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Milano: Ledizioni."},{"key":"ref54","unstructured":"Kohn D, Wickson S, White W, Benson G J (1997) Anesthesia and Analgesia in Laboratory Animals. London: Academic Press."},{"key":"ref55","unstructured":"Paxinos G, Watson C (2006) The Rat Brain in Stereotaxic Coordinates, London: Academic Press."},{"key":"ref56","doi-asserted-by":"crossref","first-page":"e35850","DOI":"10.1371\/journal.pone.0035850","article-title":"Predicting Spike Occurrence and Neuronal Responsiveness from LFPs in Primary Somatosensory Cortex","volume":"7","author":"R Storchi","year":"2012","journal-title":"PLoS ONE"},{"key":"ref57","doi-asserted-by":"crossref","first-page":"474","DOI":"10.1152\/jn.00642.2010","article-title":"Removal of spurious correlations between spikes and local field potentials","volume":"105","author":"TP Zanos","year":"2011","journal-title":"J Neurophysiol"},{"key":"ref58","doi-asserted-by":"crossref","first-page":"1661","DOI":"10.1162\/089976604774201631","article-title":"Unsupervised spike sorting with wavelets and superparamagnetic clustering","volume":"16","author":"RQ Quiroga","year":"2004","journal-title":"Neural Computation"},{"key":"ref59","doi-asserted-by":"crossref","first-page":"769","DOI":"10.1016\/S0896-6273(01)00251-3","article-title":"The Role of Spiking Timing in the Coding of Stimulus Location in Rat Somatosensory Cortex","volume":"29","author":"S Panzeri","year":"2001","journal-title":"Neuron"},{"key":"ref60","doi-asserted-by":"crossref","first-page":"349","DOI":"10.1016\/j.cub.2008.02.062","article-title":"Phase Coding: Spikes Get a Boost from Local Fields","volume":"18","author":"PE Latham","year":"2008","journal-title":"Current Biology"},{"key":"ref61","doi-asserted-by":"crossref","first-page":"378","DOI":"10.1111\/j.1460-9568.2008.06025.x","article-title":"Tactile responses of hindpaw, forepaw and whisker neurons in the thalamic ventrobasal complex of anaesthetized rats","volume":"27","author":"J Aguilar","year":"2008","journal-title":"Eur J Neurosci"},{"key":"ref62","first-page":"Article 5","article-title":"VOGUE: A Variable Order Hidden Markov Model with Duration Based on Frequent Sequence Mining","volume":"4","author":"MJ Zaki","year":"2010","journal-title":"ACM Transactions on Knowledge Discovery in Data"},{"key":"ref63","doi-asserted-by":"crossref","first-page":"480","DOI":"10.1214\/aos\/1018031204","article-title":"Variable Length Markov Chains","volume":"27","author":"P B\u00fchlmann","year":"1999","journal-title":"The Annals of Statistics"},{"key":"ref64","doi-asserted-by":"crossref","first-page":"385","DOI":"10.1613\/jair.1491","article-title":"On Prediction Using Variable Order Markov Models","volume":"22","author":"R Begleiter","year":"2004","journal-title":"Journal of Artificial Intelligence Research"},{"key":"ref65","doi-asserted-by":"crossref","first-page":"396","DOI":"10.1109\/TCOM.1984.1096090","article-title":"Data Compression Using Adaptive Coding and Partial String Matching","volume":"32","author":"J Cleary","year":"1984","journal-title":"IEEE Transactions on Communications"},{"key":"ref66","unstructured":"Teahan W (1995) Probability estimation for PPM. 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