{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,9,29]],"date-time":"2025-09-29T15:30:26Z","timestamp":1759159826100},"reference-count":25,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2016,9,8]],"date-time":"2016-09-08T00:00:00Z","timestamp":1473292800000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["SpringerPlus"],"published-print":{"date-parts":[[2016,12]]},"DOI":"10.1186\/s40064-016-3174-5","type":"journal-article","created":{"date-parts":[[2016,9,8]],"date-time":"2016-09-08T12:01:08Z","timestamp":1473336068000},"update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":14,"title":["Molecular epidemiology of hepatitis B virus isolated from Bangladesh"],"prefix":"10.1186","volume":"5","author":[{"given":"Modhusudon","family":"Shaha","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sheikh Ariful","family":"Hoque","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sabita Rezwana","family":"Rahman","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2016,9,8]]},"reference":[{"issue":"Pt 2","key":"3174_CR1","doi-asserted-by":"crossref","first-page":"379","DOI":"10.1099\/0022-1317-81-2-379","volume":"81","author":"SM Bowyer","year":"2000","unstructured":"Bowyer SM, Sim JG (2000) Relationships within and between genotypes of hepatitis B virus at points across the genome: footprints of recombination in certain isolates. J Gen Virol 81(Pt 2):379\u2013392","journal-title":"J Gen Virol"},{"issue":"8711","key":"3174_CR2","doi-asserted-by":"crossref","first-page":"325","DOI":"10.1016\/0140-6736(90)91874-A","volume":"336","author":"WF Carman","year":"1990","unstructured":"Carman WF, Zanetti AR, Karayiannis P, Waters J, Manzillo G, Tanzi E, Zuckerman AJ, Thomas HC (1990) Vaccine-induced escape mutant of hepatitis B virus. Lancet 336(8711):325\u2013329","journal-title":"Lancet"},{"issue":"8","key":"3174_CR3","doi-asserted-by":"publisher","first-page":"1417","DOI":"10.1111\/j.1440-1746.2009.05864.x","volume":"24","author":"Y Han","year":"2009","unstructured":"Han Y, Huang LH, Liu CM, Yang S, Li J, Lin ZM, Kong XF, de Yu M, Zhang DH, Jin GD, Lu ZM, Gong QM, Zhang XX (2009) Characterization of hepatitis B virus reverse transcriptase sequences in Chinese treatment naive patients. J Gastroenterol Hepatol 24(8):1417\u20131423. doi: 10.1111\/j.1440-1746.2009.05864.x","journal-title":"J Gastroenterol Hepatol"},{"issue":"1","key":"3174_CR4","doi-asserted-by":"publisher","first-page":"36","DOI":"10.1159\/000323521","volume":"55","author":"AM Ismail","year":"2012","unstructured":"Ismail AM, Samuel P, Eapen CE, Kannangai R, Abraham P (2012) Antiviral resistance mutations and genotype-associated amino acid substitutions in treatment-naive hepatitis B virus-infected individuals from the Indian subcontinent. Intervirology 55(1):36\u201344. doi: 10.1159\/000323521","journal-title":"Intervirology"},{"issue":"21","key":"3174_CR5","doi-asserted-by":"publisher","first-page":"2947","DOI":"10.1093\/bioinformatics\/btm404","volume":"23","author":"MA Larkin","year":"2007","unstructured":"Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23(21):2947\u20132948. doi: 10.1093\/bioinformatics\/btm404","journal-title":"Bioinformatics"},{"issue":"2","key":"3174_CR6","doi-asserted-by":"publisher","first-page":"422","DOI":"10.1016\/j.jhep.2005.11.036","volume":"44","author":"S Locarnini","year":"2006","unstructured":"Locarnini S, Mason WS (2006) Cellular and virological mechanisms of HBV drug resistance. J Hepatol 44(2):422\u2013431. doi: 10.1016\/j.jhep.2005.11.036","journal-title":"J Hepatol"},{"issue":"2","key":"3174_CR7","first-page":"147","volume":"8","author":"MA Mahtab","year":"2008","unstructured":"Mahtab MA, Rahman S, Khan M (2008) Occult hepatitis B virus related decompensated cirrhosis of liver in young males: first report of two cases from Bangladesh. Hepat Mon 8(2):147\u2013150","journal-title":"Hepat Mon"},{"issue":"4","key":"3174_CR8","first-page":"219","volume":"25","author":"M Mamun Al","year":"2006","unstructured":"Mamun Al M, Kumar SI, Rahman S, Kamal M, Khan M, Aggarwal R (2006) Hepatitis B genotypes virus among chronically infected patients in a tertiary-care hospital in Bangladesh. Indian J Gastroenterol 25(4):219\u2013221","journal-title":"Indian J Gastroenterol"},{"issue":"RR-16","key":"3174_CR9","first-page":"1","volume":"54","author":"EE Mast","year":"2005","unstructured":"Mast EE, Margolis HS, Fiore AE, Brink EW, Goldstein ST, Wang SA, Moyer LA, Bell BP, Alter MJ (2005) A comprehensive immunization strategy to eliminate transmission of hepatitis B virus infection in the United States: recommendations of the Advisory Committee on Immunization Practices (ACIP) part 1: immunization of infants, children, and adolescents. MMWR Recomm Rep 54(RR-16):1\u201331","journal-title":"MMWR Recomm Rep"},{"issue":"Web Server issu","key":"3174_CR10","doi-asserted-by":"publisher","first-page":"W597","DOI":"10.1093\/nar\/gkt376","volume":"41","author":"H McWilliam","year":"2013","unstructured":"McWilliam H, Li W, Uludag M, Squizzato S, Park YM, Buso N, Cowley AP, Lopez R (2013) Analysis tool Web services from the EMBL-EBI. Nucl Acids Res 41(Web Server issue):W597\u2013W600. doi: 10.1093\/nar\/gkt376","journal-title":"Nucl Acids Res"},{"issue":"3","key":"3174_CR11","doi-asserted-by":"publisher","first-page":"382","DOI":"10.1007\/s11262-012-0715-z","volume":"44","author":"A Moradi","year":"2012","unstructured":"Moradi A, Zhand S, Ghaemi A, Javid N, Tabarraei A (2012) Mutations in the S gene region of hepatitis B virus genotype D in Golestan Province-Iran. Virus Genes 44(3):382\u2013387. doi: 10.1007\/s11262-012-0715-z","journal-title":"Virus Genes"},{"issue":"Pt 7","key":"3174_CR12","doi-asserted-by":"crossref","first-page":"1341","DOI":"10.1099\/0022-1317-74-7-1341","volume":"74","author":"H Norder","year":"1993","unstructured":"Norder H, Hammas B, Lee SD, Bile K, Courouce AM, Mushahwar IK, Magnius LO (1993) Genetic relatedness of hepatitis B viral strains of diverse geographical origin and natural variations in the primary structure of the surface antigen. J Gen Virol 74(Pt 7):1341\u20131348","journal-title":"J Gen Virol"},{"issue":"2","key":"3174_CR13","doi-asserted-by":"publisher","first-page":"489","DOI":"10.1006\/viro.1994.1060","volume":"198","author":"H Norder","year":"1994","unstructured":"Norder H, Courouce AM, Magnius LO (1994) Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virology 198(2):489\u2013503. doi: 10.1006\/viro.1994.1060","journal-title":"Virology"},{"issue":"6","key":"3174_CR14","doi-asserted-by":"crossref","first-page":"753","DOI":"10.3748\/wjg.15.753","volume":"15","author":"R Pastor","year":"2009","unstructured":"Pastor R, Habersetzer F, Fafi-Kremer S, Doffoel M, Baumert TF, Gut JP, Stoll-Keller F, Schvoerer E (2009) Hepatitis B virus mutations potentially conferring adefovir\/tenofovir resistance in treatment-naive patients. World J Gastroenterol 15(6):753\u2013755","journal-title":"World J Gastroenterol"},{"issue":"1","key":"3174_CR15","doi-asserted-by":"publisher","first-page":"45","DOI":"10.1159\/000096312","volume":"50","author":"MA Purdy","year":"2007","unstructured":"Purdy MA, Talekar G, Swenson P, Araujo A, Fields H (2007) A new algorithm for deduction of hepatitis B surface antigen subtype determinants from the amino acid sequence. Intervirology 50(1):45\u201351. doi: 10.1159\/000096312","journal-title":"Intervirology"},{"key":"3174_CR16","doi-asserted-by":"publisher","first-page":"278","DOI":"10.1186\/s40064-016-1840-2","volume":"5","author":"MA Rahman","year":"2016","unstructured":"Rahman MA, Hakim F, Ahmed M, Ahsan CR, Nessa J, Yasmin M (2016) Prevalence of genotypes and subtypes of hepatitis B viruses in Bangladeshi population. SpringerPlus 5:278. doi: 10.1186\/s40064-016-1840-2","journal-title":"SpringerPlus"},{"issue":"1","key":"3174_CR17","doi-asserted-by":"publisher","first-page":"23","DOI":"10.1111\/j.1365-2893.2009.01149.x","volume":"17","author":"M Sayan","year":"2010","unstructured":"Sayan M, Akhan SC, Meric M (2010) Naturally occurring amino-acid substitutions to nucleos(t)ide analogues in treatment naive Turkish patients with chronic hepatitis B. J Viral Hepat 17(1):23\u201327. doi: 10.1111\/j.1365-2893.2009.01149.x","journal-title":"J Viral Hepat"},{"issue":"3 Pt 2","key":"3174_CR18","doi-asserted-by":"publisher","first-page":"403","DOI":"10.1111\/j.1423-0410.2009.01272.x","volume":"98","author":"H Scheiblauer","year":"2010","unstructured":"Scheiblauer H, El-Nageh M, Diaz S, Nick S, Zeichhardt H, Grunert HP, Prince A (2010) Performance evaluation of 70 hepatitis B virus (HBV) surface antigen (HBsAg) assays from around the world by a geographically diverse panel with an array of HBV genotypes and HBsAg subtypes. Vox Sang 98(3 Pt 2):403\u2013414. doi: 10.1111\/j.1423-0410.2009.01272.x","journal-title":"Vox Sang"},{"issue":"4","key":"3174_CR19","doi-asserted-by":"publisher","first-page":"217","DOI":"10.1089\/vim.2014.0147","volume":"28","author":"M Shaha","year":"2015","unstructured":"Shaha M, Hoque SA, Ahmed MF, Rahman SR (2015) Effects of risk factors on anti-HBs development in hepatitis B vaccinated and nonvaccinated populations. Viral Immunol 28(4):217\u2013221. doi: 10.1089\/vim.2014.0147","journal-title":"Viral Immunol"},{"issue":"1","key":"3174_CR20","doi-asserted-by":"publisher","first-page":"163","DOI":"10.1128\/JCM.01630-12","volume":"51","author":"B Simon","year":"2013","unstructured":"Simon B, Kundi M, Puchhammer E (2013) Analysis of mutations in the S gene of hepatitis B virus strains in patients with chronic infection by online bioinformatics tools. J Clin Microbiol 51(1):163\u2013168. doi: 10.1128\/JCM.01630-12","journal-title":"J Clin Microbiol"},{"issue":"1","key":"3174_CR21","doi-asserted-by":"publisher","first-page":"e13173","DOI":"10.5812\/hepatmon.13173","volume":"14","author":"J Suppiah","year":"2014","unstructured":"Suppiah J, Mohd Zain R, Haji Nawi S, Bahari N, Saat Z (2014) Drug-resistance associated mutations in polymerase (p) gene of hepatitis B virus isolated from malaysian HBV carriers. Hepat Mon 14(1):e13173. doi: 10.5812\/hepatmon.13173","journal-title":"Hepat Mon"},{"issue":"10","key":"3174_CR22","doi-asserted-by":"publisher","first-page":"2731","DOI":"10.1093\/molbev\/msr121","volume":"28","author":"K Tamura","year":"2011","unstructured":"Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731\u20132739. doi: 10.1093\/molbev\/msr121","journal-title":"Mol Biol Evol"},{"issue":"1","key":"3174_CR23","doi-asserted-by":"crossref","first-page":"73","DOI":"10.7883\/yoken.JJID.2008.73","volume":"61","author":"V Velu","year":"2008","unstructured":"Velu V, Saravanan S, Nandakumar S, Dhevahi E, Shankar EM, Murugavel KG, Kumarasamy T, Thyagarajan SP (2008) Transmission of \u201ca\u201d determinant variants of hepatitis B virus in immunized babies born to HBsAg carrier mothers. Jpn J Infect Dis 61(1):73\u201376","journal-title":"Jpn J Infect Dis"},{"issue":"Suppl 1","key":"3174_CR24","doi-asserted-by":"publisher","first-page":"S15","DOI":"10.1186\/1755-8794-6-S1-S15","volume":"6","author":"F Wang","year":"2013","unstructured":"Wang F, Lu L, Yu C, Lv Z, Luo X, Wan C, Hu Z, Zhu Q, Deng Y, Zhang C (2013) Development of a novel DNA sequencing method not only for hepatitis B virus genotyping but also for drug resistant mutation detection. BMC Med Genomics 6(Suppl 1):S15. doi: 10.1186\/1755-8794-6-S1-S15","journal-title":"BMC Med Genomics"},{"issue":"9","key":"3174_CR25","doi-asserted-by":"publisher","first-page":"1189","DOI":"10.1093\/bioinformatics\/btp033","volume":"25","author":"AM Waterhouse","year":"2009","unstructured":"Waterhouse AM, Procter JB, Martin DM, Clamp M, Barton GJ (2009) Jalview version 2\u2014a multiple sequence alignment editor and analysis workbench. Bioinformatics 25(9):1189\u20131191. doi: 10.1093\/bioinformatics\/btp033","journal-title":"Bioinformatics"}],"container-title":["SpringerPlus"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s40064-016-3174-5.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/s40064-016-3174-5\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s40064-016-3174-5.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,8,20]],"date-time":"2023-08-20T00:45:11Z","timestamp":1692492311000},"score":1,"resource":{"primary":{"URL":"http:\/\/springerplus.springeropen.com\/articles\/10.1186\/s40064-016-3174-5"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,9,8]]},"references-count":25,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2016,12]]}},"alternative-id":["3174"],"URL":"https:\/\/doi.org\/10.1186\/s40064-016-3174-5","relation":{},"ISSN":["2193-1801"],"issn-type":[{"value":"2193-1801","type":"electronic"}],"subject":[],"published":{"date-parts":[[2016,9,8]]},"article-number":"1513"}}