{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,4,13]],"date-time":"2024-04-13T21:31:34Z","timestamp":1713043894041},"reference-count":23,"publisher":"Public Library of Science (PLoS)","issue":"3","license":[{"start":{"date-parts":[[2009,3,13]],"date-time":"2009-03-13T00:00:00Z","timestamp":1236902400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["www.ploscompbiol.org"],"crossmark-restriction":false},"short-container-title":["PLoS Comput Biol"],"DOI":"10.1371\/journal.pcbi.1000317","type":"journal-article","created":{"date-parts":[[2009,3,12]],"date-time":"2009-03-12T21:30:16Z","timestamp":1236893416000},"page":"e1000317","update-policy":"http:\/\/dx.doi.org\/10.1371\/journal.pcbi.corrections_policy","source":"Crossref","is-referenced-by-count":11,"title":["Robust Detection and Genotyping of Single Feature Polymorphisms from Gene Expression Data"],"prefix":"10.1371","volume":"5","author":[{"given":"Minghui","family":"Wang","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiaohua","family":"Hu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gang","family":"Li","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Lindsey J.","family":"Leach","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Elena","family":"Potokina","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Arnis","family":"Druka","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Robbie","family":"Waugh","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michael J.","family":"Kearsey","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zewei","family":"Luo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"340","published-online":{"date-parts":[[2009,3,13]]},"reference":[{"key":"ref1","doi-asserted-by":"crossref","first-page":"1194","DOI":"10.1126\/science.281.5380.1194","article-title":"Direct allelic variation scanning of the yeast genome.","volume":"281","author":"EA Winzeler","year":"1998","journal-title":"Science"},{"key":"ref2","doi-asserted-by":"crossref","first-page":"413","DOI":"10.1016\/S1360-1385(03)00186-9","article-title":"Gene arrays are not just for measuring gene expression.","volume":"8","author":"SP Hazen","year":"2003","journal-title":"Trends Plant Sci"},{"key":"ref3","doi-asserted-by":"crossref","first-page":"513","DOI":"10.1101\/gr.541303","article-title":"Large-scale identification of single-feature polymorphisms in complex genomes.","volume":"13","author":"JO Borevitz","year":"2003","journal-title":"Genome Res"},{"key":"ref4","doi-asserted-by":"crossref","first-page":"284","DOI":"10.1101\/gr.2850605","article-title":"Simultaneous genotyping, gene-expression measurement, and detection of allele-specific expression with oligonucleotide arrays.","volume":"15","author":"J Ronald","year":"2005","journal-title":"Genome Res"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"818","DOI":"10.1038\/nbt836","article-title":"A model of molecular interactions on short oligonucleotide microarrays.","volume":"21","author":"L Zhang","year":"2003","journal-title":"Nat Biotechnol"},{"key":"ref6","doi-asserted-by":"crossref","first-page":"787","DOI":"10.1101\/gr.5011206","article-title":"High-density haplotyping with microarray-based expression and single feature polymorphism markers in Arabidopsis.","volume":"16","author":"MAL West","year":"2006","journal-title":"Genome Res"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"3852","DOI":"10.1093\/bioinformatics\/bti640","article-title":"Detecting single-feature polymorphisms using oligonucleotide arrays and robustified projection pursuit.","volume":"21","author":"XP Cui","year":"2005","journal-title":"Bioinformatics"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"R54","DOI":"10.1186\/gb-2005-6-6-r54","article-title":"Single-feature polymorphism discovery in the barley transcriptome.","volume":"6","author":"N Rostoks","year":"2005","journal-title":"Genome Biol"},{"key":"ref9","doi-asserted-by":"crossref","first-page":"789","DOI":"10.1534\/genetics.106.067843","article-title":"SFP genotyping from Affymetrix arrays is robust but largely detects cis-acting expression regulators.","volume":"176","author":"ZW Luo","year":"2007","journal-title":"Genetics"},{"key":"ref10","doi-asserted-by":"crossref","first-page":"185","DOI":"10.1093\/genetics\/121.1.185","article-title":"Mapping mendelian factors underlying quantitative traits using RFLP linkage maps.","volume":"121","author":"ES Lander","year":"1989","journal-title":"Genetics"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"388","DOI":"10.1016\/S0168-9525(01)02310-1","article-title":"Genetical genomics: the added value from segregation.","volume":"17","author":"RC Jansen","year":"2001","journal-title":"Trends Genet"},{"key":"ref12","doi-asserted-by":"crossref","first-page":"297","DOI":"10.1038\/nature01434","article-title":"Genetics of gene expression surveyed in maize, mouse and man.","volume":"422","author":"EE Schadt","year":"2003","journal-title":"Nature"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"31","DOI":"10.1073\/pnas.98.1.31","article-title":"Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection.","volume":"98","author":"C Li","year":"2001","journal-title":"Proc Natl Acad of Sci U S A"},{"key":"ref14","doi-asserted-by":"crossref","first-page":"752","DOI":"10.1126\/science.1069516","article-title":"Genetic dissection of transcriptional regulation in budding yeast.","volume":"296","author":"RB Brem","year":"2002","journal-title":"Science"},{"key":"ref15","doi-asserted-by":"crossref","first-page":"743","DOI":"10.1038\/nature02797","article-title":"Genetic analysis of genome-wide variation in human gene expression.","volume":"430","author":"M Morley","year":"2004","journal-title":"Nature"},{"key":"ref16","doi-asserted-by":"crossref","first-page":"1224","DOI":"10.1038\/ng1619","article-title":"Integrating genotypic and expression data in a segregating mouse population to identify 5-lipoxygenase as a susceptibility gene for obesity and bone traits.","volume":"37","author":"M Mehrabian","year":"2005","journal-title":"Nat Genet"},{"key":"ref17","doi-asserted-by":"crossref","first-page":"5116","DOI":"10.1073\/pnas.091062498","article-title":"Significance analysis of microarrays applied to the ionizing radiation response.","volume":"98","author":"VG Tusher","year":"2001","journal-title":"Proc Natl Acad of Sci U S A"},{"key":"ref18","doi-asserted-by":"crossref","first-page":"739","DOI":"10.1111\/j.1365-313X.1993.00739.x","article-title":"Construction of integrated genetic linkage maps by means of a new computer package: JoinMap.","volume":"3","author":"P Stam","year":"1993","journal-title":"Plant Journal"},{"key":"ref19","article-title":"JoinMap\u00ae 3.0, Software for the calculation of genetic linkage maps","author":"JW Van Ooijen","year":"2001"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"1479","DOI":"10.1534\/genetics.106.065292","article-title":"Genetic Dissection of Ethanol Tolerance in the Budding Yeast Saccharomyces cerevisiae.","volume":"175","author":"XH Hu","year":"2007","journal-title":"Genetics"},{"key":"ref21","doi-asserted-by":"crossref","first-page":"202","DOI":"10.1007\/s10142-006-0025-4","article-title":"An atlas of gene expression from seed to seed through barley development.","volume":"6","author":"A Druka","year":"2006","journal-title":"Funct Integr Genomics"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"249","DOI":"10.1093\/biostatistics\/4.2.249","article-title":"Exploration, normalization, and summaries of high density oligonucleotide array probe level data.","volume":"4","author":"RA Irizarry","year":"2003","journal-title":"Biostatistics"},{"key":"ref23","doi-asserted-by":"crossref","first-page":"909","DOI":"10.1198\/016214504000000683","article-title":"A model-based background adjustment for oligonucleotide expression arrays.","volume":"99","author":"ZJ Wu","year":"2004","journal-title":"J Amer Statistical Assoc"}],"container-title":["PLoS Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pcbi.1000317","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,10,3]],"date-time":"2021-10-03T05:02:47Z","timestamp":1633237367000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1000317"}},"subtitle":[],"editor":[{"given":"Gary D.","family":"Stormo","sequence":"first","affiliation":[],"role":[{"role":"editor","vocabulary":"crossref"}]}],"short-title":[],"issued":{"date-parts":[[2009,3,13]]},"references-count":23,"journal-issue":{"issue":"3","published-online":{"date-parts":[[2009,3,13]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pcbi.1000317","relation":{},"ISSN":["1553-7358"],"issn-type":[{"value":"1553-7358","type":"electronic"}],"subject":[],"published":{"date-parts":[[2009,3,13]]}}}