{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,19]],"date-time":"2026-09-19T02:35:53Z","timestamp":1789785353406,"version":"4.0.1"},"reference-count":33,"publisher":"The Endocrine Society","issue":"5","license":[{"start":{"date-parts":[[2023,12,8]],"date-time":"2023-12-08T00:00:00Z","timestamp":1701993600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100004191","name":"Novo Nordisk A\/S","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100004191","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2024,4,19]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Context<\/jats:title>\n                  <jats:p>The pretreatment blood transcriptome predicts growth response to daily growth hormone (GH) therapy with high accuracy.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Objective<\/jats:title>\n                  <jats:p>Investigate response prediction using pretreatment transcriptome in children with GH deficiency (GHD) treated with once-weekly somapacitan, a novel long-acting GH.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Methods<\/jats:title>\n                  <jats:p>REAL4 is a randomized, multinational, open-label, active-controlled parallel group phase 3 trial, comprising a 52-week main phase and an ongoing 3-year safety extension (NCT03811535). A total of 128\/200 treatment-na\u00efve prepubertal children with GHD consented to baseline blood transcriptome profiling. They were randomized 2:1 to subcutaneous somapacitan (0.16\u2005mg\/kg\/week) or daily GH (0.034\u2005mg\/kg\/day). Differential RNA-seq analysis and machine learning were used to predict therapy response.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Results<\/jats:title>\n                  <jats:p>121\/128 samples passed quality control. Children treated with somapacitan (n = 76) or daily GH (n = 45) were categorized based on fastest and slowest growing quartiles at week 52. Prediction of height velocity (HV; cm\/year) was excellent for both treatments (out of bag [OOB] area under curve [AUC]: 0.98-0.99; validation AUC: 0.83-0.84), as was prediction of secondary markers of growth response: HV standard deviation score (SDS) (0.99-1.0; 0.75-0.78), change from baseline height SDS (\u0394HSDS) (0.98-1.0; 0.61-0.75), and change from baseline insulin-like growth factor-I SDS (\u0394IGF-I SDS) (0.96-1.0; 0.85-0.88). Genes previously identified as predictive of GH therapy response were consistently better at predicting the fastest growers in both treatments in this study (OOB AUC: 0.93-0.97) than the slowest (0.67-0.85).<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Conclusion<\/jats:title>\n                  <jats:p>Pretreatment transcriptome predicts first-year growth response in somapacitan-treated children with GHD. A common set of genes can predict the treatment response to both once-weekly somapacitan and conventional daily GH. This approach could potentially be developed into a clinically applicable pretreatment test to improve clinical management.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1210\/clinem\/dgad717","type":"journal-article","created":{"date-parts":[[2023,12,9]],"date-time":"2023-12-09T04:15:51Z","timestamp":1702095351000},"page":"1214-1221","source":"Crossref","is-referenced-by-count":9,"title":["Gene Expression Signatures Predict First-Year Response to Somapacitan Treatment in Children With Growth Hormone Deficiency"],"prefix":"10.1210","volume":"109","author":[{"given":"Terence","family":"Garner","sequence":"first","affiliation":[{"name":"Division of Developmental Biology and Medicine, Faculty of Biology, Medicine and Health, University of Manchester and Manchester Academic Health Science Centre , Manchester, M13 9WL , UK"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1225-4537","authenticated-orcid":false,"given":"Peter","family":"Clayton","sequence":"additional","affiliation":[{"name":"Division of Developmental Biology and Medicine, Faculty of Biology, Medicine and Health, University of Manchester and Manchester Academic Health Science Centre , Manchester, M13 9WL , UK"},{"name":"Department of Paediatric Endocrinology, Royal Manchester Children's Hospital , Manchester, M13 9WL , UK"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Michael","family":"H\u00f8jby","sequence":"additional","affiliation":[{"name":"Novo Nordisk, Clinical Drug Development , 2860 S\u00f8borg , Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Philip","family":"Murray","sequence":"additional","affiliation":[{"name":"Division of Developmental Biology and Medicine, Faculty of Biology, Medicine and Health, University of Manchester and Manchester Academic Health Science Centre , Manchester, M13 9WL , UK"},{"name":"Department of Paediatric Endocrinology, Royal Manchester Children's Hospital , Manchester, M13 9WL , UK"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1950-7325","authenticated-orcid":false,"given":"Adam","family":"Stevens","sequence":"additional","affiliation":[{"name":"Division of Developmental Biology and Medicine, Faculty of Biology, Medicine and Health, University of Manchester and Manchester Academic Health Science Centre , Manchester, M13 9WL , UK"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"80","published-online":{"date-parts":[[2023,12,8]]},"reference":[{"issue":"6","key":"2024041923061443900_dgad717-B1","doi-asserted-by":"crossref","first-page":"361","DOI":"10.1159\/000452150","article-title":"Guidelines for growth hormone and insulin-like growth factor-I treatment in children and adolescents: growth hormone deficiency, idiopathic short stature, and primary insulin-like growth factor-I deficiency","volume":"86","author":"Grimberg","year":"2016","journal-title":"Horm Res Paediatr"},{"issue":"10","key":"2024041923061443900_dgad717-B2","doi-asserted-by":"crossref","first-page":"608","DOI":"10.1038\/s41574-021-00539-5","article-title":"Advances in differential diagnosis and management of growth hormone deficiency in children","volume":"17","author":"Hage","year":"2021","journal-title":"Nat Rev Endocrinol"},{"issue":"6","key":"2024041923061443900_dgad717-B3","doi-asserted-by":"crossref","first-page":"361","DOI":"10.1159\/000452150","article-title":"Guidelines for growth hormone and insulin-like growth factor-I treatment in children and adolescents: growth hormone deficiency, idiopathic short stature, and primary insulin-like growth factor-I deficiency","volume":"86","author":"Grimberg","year":"2017","journal-title":"Horm Res Paediatr"},{"issue":"5","key":"2024041923061443900_dgad717-B4","doi-asserted-by":"crossref","first-page":"421","DOI":"10.1530\/EJE-16-1024","article-title":"Early growth hormone treatment start in childhood growth hormone deficiency improves near adult height: analysis from NordiNet\u00ae international outcome study","volume":"177","author":"Polak","year":"2017","journal-title":"Eur J Endocrinol"},{"issue":"6","key":"2024041923061443900_dgad717-B5","doi-asserted-by":"crossref","first-page":"C1","DOI":"10.1530\/EJE-16-0111","article-title":"Growth Hormone Research Society perspective on the development of long-acting growth hormone preparations","volume":"174","author":"Christiansen","year":"2016","journal-title":"Eur J Endocrinol"},{"issue":"6","key":"2024041923061443900_dgad717-B6","doi-asserted-by":"crossref","first-page":"e2121","DOI":"10.1210\/clinem\/dgz149","article-title":"Long-acting growth hormone preparations\u2014current status and future considerations","volume":"105","author":"Miller","year":"2019","journal-title":"J Clin Endocrinol Metab"},{"key":"2024041923061443900_dgad717-B7","doi-asserted-by":"crossref","first-page":"8","DOI":"10.1016\/j.ghir.2017.05.006","article-title":"Nonclinical pharmacokinetic and pharmacodynamic characterisation of somapacitan: a reversible non-covalent albumin-binding growth hormone","volume":"35","author":"Thygesen","year":"2017","journal-title":"Growth Horm IGF Res"},{"issue":"1","key":"2024041923061443900_dgad717-B8","doi-asserted-by":"crossref","first-page":"19","DOI":"10.1093\/ejendo\/lvac008","article-title":"Somapacitan in children born small for gestational age: a multi-centre, open-label, controlled phase 2 study","volume":"188","author":"Juul","year":"2023","journal-title":"Eur J Endocrinol"},{"key":"2024041923061443900_dgad717-B9","doi-asserted-by":"crossref","first-page":"980979","DOI":"10.3389\/fendo.2022.980979","article-title":"What do we do now that the long-acting growth hormone is here?","volume":"13","author":"Miller","year":"2022","journal-title":"Front Endocrinol (Lausanne)"},{"issue":"2","key":"2024041923061443900_dgad717-B10","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1111\/j.1365-2265.2012.04420.x","article-title":"Identification and management of poor response to growth-promoting therapy in children with short stature","volume":"77","author":"Bang","year":"2012","journal-title":"Clin Endocrinol (Oxf)"},{"issue":"6","key":"2024041923061443900_dgad717-B11","doi-asserted-by":"crossref","first-page":"540","DOI":"10.1038\/tpj.2015.67","article-title":"Effect of summer daylight exposure and genetic background on growth in growth hormone-deficient children","volume":"16","author":"De Leonibus","year":"2016","journal-title":"Pharmacogenomics J"},{"issue":"6","key":"2024041923061443900_dgad717-B12","doi-asserted-by":"crossref","first-page":"633","DOI":"10.1530\/EJE-16-0357","article-title":"Validating genetic markers of response to recombinant human growth hormone in children with growth hormone deficiency and Turner syndrome: the PREDICT validation study","volume":"175","author":"Stevens","year":"2016","journal-title":"Eur J Endocrinol"},{"issue":"4","key":"2024041923061443900_dgad717-B13","doi-asserted-by":"crossref","first-page":"1174","DOI":"10.1210\/jcem.84.4.5634","article-title":"Derivation and validation of a mathematical model for predicting the response to exogenous recombinant human growth hormone (GH) in prepubertal children with idiopathic GH deficiency. KIGS International Board. Kabi Pharmacia International Growth study","volume":"84","author":"Ranke","year":"1999","journal-title":"J Clin Endocrinol Metab"},{"issue":"1","key":"2024041923061443900_dgad717-B14","doi-asserted-by":"crossref","first-page":"135","DOI":"10.1007\/s11154-021-09637-1","article-title":"Pharmacogenomics applied to recombinant human growth hormone responses in children with short stature","volume":"22","author":"Stevens","year":"2021","journal-title":"Rev Endocr Metab Disord"},{"key":"2024041923061443900_dgad717-B15","doi-asserted-by":"crossref","first-page":"1026187","DOI":"10.3389\/fendo.2023.1026187","article-title":"Diagnosis of childhood and adolescent growth hormone deficiency using transcriptomic data","volume":"14","author":"Garner","year":"2023","journal-title":"Front Endocrinol (Lausanne)"},{"issue":"5","key":"2024041923061443900_dgad717-B16","doi-asserted-by":"crossref","first-page":"594","DOI":"10.1038\/s41397-021-00237-5","article-title":"Gene expression signatures predict response to therapy with growth hormone","volume":"21","author":"Stevens","year":"2021","journal-title":"Pharmacogenomics J"},{"issue":"12","key":"2024041923061443900_dgad717-B17","doi-asserted-by":"crossref","first-page":"3378","DOI":"10.1210\/clinem\/dgac513","article-title":"Weekly somapacitan is effective and well tolerated in children with GH deficiency: the randomized phase 3 REAL4 trial","volume":"107","author":"Miller","year":"2022","journal-title":"J Clin Endocrinol Metab"},{"key":"2024041923061443900_dgad717-B18","author":"ICH Harmonised Tripartite Guideline"},{"key":"2024041923061443900_dgad717-B19","author":"WMA Declaration of Helsinki\u2014Ethical principles for medical research involving human subjects"},{"key":"2024041923061443900_dgad717-B20","first-page":"1","article-title":"Physical growth of Swiss children from birth to 20 years of age: first Zurich longitudinal study of growth and development","volume":"52","author":"Prader","year":"1989","journal-title":"Helv Paediatr Acta Suppl"},{"key":"2024041923061443900_dgad717-B21","first-page":"1","article-title":"2000 CDC Growth Charts for the United States: methods and development","volume":"246","author":"Kuczmarski","year":"2002","journal-title":"Vital Health Stat 11"},{"issue":"5","key":"2024041923061443900_dgad717-B22","doi-asserted-by":"crossref","first-page":"1675","DOI":"10.1210\/jc.2013-3060","article-title":"Age- and sex-specific reference intervals across life span for insulin-like growth factor binding protein 3 (IGFBP-3) and the IGF-I to IGFBP-3 ratio measured by new automated chemiluminescence assays","volume":"99","author":"Friedrich","year":"2014","journal-title":"J Clin Endocrinol Metab"},{"issue":"5","key":"2024041923061443900_dgad717-B23","doi-asserted-by":"crossref","first-page":"257","DOI":"10.1159\/000351025","article-title":"Personalized approach to growth hormone treatment: clinical use of growth prediction models","volume":"79","author":"Wit","year":"2013","journal-title":"Horm Res Paediatr"},{"key":"2024041923061443900_dgad717-B24","doi-asserted-by":"publisher","author":"Garner","DOI":"10.6084\/m9.figshare.24523651"},{"key":"2024041923061443900_dgad717-B25","doi-asserted-by":"crossref","first-page":"321","DOI":"10.1613\/jair.953","article-title":"SMOTE: synthetic minority over-sampling technique","volume":"16","author":"Chawla","year":"2002","journal-title":"J Artif Intell Res"},{"issue":"11","key":"2024041923061443900_dgad717-B26","doi-asserted-by":"crossref","first-page":"1","DOI":"10.18637\/jss.v036.i11","article-title":"Feature selection with the Boruta package","volume":"36","author":"Kursa","year":"2010","journal-title":"J Stat Softw"},{"issue":"W1","key":"2024041923061443900_dgad717-B27","doi-asserted-by":"crossref","first-page":"W199","DOI":"10.1093\/nar\/gkz401","article-title":"WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs","volume":"47","author":"Liao","year":"2019","journal-title":"Nucleic Acids Res"},{"key":"2024041923061443900_dgad717-B28","first-page":"18","article-title":"Classification and regression by random- forest","volume":"2","author":"Liaw","year":"2002","journal-title":"R News"},{"issue":"3","key":"2024041923061443900_dgad717-B29","doi-asserted-by":"crossref","first-page":"277","DOI":"10.1530\/EJE-13-0069","article-title":"A pharmacogenomic approach to the treatment of children with GH deficiency or Turner syndrome","volume":"169","author":"Clayton","year":"2013","journal-title":"Eur J Endocrinol"},{"issue":"1","key":"2024041923061443900_dgad717-B30","doi-asserted-by":"crossref","first-page":"54","DOI":"10.1038\/tpj.2013.14","article-title":"Pharmacogenomics of insulin-like growth factor-I generation during GH treatment in children with GH deficiency or Turner syndrome","volume":"14","author":"Stevens","year":"2014","journal-title":"Pharmacogenomics J"},{"issue":"7","key":"2024041923061443900_dgad717-B31","doi-asserted-by":"crossref","first-page":"e93247","DOI":"10.1172\/jci.insight.93247","article-title":"Transcriptomics and machine learning predict diagnosis and severity of growth hormone deficiency","volume":"3","author":"Murray","year":"2018","journal-title":"JCI Insight"},{"issue":"7933","key":"2024041923061443900_dgad717-B32","doi-asserted-by":"crossref","first-page":"704","DOI":"10.1038\/s41586-022-05275-y","article-title":"A saturated map of common genetic variants associated with human height","volume":"610","author":"Yengo","year":"2022","journal-title":"Nature"},{"issue":"6","key":"2024041923061443900_dgad717-B33","doi-asserted-by":"crossref","first-page":"e1010193","DOI":"10.1371\/journal.pgen.1010193","article-title":"A multi-population phenome-wide association study of genetically-predicted height in the Million Veteran Program","volume":"18","author":"Raghavan","year":"2022","journal-title":"PLoS Genet"}],"container-title":["The Journal of Clinical Endocrinology &amp; Metabolism"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/jcem\/advance-article-pdf\/doi\/10.1210\/clinem\/dgad717\/54760030\/dgad717.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/jcem\/article-pdf\/109\/5\/1214\/57285724\/dgad717.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/jcem\/article-pdf\/109\/5\/1214\/57285724\/dgad717.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,4,19]],"date-time":"2024-04-19T23:07:22Z","timestamp":1713568042000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/jcem\/article\/109\/5\/1214\/7462793"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,12,8]]},"references-count":33,"journal-issue":{"issue":"5","published-online":{"date-parts":[[2023,12,8]]},"published-print":{"date-parts":[[2024,4,19]]}},"URL":"https:\/\/doi.org\/10.1210\/clinem\/dgad717","relation":{},"ISSN":["0021-972X","1945-7197"],"issn-type":[{"value":"0021-972X","type":"print"},{"value":"1945-7197","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2024,5]]},"published":{"date-parts":[[2023,12,8]]}}}