{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,22]],"date-time":"2025-10-22T18:10:01Z","timestamp":1761156601557,"version":"3.37.3"},"reference-count":57,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2018,12,1]],"date-time":"2018-12-01T00:00:00Z","timestamp":1543622400000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"Winn Feline Foundation and the George Sydney and Phyllis Redman Miller Trust","award":["MT\u201313\u2013010"],"award-info":[{"award-number":["MT\u201313\u2013010"]}]},{"DOI":"10.13039\/100001257","name":"National Geographic Society Education Foundation","doi-asserted-by":"crossref","award":["MT\u201313\u2013010"],"award-info":[{"award-number":["MT\u201313\u2013010"]}],"id":[{"id":"10.13039\/100001257","id-type":"DOI","asserted-by":"crossref"}]},{"name":"University of Missouri Gilbreath-McLorn Endowment"},{"DOI":"10.13039\/100011179","name":"Cornell Feline Health Center","doi-asserted-by":"crossref","id":[{"id":"10.13039\/100011179","id-type":"DOI","asserted-by":"crossref"}]},{"name":"contributions from the 99 Lives Consortium participants"},{"name":"Associazione Nazionale Felina Italiana"},{"DOI":"10.13039\/100012895","name":"Zoetis","doi-asserted-by":"crossref","id":[{"id":"10.13039\/100012895","id-type":"DOI","asserted-by":"crossref"}]},{"name":"Orivet Genetic Pet Care, Langford Veterinary Services, the World Cat Federation, and public donations"},{"DOI":"10.13039\/100012352","name":"Universit\u00e0 degli Studi di Milano","doi-asserted-by":"publisher","award":["Internal funds"],"award-info":[{"award-number":["Internal funds"]}],"id":[{"id":"10.13039\/100012352","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Genomics"],"published-print":{"date-parts":[[2018,12]]},"DOI":"10.1186\/s12864-018-5297-2","type":"journal-article","created":{"date-parts":[[2018,12,10]],"date-time":"2018-12-10T09:13:32Z","timestamp":1544433212000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":18,"title":["First genome-wide CNV mapping in FELIS CATUS using next generation sequencing data"],"prefix":"10.1186","volume":"19","author":[{"name":"the 99Lives Consortium","sequence":"first","affiliation":[]},{"given":"F.","family":"Genova","sequence":"first","affiliation":[]},{"given":"M.","family":"Longeri","sequence":"additional","affiliation":[]},{"given":"L. A.","family":"Lyons","sequence":"additional","affiliation":[]},{"given":"A.","family":"Bagnato","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8972-1730","authenticated-orcid":false,"given":"M. G.","family":"Strillacci","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2018,12,10]]},"reference":[{"issue":"2148","key":"5297_CR1","doi-asserted-by":"publisher","first-page":"210","DOI":"10.1126\/science.83.2148.210","volume":"83","author":"CB Bridges","year":"1936","unstructured":"Bridges CB. The bar \u201cgene\u201d a duplication. Science. 1936;83(2148):210\u20131.","journal-title":"Science"},{"issue":"R1","key":"5297_CR2","doi-asserted-by":"publisher","first-page":"R1","DOI":"10.1093\/hmg\/ddp011","volume":"18","author":"CN Henrichsen","year":"2009","unstructured":"Henrichsen CN, Chaignat E, Reymond A. Copy number variants, diseases and gene expression. Hum Mol Genet. 2009;18(R1):R1\u20138.","journal-title":"Hum Mol Genet"},{"issue":"10","key":"5297_CR3","doi-asserted-by":"publisher","first-page":"e254","DOI":"10.1371\/journal.pbio.0050254","volume":"5","author":"S Levy","year":"2007","unstructured":"Levy S, Sutton G, Ng PC, Feuk L, Halpern AL, Walenz BP, et al. The diploid genome sequence of an individual human. PLoS Biol. 2007;5(10):e254.","journal-title":"PLoS Biol"},{"issue":"5683","key":"5297_CR4","doi-asserted-by":"publisher","first-page":"525","DOI":"10.1126\/science.1098918","volume":"305","author":"J Sebat","year":"2004","unstructured":"Sebat J, Lakshmi B, Troge J, Alexander J, Young J, Lundin P, et al. Large-scale copy number polymorphism in the human genome. Science. 2004;305(5683):525\u20138.","journal-title":"Science"},{"issue":"9","key":"5297_CR5","doi-asserted-by":"publisher","first-page":"949","DOI":"10.1038\/ng1416","volume":"36","author":"AJ Iafrate","year":"2004","unstructured":"Iafrate AJ, Feuk L, Rivera MN, Listewnik ML, Donahoe PK, Qi Y, et al. Detection of large-scale variation in the human genome. Nat Genet. 2004;36(9):949\u201351.","journal-title":"Nat Genet"},{"issue":"11","key":"5297_CR6","doi-asserted-by":"publisher","first-page":"1698","DOI":"10.1101\/gr.082016.108","volume":"18","author":"GH Perry","year":"2008","unstructured":"Perry GH, Yang F, Marques-Bonet T, Murphy C, Fitzgerald T, Lee AS, et al. Copy number variation and evolution in humans and chimpanzees. Genome Res. 2008;18(11):1698\u2013710.","journal-title":"Genome Res"},{"issue":"6","key":"5297_CR7","doi-asserted-by":"publisher","first-page":"512","DOI":"10.1038\/nbt.1852","volume":"29","author":"D Pinto","year":"2011","unstructured":"Pinto D, Darvishi K, Shi X, Rajan D, Rigler D, Fitzgerald T, et al. Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants. Nat Biotechnol. 2011;29(6):512\u201320.","journal-title":"Nat Biotechnol"},{"key":"5297_CR8","doi-asserted-by":"publisher","first-page":"444","DOI":"10.1038\/nature05329","volume":"444","author":"R Redon","year":"2006","unstructured":"Redon R, Ishikawa S, Fitch KR, Feuk L, Perry GH, Andrews TD, et al. Global variation in copy number in the human genome. Nature. 2006;444:444\u201354.","journal-title":"Nature"},{"issue":"3","key":"5297_CR9","doi-asserted-by":"publisher","first-page":"172","DOI":"10.1038\/nrg3871","volume":"16","author":"M Zarrei","year":"2015","unstructured":"Zarrei M, MacDonald JR, Merico D, Scherer SW. A copy number variation map of the human genome. Nat Rev Genet. 2015;16(3):172\u201383.","journal-title":"Nat Rev Genet"},{"issue":"4","key":"5297_CR10","doi-asserted-by":"publisher","first-page":"881","DOI":"10.1007\/s10157-018-1534-x","volume":"22","author":"C Nagano","year":"2018","unstructured":"Nagano C, Nozu K, Morisada N, Yazawa M, Ichikawa D, Numasawa K, et al. Detection of copy number variations by pair analysis using next-generation sequencing data in inherited kidney diseases. Clin Exp Nephrol. 2018;22(4):881\u20138.","journal-title":"Clin Exp Nephrol"},{"issue":"2","key":"5297_CR11","doi-asserted-by":"publisher","first-page":"207","DOI":"10.1038\/2524","volume":"20","author":"D Pinkel","year":"1998","unstructured":"Pinkel D, Segraves R, Sudar D, Clark S, Poole I, Kowbel D, et al. High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat Genet. 1998;20(2):207\u201311.","journal-title":"Nat Genet"},{"issue":"5","key":"5297_CR12","doi-asserted-by":"publisher","first-page":"503","DOI":"10.1111\/j.1365-2052.2012.02317.x","volume":"43","author":"A Clop","year":"2012","unstructured":"Clop A, Vidal O, Amills M. Copy number variation in the genomes of domestic animals. Anim Genet. 2012;43(5):503\u201317.","journal-title":"Anim Genet"},{"issue":"3","key":"5297_CR13","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1001332","volume":"7","author":"M Olsson","year":"2011","unstructured":"Olsson M, Meadows JRS, Truv\u00e9 K, Pielberg GR, Puppo F, Mauceli E, et al. A novel unstable duplication upstream of HAS2 predisposes to a breed-defining skin phenotype and a periodic fever syndrome in Chinese Shar-Pei dogs. PLoS Genet. 2011;7(3):e1001332.","journal-title":"PLoS Genet"},{"issue":"3","key":"5297_CR14","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1003409","volume":"9","author":"DM Karyadi","year":"2013","unstructured":"Karyadi DM, Karlins E, Decker B, vonHoldt BM, Carpintero-Ramirez G, Parker HG, et al. A copy number variant at the KITLG locus likely confers risk for canine squamous cell carcinoma of the digit. PLoS Genet. 2013;9(3):e1003409.","journal-title":"PLoS Genet"},{"issue":"4","key":"5297_CR15","doi-asserted-by":"publisher","first-page":"778","DOI":"10.1101\/gr.133967.111","volume":"22","author":"DM Bickhart","year":"2012","unstructured":"Bickhart DM, Hou Y, Schroeder SG, Alkan C, Cardone MF, Matukumalli LK, et al. Copy number variation of individual cattle genomes using next-generation sequencing. Genome Res. 2012;22(4):778\u201390.","journal-title":"Genome Res"},{"issue":"1","key":"5297_CR16","doi-asserted-by":"publisher","first-page":"7","DOI":"10.1139\/gen-2017-0016","volume":"61","author":"SS Sohrabi","year":"2018","unstructured":"Sohrabi SS, Mohammadabadi M, Wu D, Esmailizadeh A. Detection of breed-specific copy number variations in domestic chicken genome. Genome. 2018;61(1):7\u201314.","journal-title":"Genome"},{"issue":"3","key":"5297_CR17","doi-asserted-by":"publisher","DOI":"10.1038\/sdata.2016.75","volume":"13","author":"B Harr","year":"2016","unstructured":"Harr B, Karakoc E, Neme R, Teschke M, Pfeifle C, Pezer \u017d, et al. Genomic esources for wild populations of the house mouse, Mus musculus and its close relative Mus spretus. Sci Data. 2016;13(3):160075.","journal-title":"Sci Data"},{"issue":"1","key":"5297_CR18","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1004016","volume":"10","author":"AH Freedman","year":"2014","unstructured":"Freedman AH, Gronau I, Schweizer RM, Ortega-Del Vecchyo D, Han E, Silva PM, et al. Genome sequencing highlights the dynamic early history of dogs. PLoS Genet. 2014;10(1):e1004016.","journal-title":"PLoS Genet"},{"issue":"2","key":"5297_CR19","doi-asserted-by":"publisher","first-page":"203","DOI":"10.1007\/s13353-018-0436-7","volume":"59","author":"MVA Lemos de","year":"2018","unstructured":"de Lemos MVA, Peripolli E, Berton MP, Feitosa FLB, Olivieri BF, Stafuzza NB, et al. Association study between copy number variation and beef fatty acid profile of Nellore cattle. J Appl Genet. 2018;59(2):203\u201323.","journal-title":"J Appl Genet"},{"key":"5297_CR20","doi-asserted-by":"publisher","first-page":"7024","DOI":"10.1038\/s41598-018-25438-0","volume":"8","author":"B Gandolfi","year":"2018","unstructured":"Gandolfi B, Alhaddad H, Abdi M, Bach LH, Creighton EK, Davis BW, et al. Applications and efficiencies of the first cat 63K DNA array. Sci Rep. 2018;8:7024.","journal-title":"Sci Rep"},{"issue":"2","key":"5297_CR21","doi-asserted-by":"publisher","first-page":"539","DOI":"10.1111\/jvim.14599","volume":"31","author":"DA Mauler","year":"2017","unstructured":"Mauler DA, Gandolfi B, Reinero CR, O'Brien DP, Spooner JL, Lyons LA, et al. Precision medicine in cats: novel Niemann-pick type C1 diagnosed by whole-genome sequencing. J Vet Intern Med. 2017;31(2):539\u201344.","journal-title":"J Vet Intern Med"},{"issue":"6","key":"5297_CR22","doi-asserted-by":"publisher","first-page":"711","DOI":"10.1111\/age.12350","volume":"46","author":"B Gandolfi","year":"2015","unstructured":"Gandolfi B, Grahn RA, Creighton EK, Williams DC, Dickinson PJ, Sturges BK, et al. COLQ variant associated with Devon rex and Sphynx feline hereditary myopathy. Anim Genet. 2015;46(6):711\u20135.","journal-title":"Anim Genet"},{"issue":"1\u20132","key":"5297_CR23","doi-asserted-by":"publisher","first-page":"47","DOI":"10.1007\/s00335-016-9668-1","volume":"28","author":"D Aberdein","year":"2017","unstructured":"Aberdein D, Munday JS, Gandolfi B, Dittmer KE, Malik R, Garrick DJ, et al. A FAS-ligand variant associated with autoimmune lymphoproliferative syndrome in cats. Mamm Genome. 2017;28(1\u20132):47\u201355.","journal-title":"Mamm Genome"},{"key":"5297_CR24","doi-asserted-by":"publisher","DOI":"10.1038\/srep43918","volume":"7","author":"A Oh","year":"2017","unstructured":"Oh A, Pearce JW, Gandolfi B, Creighton EK, Suedmeyer WK, Selig M, et al. Early-onset progressive retinal atrophy associated with an IQCB1 variant in African black-footed cats (Felis nigripes). Sci Rep. 2017;7:43918.","journal-title":"Sci Rep"},{"issue":"11","key":"5297_CR25","doi-asserted-by":"publisher","first-page":"1675","DOI":"10.1101\/gr.6380007","volume":"17","author":"JU Pontius","year":"2007","unstructured":"Pontius JU, Mullikin JC, Smith DR. Agencourt sequencing team, Lindblad-Toh K, Gnerre set al. Initial sequence and comparative analysis of the cat genome. Genome Res. 2007;17(11):1675\u201389.","journal-title":"Genome Res"},{"issue":"9","key":"5297_CR26","doi-asserted-by":"publisher","first-page":"e69","DOI":"10.1093\/nar\/gks003","volume":"40","author":"G Klambauer","year":"2012","unstructured":"Klambauer G, Schwarzbauer K, Mayr A, Clevert DA, Mitterecker A, Bodenhofer U, et al. Cn.MOPS: mixture of Poissons for discovering copy number variations in next-generation sequencing data with a low false discovery rate. Nucleic Acids Res. 2012;40(9):e69.","journal-title":"Nucleic Acids Res"},{"issue":"6","key":"5297_CR27","doi-asserted-by":"publisher","first-page":"974","DOI":"10.1101\/gr.114876.110","volume":"21","author":"A Abyzov","year":"2011","unstructured":"Abyzov A, Urban AE, Snyder M, Gerstein M. CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing. Genome Res. 2011;21(6):974\u201384.","journal-title":"Genome Res"},{"key":"5297_CR28","doi-asserted-by":"publisher","first-page":"138","DOI":"10.3389\/fgene.2015.00138","volume":"6","author":"M Pirooznia","year":"2015","unstructured":"Pirooznia M, Goes FS, Zandi PP. Whole-genome CNV analysis: advances in computational approaches. Front Genet. 2015;6:138.","journal-title":"Front Genet"},{"issue":"6","key":"5297_CR29","doi-asserted-by":"publisher","first-page":"841","DOI":"10.1093\/bioinformatics\/btq033","volume":"26","author":"AR Quinlan","year":"2010","unstructured":"Quinlan AR, Hall IM. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics. 2010;26(6):841\u20132.","journal-title":"Bioinformatics"},{"key":"5297_CR30","doi-asserted-by":"publisher","first-page":"262","DOI":"10.1186\/1471-2164-14-262","volume":"14","author":"M Tian","year":"2013","unstructured":"Tian M, Wang Y, Gu X, Feng C, Fang S, Hu X, et al. Copy number variants in locally raised Chinese chicken genomes determined using array comparative genomic hybridization. BMC Genomics. 2013;14:262.","journal-title":"BMC Genomics"},{"issue":"12","key":"5297_CR31","doi-asserted-by":"publisher","first-page":"1540","DOI":"10.1093\/bioinformatics\/btl117","volume":"22","author":"S Ryota","year":"2006","unstructured":"Ryota S, Hidetoshi S. Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics. 2006;22(12):1540\u20132.","journal-title":"Bioinformatics"},{"issue":"1","key":"5297_CR32","first-page":"9","volume":"4","author":"\u00d8 Hammer","year":"2001","unstructured":"Hammer \u00d8, Harper DAT, Ryan PDPAST. Paleontological statistics software package for education and data analysis. Palaeontol Electron. 2001;4(1):9.","journal-title":"Palaeontol Electron"},{"issue":"2","key":"5297_CR33","first-page":"143","volume":"2","author":"BS Shastry","year":"2009","unstructured":"Shastry BS. Copy number variation and susceptibility to human disorders. Mol Med Rep. 2009;2(2):143\u20137.","journal-title":"Mol Med Rep"},{"key":"5297_CR34","doi-asserted-by":"publisher","first-page":"13","DOI":"10.1186\/2047-217X-3-13","volume":"3","author":"G Tamazian","year":"2014","unstructured":"Tamazian G, Simonov S, Dobrynin P, Makunin A, Logachev A, Komissarov A, et al. Annotated features of domestic cat \u2013 Felis catus genome. Gigascience. 2014;3:13.","journal-title":"Gigascience"},{"issue":"1","key":"5297_CR35","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0016327","volume":"6","author":"CA Miller","year":"2011","unstructured":"Miller CA, Hampton O, Coarfa C, Milosavljevic A. ReadDepth: a parallel R package for detecting copy number alterations from short sequencing reads. PLoS One. 2011;6(1):e16327.","journal-title":"PLoS One"},{"issue":"1","key":"5297_CR36","doi-asserted-by":"publisher","first-page":"106","DOI":"10.1101\/gr.080069.108","volume":"19","author":"LY Wang","year":"2009","unstructured":"Wang LY, Abyzov A, Korbel JO, Snyder M, Gerstein MMSB. A mean-shift-based approach for the analysis of structural variation in the genome. Genome Res. 2009;19(1):106\u201317.","journal-title":"Genome Res"},{"issue":"5","key":"5297_CR37","doi-asserted-by":"publisher","first-page":"899","DOI":"10.1101\/gr.128991.111","volume":"22","author":"R Doan","year":"2012","unstructured":"Doan R, Cohen N, Harrington J, Veazey K, Juras R, Cothran G, et al. Identification of copy number variants in horses. Genome Res. 2012;22(5):899\u2013907.","journal-title":"Genome Res"},{"issue":"6","key":"5297_CR38","doi-asserted-by":"publisher","first-page":"1253","DOI":"10.1534\/g3.115.018473","volume":"5","author":"J Wang","year":"2015","unstructured":"Wang J, Jiang J, Wang H, Kang H, Zhang Q, Liu JF. Improved detection and characterization of copy number variations among diverse pig breeds by array CGH. G3 (Bethesda). 2015;5(6):1253\u201361.","journal-title":"G3 (Bethesda)"},{"issue":"1","key":"5297_CR39","doi-asserted-by":"publisher","first-page":"977","DOI":"10.1186\/s12864-017-4318-x","volume":"18","author":"A Serres-Armero","year":"2017","unstructured":"Serres-Armero A, Povolotskaya IS, Quilez J, Ramirez O, Santpere G, Kuderna LFK, et al. Similar genomic proportions of copy number variation within gray wolves and modern dog breeds inferred from whole genome sequencing. BMC Genomics. 2017;18(1):977.","journal-title":"BMC Genomics"},{"issue":"15","key":"5297_CR40","doi-asserted-by":"publisher","first-page":"210","DOI":"10.1186\/1471-2164-15-210","volume":"19","author":"AM Molin","year":"2014","unstructured":"Molin AM, Berglund J, Webster MT, Lindblad-Toh K. Genome-wide copy number variant discovery in dogs using the CanineHD genotyping array. BMC Genomics. 2014;19(15):210.","journal-title":"BMC Genomics"},{"issue":"1","key":"5297_CR41","doi-asserted-by":"publisher","first-page":"183","DOI":"10.1186\/s12862-017-1025-9","volume":"17","author":"SM McNew","year":"2017","unstructured":"McNew SM, Beck D, Sadler-Riggleman I, Knutie SA, Koop JAH, Clayton DH, et al. Epigenetic variation between urban and rural populations of Darwin\u2019s finches. BMC Evol Biol. 2017;17(1):183.","journal-title":"BMC Evol Biol"},{"key":"5297_CR42","doi-asserted-by":"publisher","first-page":"131","DOI":"10.1186\/1471-2164-14-131","volume":"14","author":"L Jiang","year":"2013","unstructured":"Jiang L, Jiang J, Yang J, Liu X, Wang J, Wang H, et al. Genome-wide detection of copy number variations using high-density SNP genotyping platforms in Holsteins. BMC Genomics. 2013;14:131.","journal-title":"BMC Genomics"},{"issue":"1","key":"5297_CR43","doi-asserted-by":"publisher","first-page":"265","DOI":"10.1186\/s12864-017-3636-3","volume":"18","author":"Y Gao","year":"2017","unstructured":"Gao Y, Jiang J, Yang S, Hou Y, Liu GE, Zhang S, et al. CNV discovery for milk composition traits in dairy cattle using whole genome resequencing. BMC Genomics. 2017;18(1):265.","journal-title":"BMC Genomics"},{"key":"5297_CR44","doi-asserted-by":"publisher","first-page":"962","DOI":"10.1186\/1471-2164-15-962","volume":"15","author":"G Yi","year":"2014","unstructured":"Yi G, Qu L, Liu J, Yan Y, Xu G, Yang N. Genome-wide patterns of copy number variation in the diversified chicken genomes using next-generation sequencing. BMC Genomics. 2014;15:962.","journal-title":"BMC Genomics"},{"key":"5297_CR45","doi-asserted-by":"publisher","first-page":"934","DOI":"10.1186\/1471-2164-15-934","volume":"15","author":"R Han","year":"2014","unstructured":"Han R, Yang P, Tian Y, Wang D, Zhang Z, Wang L, et al. Identification and functional characterization of copy number variations in diverse chicken breeds. BMC Genomics. 2014;15:934.","journal-title":"BMC Genomics"},{"key":"5297_CR46","doi-asserted-by":"publisher","first-page":"153","DOI":"10.1016\/j.livsci.2016.08.006","volume":"191","author":"RTMM Prinsen","year":"2016","unstructured":"Prinsen RTMM, Strillacci MG, Schiavini F, Santus E, Rossoni A, Maurer V, et al. A genome-wide scan of copy number variants using high-density SNPs in Brown Swiss dairy cattle. Livest Sci. 2016;191:153\u201360.","journal-title":"Livest Sci"},{"key":"5297_CR47","doi-asserted-by":"publisher","first-page":"77","DOI":"10.1186\/s12711-017-0352-z","volume":"49","author":"R Letaief","year":"2017","unstructured":"Letaief R, Rebours E, Grohs C, Meersseman C, Fritz S, Trouilh L, et al. Identification of copy number variation in French dairy and beef breeds using next-generation sequencing. Genet Sel Evol. 2017;49:77.","journal-title":"Genet Sel Evol"},{"issue":"1","key":"5297_CR48","doi-asserted-by":"publisher","first-page":"12","DOI":"10.1016\/j.ygeno.2007.10.009","volume":"91","author":"MJ Lipinski","year":"2008","unstructured":"Lipinski MJ, Froenicke L, Baysac KC, Billings NC, Leutenegger CM, Levy AM, et al. The ascent of cat breeds: genetic evaluations of breeds and worldwide random bred populations. Genomics. 2008;91(1):12\u201321.","journal-title":"Genomics"},{"key":"5297_CR49","doi-asserted-by":"publisher","first-page":"466","DOI":"10.1007\/BF00122078","volume":"42","author":"R Robinson","year":"1971","unstructured":"Robinson R. The rex mutants of the domestic cat. Genetica. 1971;42:466.","journal-title":"Genetica"},{"key":"5297_CR50","volume-title":"Handbook of genetics","author":"R Robinson","year":"1975","unstructured":"Robinson R. The domestic cat, Felis catus. In: King RC, editor. Handbook of genetics. Boston: Springer; 1975."},{"issue":"2","key":"5297_CR51","doi-asserted-by":"publisher","first-page":"228","DOI":"10.1016\/j.ajhg.2008.07.005","volume":"83","author":"JM Young","year":"2008","unstructured":"Young JM, Endicott RM, Parghi SS, Walker M, Kidd JM, Trask BJ. Extensive copy-number variation of the human olfactory receptor gene family. Am J Hum Genet. 2008;83(2):228\u201342.","journal-title":"Am J Hum Genet"},{"key":"5297_CR52","doi-asserted-by":"publisher","first-page":"146","DOI":"10.1186\/1746-6148-10-146","volume":"10","author":"A Mori","year":"2014","unstructured":"Mori A, Kappen KL, Dilger AC, Swanson KS. Effect of photoperiod on the feline adipose transcriptome as assessed by RNA sequencing. BMC Vet Res. 2014;10:146.","journal-title":"BMC Vet Res"},{"issue":"48","key":"5297_CR53","doi-asserted-by":"publisher","first-page":"17230","DOI":"10.1073\/pnas.1410083111","volume":"111","author":"MJ Montague","year":"2014","unstructured":"Montague MJ, Li G, Gandolfi B, Khan R, Aken BL, Searle SM, et al. Comparative analysis of the domestic cat genome reveals genetic signatures underlying feline biology and domestication. Proc Natl Acad Sci U S A. 2014;111(48):17230\u20135.","journal-title":"Proc Natl Acad Sci U S A"},{"key":"5297_CR54","doi-asserted-by":"publisher","first-page":"45","DOI":"10.1186\/1471-2350-12-45","volume":"12","author":"MMG Seno","year":"2011","unstructured":"Seno MMG, Kwan BYM, Lee-Ng KKM, Moessner R, Lionel AC, Marshall CR, Scherer SW. Human PTCHD3 nulls: rare copy number and sequence variants suggest a non-essential gene. BMC Medical Genetics. 2011;12:45.","journal-title":"BMC Medical Genetics"},{"issue":"46","key":"5297_CR55","doi-asserted-by":"publisher","first-page":"80492","DOI":"10.18632\/oncotarget.19287","volume":"8","author":"Y Yamada","year":"2017","unstructured":"Yamada Y, Sakuma J, Takeuchi I, Yasukochi Y, Kato K, Oguri M, et al. Identification of five genetic variants as novel determinants of type 2 diabetes mellitus in Japanese by exome-wide association studies. Oncotarget. 2017;8(46):80492\u2013505.","journal-title":"Oncotarget"},{"issue":"2","key":"5297_CR56","doi-asserted-by":"publisher","first-page":"13","DOI":"10.3390\/epigenomes1020013","volume":"1","author":"A Bonaldi","year":"2017","unstructured":"Bonaldi A, Kashiwabara A, de Ara\u00fajo \u00c9S, Pereira LV, Paschoal AR, Andozia MB. Mining novel candidate imprinted genes using genome-wide methylation screening and literature review. Epigenomes. 2017;1(2):13.","journal-title":"Epigenomes"},{"key":"5297_CR57","doi-asserted-by":"publisher","first-page":"454","DOI":"10.1186\/s12864-016-2752-9","volume":"17","author":"JM Silva da","year":"2016","unstructured":"da Silva JM, Giachetto PF, da Silva LO, Cintra LC, Paiva SR, Yamagishi MEB, et al. Genome-wide copy number variation (CNV) detection in Nelore cattle reveals highly frequent variants in genome regions harboring QTLs affecting production traits. BMC Genomics. 2016;17:454.","journal-title":"BMC Genomics"}],"container-title":["BMC Genomics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12864-018-5297-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/s12864-018-5297-2\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12864-018-5297-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,12,9]],"date-time":"2019-12-09T19:07:18Z","timestamp":1575918438000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcgenomics.biomedcentral.com\/articles\/10.1186\/s12864-018-5297-2"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,12]]},"references-count":57,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2018,12]]}},"alternative-id":["5297"],"URL":"https:\/\/doi.org\/10.1186\/s12864-018-5297-2","relation":{},"ISSN":["1471-2164"],"issn-type":[{"type":"electronic","value":"1471-2164"}],"subject":[],"published":{"date-parts":[[2018,12]]},"assertion":[{"value":"12 July 2018","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"21 November 2018","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"10 December 2018","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"Not applicable as all the whole genome sequence data were made available by the 99Lives Consortium.","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethics approval and consent to participate"}},{"value":"Not applicable.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent for publication"}},{"value":"The authors declare that they have no competing interests.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}},{"value":"Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.","order":4,"name":"Ethics","group":{"name":"EthicsHeading","label":"Publisher\u2019s Note"}}],"article-number":"895"}}