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Agbessi, S, J Beaus\u00e9jour, and C Beaulieu. 2003. Antagonistic properties of two recombinant strains of <i>Streptomyces melanosporofaciens<\/i> obtained by intraspecific protoplast fusion. Appl Microbiol Biotechnol. 62:233-238.","DOI":"10.1007\/s00253-003-1256-0"},{"key":"2","doi-asserted-by":"crossref","unstructured":"2. Altschul, SF, TL Madden, AA Sch\u00e4ffer, J Zhang, Z Zhang, W Miller, and DJ Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.","DOI":"10.1093\/nar\/25.17.3389"},{"key":"3","doi-asserted-by":"crossref","unstructured":"3. Aouar, L, S Lerat, A Ouffroukh, A Boulahrouf, and C Beaulieu. 2012. Taxonomic identification of rhizospheric actinobacteria isolated from Algerian semi-arid soil exhibiting antagonistic activities against plant fungal pathogens. Can J Plant Pathol. 34:165-176.","DOI":"10.1080\/07060661.2012.681396"},{"key":"4","doi-asserted-by":"crossref","unstructured":"4. Bailey, BA, H Bae, MD Strem, DP Roberts, SE Thomas, J Crozier, GJ Samuels, IY Choi, and KA Holmes. 2006. Fungal and plant gene expression during the colonization of cacao seedlings by endophytic isolates of four <i>Trichoderma<\/i> species. Planta. 224:1149-1164.","DOI":"10.1007\/s00425-006-0314-0"},{"key":"5","doi-asserted-by":"crossref","unstructured":"5. Barreto, TR, CMD Silva, ACF Soares, and JT de Souza. 2008. Population densities and genetic diversity of actinomycetes associated to the rhizosphere of <i>Theobroma cacao<\/i>. Braz J Microbiol. 39:464-470.","DOI":"10.1590\/S1517-83822008000300010"},{"key":"6","doi-asserted-by":"crossref","unstructured":"6. B\u00e9rdy, J. 2005. Bioactive microbial metabolites: a personal view. J Antibiot. 58:1-26.","DOI":"10.1038\/ja.2005.1"},{"key":"7","doi-asserted-by":"crossref","unstructured":"7. Brader, G, S Compant, B Mitter, F Trognitz, and A Sessitsch. 2014. Metabolic potential of endophytic bacteria. Curr Opin Biotechnol. 27:30-37.","DOI":"10.1016\/j.copbio.2013.09.012"},{"key":"8","doi-asserted-by":"crossref","unstructured":"8. Bruno, WJ, ND Socci, and AL Halpern. 2000. Weighted neighbor joining: a likelihood-based approach to distance-based phylogeny reconstruction. Mol Biol Evol. 17:189-197.","DOI":"10.1093\/oxfordjournals.molbev.a026231"},{"key":"9","doi-asserted-by":"crossref","unstructured":"9. Clermont, N, G Legault, S Lerat, and C Beaulieu. 2010. Effect of biopolymers on geldanamycin production and biocontrol ability of <i>Streptomyces melanosporofaciens<\/i> strain EF-76. Can J Plant Pathol. 32:481-489.","DOI":"10.1080\/07060661.2010.512121"},{"key":"10","doi-asserted-by":"crossref","unstructured":"10. Cole, JR, Q Wang, JA Fish, B Chai, DM McGarrell, Y Sun, CT Brown, A Porras-Alfaro, CR Kuske, and JM Tiedje. 2014. Ribosomal Database Project: data and tools for high throughput rRNA analysis. Nucleic Acids Res. 42:D633-D642.","DOI":"10.1093\/nar\/gkt1244"},{"key":"11","doi-asserted-by":"crossref","unstructured":"11. Compant, S, B Duffy, J Nowak, C Clement, and EA Barka. 2005. Use of plant growth-promoting bacteria for biocontrol of plant diseases: principles, mechanisms of action, and future prospects. Appl Environ Microbiol. 71:4951-4959.","DOI":"10.1128\/AEM.71.9.4951-4959.2005"},{"key":"12","doi-asserted-by":"crossref","unstructured":"12. Conn, VM, AR Walker, and CMM Franco. 2008. Endophytic actinobacteria induce defense pathway in <i>Arabidopsis thaliana<\/i>. Mol Plant Microbe Interact. 21:208-218.","DOI":"10.1094\/MPMI-21-2-0208"},{"key":"13","doi-asserted-by":"crossref","unstructured":"13. Coombs, JT, and CMM Franco. 2003. Isolation and identification of actinobacteria from surface-sterilized wheat roots. Appl Environ Microbiol. 69:5603-5608.","DOI":"10.1128\/AEM.69.9.5603-5608.2003"},{"key":"14","doi-asserted-by":"crossref","unstructured":"14. Crozier, J, SE Thomas, MC Aime, HC Evans, and KA Holmes. 2006. Molecular characterization of fungal endophytic morphospecies isolated from stems and pods of <i>Theobroma cacao<\/i>. Plant Pathol. 55:783-791.","DOI":"10.1111\/j.1365-3059.2006.01446.x"},{"key":"15","unstructured":"15. Djocgoue, PF, HD Mbouobda, T Boudjeko, PO Effa, and DN Omokolo. 2011. Amino acids, carbohydrates and heritability of resistance in <i>Theobroma cacao<\/i>\/<i>Phytophthora megakarya<\/i> interaction. Phytopathol Mediterr. 50:370-383."},{"key":"16","doi-asserted-by":"crossref","unstructured":"16. Doumbou, C-L, V Akimov, and C Beaulieu. 1998. Selection and characterization of microorganisms utilizing thaxtomin A, a phytotoxin produced by <i>Streptomyces scabies<\/i>. Appl Environ Microbiol. 64:4313-4316.","DOI":"10.1128\/AEM.64.11.4313-4316.1998"},{"key":"17","doi-asserted-by":"crossref","first-page":"85","DOI":"10.7202\/706219ar","volume":"82","author":"C-L Doumbou","year":"2001","unstructured":"17. Doumbou, C-L, MKH Salove, DL Crawford, and C Beaulieu. 2001. Actinomycetes, promising tools to control plant diseases and to promote plant growth. Phytoprotection. 82:85-102.","journal-title":"Phytoprotection","ISSN":"https:\/\/id.crossref.org\/issn\/0031-9511","issn-type":"print"},{"key":"18","doi-asserted-by":"crossref","unstructured":"18. El-Tarabily, KA, and K Sivasithamparam. 2006. Non-streptomycete actinomycetes as biocontrol agents of soil-borne fungal plant pathogens and as plant growth promoters. Soil Biol Biochem. 38:1505-1520.","DOI":"10.1016\/j.soilbio.2005.12.017"},{"key":"19","doi-asserted-by":"crossref","unstructured":"19. Falc\u00e4o, LL, JO Silva-Werneck, BR Vilarinho, JP da Silva, AWV Pomella, and LH Marcellino. 2014. Antimicrobial and plant growth-promoting properties of the cacao endophyte <i>Bacillus subtilis<\/i> ALB629. J Appl Microbiol. 116:1584-1592.","DOI":"10.1111\/jam.12485"},{"key":"20","doi-asserted-by":"crossref","unstructured":"20. Goodfellow, M, Y Kumar, DP Labeda, and L Sembiring. 2007. The <i>Streptomyces violaceusniger<\/i> clade: a home for streptomycetes with rugose ornamented spores. Antonie van Leeuwenhoek. 92:173-199.","DOI":"10.1007\/s10482-007-9146-6"},{"key":"21","doi-asserted-by":"crossref","unstructured":"21. Gopalakrishnan, S, S Pande, M Sharma, P Humayun, BK Kiran, D Sandeep, MS Vidya, K Deepthi, and O Rupela. 2011. Evaluation of actinomycete isolates obtained from herbal vermicompost for biological control of <i>Fusarium<\/i> wilt of chickpea. Crop Prot. 30:1070-1078.","DOI":"10.1016\/j.cropro.2011.03.006"},{"key":"22","doi-asserted-by":"crossref","unstructured":"22. Goudjal, Y, O Toumatia, N Sabaou, M Barakate, F Mathieu, and A Zitouni. 2013. Endophytic actinomycetes from spontaneous plants of Algerian Sahara: indole-3-acetic acid production and tomato plants growth promoting activity. World J Microbiol Biotechnol. 29:1821-1829.","DOI":"10.1007\/s11274-013-1344-y"},{"key":"23","doi-asserted-by":"crossref","unstructured":"23. Hallmann, J, A Quadt-Hallmann, WF Mahaffee, and JW Kloepper. 1997. Bacterial endophytes in agricultural crops. Can J Microbiol. 43:895-914.","DOI":"10.1139\/m97-131"},{"key":"24","doi-asserted-by":"crossref","unstructured":"24. Hanada, RE, AWV Pomella, W Soberanis, LL Loguercio, and JO Pereira. 2009. Biocontrol potential of <i>Trichoderma martiale<\/i> against the black-pod disease (<i>Phytophthora palmivora<\/i>) of cacao. Biol Control. 50:143-149.","DOI":"10.1016\/j.biocontrol.2009.04.005"},{"key":"25","doi-asserted-by":"publisher","unstructured":"25. Hasegawa, S, A Meguro, M Shimizu, T Nishimura, and H Kunoh. 2006. Endophytic actinomycetes and their interactions with host plants. Actinomycetologica. 20:72-81.","DOI":"10.3209\/saj.20.72"},{"key":"26","doi-asserted-by":"crossref","unstructured":"26. Hobbs, G, CM Frazer, DCJ Gardner, JA Cullum, and SG Oliver. 1989. Dispersed growth of <i>Streptomyces<\/i> in liquid culture. Appl Microbiol Biotechnol. 31:272-277.","DOI":"10.1007\/BF00258408"},{"key":"27","doi-asserted-by":"crossref","unstructured":"27. Jasim, B, JC Jimtha, J Mathew, and EK Radhakrishnan. 2013. Plant growth promoting potential of endophytic bacteria isolated from <i>Piper nigrum<\/i>. Plant Growth Regul. 71:1-11.","DOI":"10.1007\/s10725-013-9802-y"},{"key":"28","doi-asserted-by":"crossref","unstructured":"28. Jones, KL. 1949. Fresh isolates of actinomycetes in which the presence of sporogenous aerial mycelia is a fluctuating characteristic. J Bacteriol. 57:141-145.","DOI":"10.1128\/JB.57.2.141-145.1949"},{"key":"29","doi-asserted-by":"crossref","unstructured":"29. Kaewkla, O, and CMM Franco. 2013. Rational approaches to improving the isolation of endophytic actinobacteria from Australian native trees. Microb Ecol. 65:384-393.","DOI":"10.1007\/s00248-012-0113-z"},{"key":"30","doi-asserted-by":"crossref","unstructured":"30. Lee, S, M Flores-Encarnacion, M Contreras-Zentella, L Garcia-Flores, JE Escamilla, and C Kennedy. 2004. Indole-3-acetic acid biosynthesis is deficient in <i>Gluconacetobacter diazotrophicus<\/i> strains with mutations in cytochrome C biogenesis genes. J Bacteriol. 186:5384-5391.","DOI":"10.1128\/JB.186.16.5384-5391.2004"},{"key":"31","doi-asserted-by":"crossref","unstructured":"31. Legault, GS, S Lerat, P Nicolas, and C Beaulieu. 2011. Tryptophan regulates thaxtomin A and indole-3-acetic acid production in <i>Streptomyces scabiei<\/i> and modifies its interactions with radish seedlings. Phytopathology. 101:1045-1051.","DOI":"10.1094\/PHYTO-03-11-0064"},{"key":"32","unstructured":"32. Leite, HAC, AB Silva, FP Gomes, KP Gramacho, JC Faria, JT De Souza, and LL Loguercio. 2013. <i>Bacillus subtilis<\/i> and <i>Enterobacter cloacae<\/i> endophytes from healthy <i>Theobroma cacao<\/i> L. trees can systemically colonize seedlings and promote growth. Appl Microbiol Biotechnol. 97:2639-2651."},{"key":"33","doi-asserted-by":"crossref","unstructured":"33. Lerat, S, M Forest, A Lauzier, G Grondin, S Lacelle, and C Beaulieu. 2012. Potato suberin induces differentiation and secondary metabolism in the genus <i>Streptomyces<\/i>. Microbes Environ. 27:36-42.","DOI":"10.1264\/jsme2.ME11282"},{"key":"34","doi-asserted-by":"crossref","unstructured":"34. Li, J, GZ Zhao, HH Chen, HB Wang, S Qin, WY Zhu, LH Xu, CL Jiang, and WJ Li. 2008. Antitumour and antimicrobial activities of endophytic streptomycetes from pharmaceutical plants in rainforest. Lett Appl Microbiol. 47:574-580.","DOI":"10.1111\/j.1472-765X.2008.02470.x"},{"key":"35","doi-asserted-by":"crossref","unstructured":"35. Lipski, A, and K Altendorf. 1995. <i>Actinomadura nitritigenes<\/i> sp. nov., isolated from experimental biofilters. Int J Syst Bacteriol. 45:717-723.","DOI":"10.1099\/00207713-45-4-717"},{"key":"36","doi-asserted-by":"crossref","unstructured":"36. Lodewyckx, C, J Vangronsveld, F Porteous, ERB Moore, S Taghavi, M Mezeay, and D van der Lelie. 2002. Endophytic bacteria and their potential applications. Crit Rev Plant Sci. 21:583-606.","DOI":"10.1080\/0735-260291044377"},{"key":"37","doi-asserted-by":"crossref","unstructured":"37. Macagnan, D, RDS Romeiro, JT de Souza, and AWV Pomella. 2006. Isolation of actinomycetes and endospore-forming bacteria from the cacao pod surface and their antagonistic activity against the witches\u2019 broom and black pod pathogens. Phytoparasitica. 34:122-132.","DOI":"10.1007\/BF02981312"},{"key":"38","doi-asserted-by":"crossref","unstructured":"38. Martinez, JL, F Baquero, and DI Anderson. 2007. Predicting antibiotic resistance. Nat Rev Microbiol. 5:958-965.","DOI":"10.1038\/nrmicro1796"},{"key":"39","doi-asserted-by":"crossref","unstructured":"39. Mej\u00eda, LC, EI Rojas, Z Maynard, SV Bael, AE Arnold, P Hebbar, GJ Samuels, N Robbins, and EA Herre. 2008. Endophytic fungi as biocontrol agents of <i>Theobroma cacao<\/i> pathogens. Biol Control. 46:4-14.","DOI":"10.1016\/j.biocontrol.2008.01.012"},{"key":"40","unstructured":"40. Melnick, RL, NK Zidack, BA Bailey, SN Maximova, M Guiltinan, and PA Backman. 2008. Bacterial endophytes: <i>Bacillus<\/i> spp. from annual crops as potential biological control agents of black pod rot of cacao. Biol Control. 46:46-56."},{"key":"41","doi-asserted-by":"crossref","unstructured":"41. Melnick, RL, C Su\u00e1rez, BA Bailey, and PA Backman. 2011. Isolation of endophytic endospore-forming bacteria from <i>Theobroma cacao<\/i> as potential biological control agents of cacao diseases. Biol Control. 57:236-245.","DOI":"10.1016\/j.biocontrol.2011.03.005"},{"key":"42","doi-asserted-by":"crossref","unstructured":"42. Monciardini, P, M Sosio, L Cavaletti, C Chiocchini, and S Donadio. 2002. New PCR primers for the selective amplification of 16S rDNA from different groups of actinomycetes. FEMS Microbiol Ecol. 42:419-429.","DOI":"10.1016\/S0168-6496(02)00353-7"},{"key":"43","doi-asserted-by":"crossref","unstructured":"43. Palaniyandi, SA, SH Yang, L Zhang, and J-W Suh. 2013. Effects of actinobacteria on plant disease suppression and growth promotion. Appl Microbiol Biotechnol. 97:9621-9636.","DOI":"10.1007\/s00253-013-5206-1"},{"key":"44","doi-asserted-by":"crossref","unstructured":"44. Paradis, E, C Goyer, NC Hodge, R Hogue, RE Stall, and C Beaulieu. 1994. Fatty acid and protein profiles of <i>Streptomyces scabies<\/i> strains isolated in eastern Canada. Int J Sys Bacteriol. 44:561-564.","DOI":"10.1099\/00207713-44-3-561"},{"key":"45","doi-asserted-by":"crossref","unstructured":"45. Patten, CL, and BR Glick. 2002. The role of bacterial indoleacetic acid in the development of the host plant root system. Appl Environ Microbiol. 68:3795-3801.","DOI":"10.1128\/AEM.68.8.3795-3801.2002"},{"key":"46","doi-asserted-by":"crossref","unstructured":"46. Penrose, DM, and BR Glick. 2003. Methods for isolating and characterizing ACC deaminase-containing plant growth-promoting rhizobacteria. Physiol Plant. 118:10-15.","DOI":"10.1034\/j.1399-3054.2003.00086.x"},{"key":"47","doi-asserted-by":"crossref","unstructured":"47. Pospiech, A, and B Neuman. 1995. A versatile quick-prep of genomic DNA from gram-positive bacteria. Trends Genet. 11:217-218.","DOI":"10.1016\/S0168-9525(00)89052-6"},{"key":"48","doi-asserted-by":"crossref","unstructured":"48. Qin, S, J Li, HH Chen, GZ Zhao, WY Zhu, CL Jiang, LH Xu, and WJ Li. 2009. Isolation, diversity, and antimicrobial activity of rare actinobacteria from medicinal plants of tropical rain forests in Xishuangbanna, China. Appl Environ Microbiol. 75:6176-6186.","DOI":"10.1128\/AEM.01034-09"},{"key":"49","doi-asserted-by":"crossref","unstructured":"49. Qin, S, K Xing, JH Jiang, LH Xu, and WJ Li. 2011. Biodiversity, bioactive natural products and biotechnological potential of plant-associated endophytic actinobacteria. Appl Microbiol Biotechnol. 89:457-473.","DOI":"10.1007\/s00253-010-2923-6"},{"key":"50","unstructured":"50. R Core Team. 2014. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. URL http:\/\/www.R-project.org\/."},{"key":"51","doi-asserted-by":"crossref","unstructured":"51. Sarwar, M, M Arshad, DA Martens, and WT Frankenberger, Jr. 1992. Tryptophan-dependent biosynthesis of auxins in soil. Plant Soil. 147:207-215.","DOI":"10.1007\/BF00029072"},{"key":"52","doi-asserted-by":"crossref","unstructured":"52. Schwyn, R, and JB Neilands. 1987. Universal chemical assay for detection and determination of siderophores. Anal Biochem. 160:47-56.","DOI":"10.1016\/0003-2697(87)90612-9"},{"key":"53","doi-asserted-by":"crossref","unstructured":"53. Sessitsch, ARB, and G Berg. 2004. Endophytic bacterial communities of field-grown potato plants and their plant-growth promoting and antagonistic abilities. Can J Microbiol. 50:239-249.","DOI":"10.1139\/w03-118"},{"key":"54","doi-asserted-by":"crossref","unstructured":"54. Sessitsch, A, P Hardoim, J D\u00f6ring, et al. 2012. Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis. Mol Plant Microbe Interact. 25:28-36.","DOI":"10.1094\/MPMI-08-11-0204"},{"key":"55","unstructured":"55. Shimizu, M, Y Nakagawa, Y Sato, T Furamai, Y Igarashi, H Onaka, R Yoshida, and H Kunch. 2000. Studies on endophytic actinomycetes (I) <i>Streptomyces<\/i> sp. isolated from rhododendron and its antimicrobial activity. J Gen Plant Pathol. 66:360-366."},{"key":"56","doi-asserted-by":"crossref","unstructured":"56. Shirling, EB, and D Gottlieb. 1966. Methods for characterization of <i>Streptomyces<\/i> species. Int J Sys Bacteriol. 16:313-340.","DOI":"10.1099\/00207713-16-3-313"},{"key":"57","doi-asserted-by":"publisher","unstructured":"57. Sierra, G. 1957. A simple method for the detection of lipolytic activity of microorganisms and some observations on the influence of the contact between cells and fatty substances. Antonie van Leeuwenhoek. 23:15-22.","DOI":"10.1007\/BF02545855"},{"key":"58","doi-asserted-by":"crossref","unstructured":"58. Sun, X, and L-D Guo. 2012. Endophytic fungal diversity: review of traditional and molecular techniques. Mycology. 3:65-76.","DOI":"10.1080\/21501203.2012.656724"},{"key":"59","doi-asserted-by":"crossref","unstructured":"59. Tagawa, M, H Tamaki, A Manome, O Koyama, and Y Kamagata. 2010. Isolation and characterization of antagonistic fungi against potato scab pathogens from potato field soils. FEMS Microbiol Lett. 305:136-142.","DOI":"10.1111\/j.1574-6968.2010.01928.x"},{"key":"60","doi-asserted-by":"crossref","unstructured":"60. Tchameni, SN, D Nwaga, LN Wakam, ELM Ngonkeu, R Fokom, J Kuate, and FX Etoa. 2012. Growth enhancement, amino acid synthesis and reduction in susceptibility towards <i>Phytophthora megakarya<\/i> by arbuscular mycorrhizal fungi inoculation in cocoa plants. J Phytopathol. 160:220-228.","DOI":"10.1111\/j.1439-0434.2012.01888.x"},{"key":"61","doi-asserted-by":"crossref","unstructured":"61. Teather, RM, and PJ Wood. 1982. Use of Congo red-polysaccharide interactions in enumeration and characterization of cellulolytic bacteria from the bovine rumen. Appl Environ Microbiol. 43:777-780.","DOI":"10.1128\/AEM.43.4.777-780.1982"},{"key":"62","doi-asserted-by":"crossref","unstructured":"62. Tian, X, L Cao, H Tan, W Han, M Chen, Y Liu, and S Zhou. 2007. Diversity of cultivated and uncultivated actinobacterial endophytes in the stems and roots of rice. Microb Ecol. 53:700-707.","DOI":"10.1007\/s00248-006-9163-4"},{"key":"63","doi-asserted-by":"crossref","first-page":"43","DOI":"10.7202\/706118ar","volume":"78","author":"V Toussaint","year":"1997","unstructured":"63. Toussaint, V, D Valois, M Dodier, E Faucher, C D\u00e9ry, R Brzezinski, L Ruest, and C Beaulieu. 1997. Characterization of actinomycetes antagonistic to <i>Phytophthora fragariae<\/i> var. <i>rubi<\/i>, the causal agent of raspberry root rot. Phytoprotection. 78:43-51.","journal-title":"Phytoprotection","ISSN":"https:\/\/id.crossref.org\/issn\/0031-9511","issn-type":"print"},{"key":"64","doi-asserted-by":"crossref","unstructured":"64. West, ER, EJ Cother, CC Steel, and GJ Ash. 2010. The characterization and diversity of the bacterial endophytes of grapevine. Can J Microbiol. 56:209-216.","DOI":"10.1139\/W10-004"},{"key":"65","doi-asserted-by":"crossref","unstructured":"65. Williams, ST, M Goodfellow, G Alderson, EMH Wellington, PHA Sneath, and MJ Sackin. 1983. Numerical classification of <i>Streptomyces<\/i> and related genera. J Gen Microbiol. 129:1743-1813.","DOI":"10.1099\/00221287-129-6-1743"},{"key":"66","doi-asserted-by":"crossref","unstructured":"66. Williams, ST, M Goodfellow, EMH Wellington, JC Vickers, G Alderson, and PHA Sneath. 1983. A probability matrix for identification of some streptomycetes. J Gen Microbiol. 129:1815-1830.","DOI":"10.1099\/00221287-129-6-1815"},{"key":"67","doi-asserted-by":"crossref","unstructured":"67. Zilberg-Rosenberg, I, and E Rosenberg. 2008. Role of the microorganism in the evolution of animals and plants: the hologenome theory of evolution. 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