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Open LabBook. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/www.neural-circuits.org\/open-labbook\" xlink:type=\"simple\">http:\/\/www.neural-circuits.org\/open-labbook<\/ext-link>"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"2640","DOI":"10.1016\/j.apsusc.2005.03.235","article-title":"Blog-based research notebook: personal informatics workbench for high-throughput experimentation","volume":"252","author":"S Todoroki","year":"2006","journal-title":"Appl Surf Sci"},{"key":"ref6","unstructured":"Ruggiero P, Heckathorn MA (2012). Data backup options. 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