14","volume":"80","author":"W Zhao","year":"2014","unstructured":"Zhao W, Zhang W, Yang F, Cao J, Liu H, Yang D, et al. High prevalence of Enterocytozoon bieneusi in asymptomatic pigs and assessment of zoonotic risk at the genotype level. Appl Environ Microbiol. 2014;80:3699\u2013707.","journal-title":"Appl Environ Microbiol."},{"key":"2892_CR52","doi-asserted-by":"publisher","first-page":"1835","DOI":"10.3389\/fmicb.2017.01835","volume":"8","author":"W Zhang","year":"2017","unstructured":"Zhang W, Ren G, Zhao W, Yang Z, Shen Y, Sun Y, et al. Genotyping of Enterocytozoon bieneusi and subtyping of Blastocystis in cancer patients: relationship to diarrhea and assessment of zoonotic transmission. Front Microbiol. 2017;8:1835.","journal-title":"Front Microbiol."},{"key":"2892_CR53","doi-asserted-by":"publisher","first-page":"4363","DOI":"10.1128\/JCM.02295-14","volume":"52","author":"J Yang","year":"2014","unstructured":"Yang J, Song M, Wan Q, Li Y, Lu Y, Jiang Y, et al. Enterocytozoon bieneusi genotypes in children in Northeast China and assessment of risk of zoonotic transmission. J Clin Microbiol. 2014;52:4363\u20137.","journal-title":"J Clin Microbiol."},{"key":"2892_CR54","doi-asserted-by":"crossref","first-page":"1578","DOI":"10.1128\/AEM.65.4.1578-1583.1999","volume":"65","author":"L Xiao","year":"1999","unstructured":"Xiao L, Escalante L, Yang C, Sulaiman I, Escalante AA, Montali RJ, et al. Phylogenetic analysis of Cryptosporidium parasites based on the small-subunit rRNA gene locus. Appl Environ Microbiol. 1999;65:1578\u201383.","journal-title":"Appl Environ Microbiol."},{"key":"2892_CR55","doi-asserted-by":"publisher","first-page":"2595","DOI":"10.1128\/AEM.68.5.2595-2599.2002","volume":"68","author":"MA Buckholt","year":"2002","unstructured":"Buckholt MA, Lee JH, Tzipori S. Prevalence of Enterocytozoon bieneusi in swine: an 18-month survey at a slaughterhouse in Massachusetts. Appl Environ Microbiol. 2002;68:2595\u20139.","journal-title":"Appl Environ Microbiol."},{"key":"2892_CR56","doi-asserted-by":"publisher","first-page":"4876","DOI":"10.1093\/nar\/25.24.4876","volume":"24","author":"JD Thompson","year":"1997","unstructured":"Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 1997;24:4876\u201382.","journal-title":"Nucleic Acids Res."},{"key":"2892_CR57","doi-asserted-by":"publisher","first-page":"34","DOI":"10.1111\/j.1550-7408.2008.00380.x","volume":"56","author":"M Sant\u00edn","year":"2009","unstructured":"Sant\u00edn M, Fayer R. Enterocytozoon bieneusi genotype nomenclature based on the internal transcribed spacer sequence: a consensus. J Eukaryot Microbiol. 2009;56:34\u20138.","journal-title":"J Eukaryot Microbiol."},{"key":"2892_CR58","doi-asserted-by":"publisher","first-page":"128","DOI":"10.1016\/j.exppara.2008.11.005","volume":"124","author":"Y Feng","year":"2010","unstructured":"Feng Y. Cryptosporidium in wild placental mammals. Exp Parasitol. 2010;124:128\u201337.","journal-title":"Exp Parasitol."},{"key":"2892_CR59","doi-asserted-by":"publisher","first-page":"586","DOI":"10.7589\/0090-3558-43.4.586","volume":"43","author":"PE Ziegler","year":"2007","unstructured":"Ziegler PE, Wade SE, Schaaf SL, Chang YF, Mohammed HO. Cryptosporidium spp. from small mammals in the New York City watershed. J Wildl Dis. 2007;43:586\u201396.","journal-title":"J Wildl Dis."},{"key":"2892_CR60","doi-asserted-by":"publisher","first-page":"311","DOI":"10.2166\/wh.2009.185","volume":"8","author":"RM Chalmers","year":"2010","unstructured":"Chalmers RM, Robinson G, Elwin K, Hadfield SJ, Thomas E, Watkins J, et al. Detection of Cryptosporidium species and sources of contamination with Cryptosporidium hominis during a waterborne outbreak in north west Wales. J Wat Health. 2010;8:311\u201325.","journal-title":"J Wat Health."},{"key":"2892_CR61","doi-asserted-by":"publisher","first-page":"153","DOI":"10.1128\/JCM.01777-08","volume":"47","author":"Y Feng","year":"2009","unstructured":"Feng Y, Li N, Duan L, Xiao L. Cryptosporidium genotype and subtype distribution in raw wastewater in Shanghai, China: evidence for possible unique Cryptosporidium hominis transmission. J Clin Microbiol. 2009;47:153\u20137.","journal-title":"J Clin Microbiol."},{"key":"2892_CR62","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1016\/j.meegid.2012.09.009","volume":"15","author":"NJ Ruecker","year":"2013","unstructured":"Ruecker NJ, Matsune JC, Lapen DR, Topp E, Edge TA, Neumann NF. The detection of Cryptosporidium and the resolution of mixtures of species and genotypes from water. Infect Genet Evol. 2013;15:3\u20139.","journal-title":"Infect Genet Evol."},{"key":"2892_CR63","doi-asserted-by":"publisher","first-page":"23","DOI":"10.1016\/j.vetpar.2010.04.028","volume":"172","author":"R Fayer","year":"2010","unstructured":"Fayer R, Sant\u00edn M, Macarisin D. Cryptosporidium ubiquitum n. sp. in animals and humans. Vet Parasitol. 2010;172:23\u201332.","journal-title":"Vet Parasitol."},{"key":"2892_CR64","doi-asserted-by":"publisher","first-page":"142","DOI":"10.1016\/j.eimc.2015.05.010","volume":"34","author":"MA Blanco","year":"2016","unstructured":"Blanco MA, de Lucio A, Fuentes I, Carmena D. Cryptosporidium ubiquitum in Venezuela: First report in a paediatric patient with acute diarrhoea. Enferm Infecc Microbiol Clin. 2016;34:142\u20133.","journal-title":"Enferm Infecc Microbiol Clin."},{"key":"2892_CR65","doi-asserted-by":"publisher","first-page":"339","DOI":"10.1017\/S0031182006001533","volume":"134","author":"RB Langkjaer","year":"2007","unstructured":"Langkjaer RB, Vigre H, Enemark HL, Maddox-Hyttel C. Molecular andphylogenetic characterization of Cryptosporidium and Giardia from pigs and cattle in Denmark. Parasitology. 2007;134:339\u201350.","journal-title":"Parasitology."},{"key":"2892_CR66","doi-asserted-by":"publisher","first-page":"10","DOI":"10.1645\/17-140","volume":"104","author":"W Tao","year":"2018","unstructured":"Tao W, Li Y, Yang H, Song M, Lu Y, Li W. Widespread occurrence of zoonotic Cryptosporidium species and subtypes in dairy cattle from northeast China: public health concerns. J Parasitol. 2018;104:10\u20137.","journal-title":"J Parasitol"},{"key":"2892_CR67","doi-asserted-by":"publisher","first-page":"58","DOI":"10.1016\/j.vetpar.2015.11.009","volume":"215","author":"P Li","year":"2016","unstructured":"Li P, Cai J, Cai M, Wu W, Li C, Lei M, et al. Distribution of Cryptosporidium species in Tibetan sheep and yaks in Qinghai, China. Vet Parasitol. 2016;215:58\u201362.","journal-title":"Vet Parasitol."},{"key":"2892_CR68","doi-asserted-by":"publisher","first-page":"41","DOI":"10.1016\/j.vetpar.2010.03.008","volume":"171","author":"SM Khan","year":"2010","unstructured":"Khan SM, Debnath C, Pramanik AK, Xiao L, Nozaki T, Ganguly S. Molecular characterization and assessment of zoonotic transmission of Cryptosporidium from dairy cattle in West Bengal, India. Vet Parasitol. 2010;171:41\u20137.","journal-title":"Vet Parasitol."},{"key":"2892_CR69","doi-asserted-by":"crossref","unstructured":"Ong CSL, Eisler DL, Alikhani A, Fung Vicki WK, Tomblin J, Bowie WR, et al. Novel Cryptosporidium genotypes in sporadic cryptosporidiosis cases: first report of human infections with a cervinegenotype. Emerg Infect Dis. 2002;8:263\u20138.","DOI":"10.3201\/eid0803.010194"},{"key":"2892_CR70","doi-asserted-by":"publisher","first-page":"3326","DOI":"10.1128\/AEM.00328-15","volume":"81","author":"Y Jiang","year":"2015","unstructured":"Jiang Y, Tao W, Wan Q, Li Q, Yang Y, Lin Y, et al. Zoonotic and potentially host-adapted Enterocytozoon bieneusi genotypes in sheep and cattle in northeast China and an increasing concern about the zoonotic importance of previously considered ruminant-adapted genotypes. Appl Environ Microbiol. 2015;81:3326\u201335.","journal-title":"Appl Environ Microbiol."},{"key":"2892_CR71","doi-asserted-by":"publisher","first-page":"e1809","DOI":"10.1371\/journal.pntd.0001809","volume":"6","author":"N Li","year":"2012","unstructured":"Li N, Xiao L, Wang L, Zhao S, Zhao X, Duan L, et al. Molecular surveillance of Cryptosporidium spp., Giardia duodenalis, and Enterocytozoon bieneusi by genotyping and subtyping parasites in wastewater. PLoS Negl Trop Dis. 2012;6:e1809.","journal-title":"PLoS Negl Trop Dis."},{"key":"2892_CR72","first-page":"1658","volume":"190","author":"C Bern","year":"2015","unstructured":"Bern C, Kawai V, Vargas D, Rabke-Verani J, Williamson J, Chavez-Valdez R, et al. The epidemiology of intestinal microsporidiosis in patients with HIV\/AIDS in Lima, Peru. J Infect Dis. 2015;190:1658\u201364.","journal-title":"J Infect Dis."},{"key":"2892_CR73","doi-asserted-by":"publisher","first-page":"197","DOI":"10.1016\/j.ijpara.2011.12.002","volume":"42","author":"ML Lobo","year":"2012","unstructured":"Lobo ML, Xiao L, Antunes F, Matos O. Microsporidia as emerging pathogens and the implication for public health: a 10-year study on HIV-positive and -negative patients. Int J Parasitol. 2012;42:197\u2013205.","journal-title":"Int J Parasitol."},{"key":"2892_CR74","doi-asserted-by":"publisher","first-page":"591","DOI":"10.1111\/j.1550-7408.2003.tb00642.x","volume":"50","author":"IM Sulaiman","year":"2003","unstructured":"Sulaiman IM, Bern C, Gilman R, Cama V, Kawai V, Vargas D, et al. A molecular biologic study of Enterocytozoon bieneusi in HIV-infected patients in Lima, Peru. J Eukaryot Microbiol. 2003;50:591\u20136.","journal-title":"J Eukaryot Microbiol."},{"key":"2892_CR75","doi-asserted-by":"publisher","first-page":"265","DOI":"10.1016\/j.meegid.2015.03.026","volume":"32","author":"W Zhao","year":"2015","unstructured":"Zhao W, Zhang W, Yang D, Zhang L, Wang R, Liu A. Prevalence of Enterocytozoon bieneusi and genetic diversity of ITS genotypes in sheep and goats in China. Infect Genet Evol. 2015;32:265\u201370.","journal-title":"Infect Genet Evol."}],"container-title":["Parasites &amp; Vectors"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s13071-018-2892-7.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/s13071-018-2892-7\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s13071-018-2892-7.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,11,2]],"date-time":"2020-11-02T11:10:37Z","timestamp":1604315437000},"score":1,"resource":{"primary":{"URL":"https:\/\/parasitesandvectors.biomedcentral.com\/articles\/10.1186\/s13071-018-2892-7"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,5,24]]},"references-count":75,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2018,12]]}},"alternative-id":["2892"],"URL":"https:\/\/doi.org\/10.1186\/s13071-018-2892-7","relation":{},"ISSN":["1756-3305"],"issn-type":[{"value":"1756-3305","type":"electronic"}],"subject":[],"published":{"date-parts":[[2018,5,24]]},"assertion":[{"value":"8 February 2018","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"8 May 2018","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"24 May 2018","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"All the animals were handled and cared for according to the Chinese Laboratory Animal Administration Act of 1998. The research of protocol was reviewed and approved by the Research Ethics Committee and the Animal Ethical Committee of Harbin Medical University (HMUIRB20130009).","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethics approval and consent to participate"}},{"value":"The authors declare that they have no competing interests.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}},{"value":"Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Publisher\u2019s Note"}}],"article-number":"313"}}