{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,24]],"date-time":"2026-01-24T15:14:24Z","timestamp":1769267664582,"version":"3.49.0"},"reference-count":18,"publisher":"Public Library of Science (PLoS)","issue":"6","license":[{"start":{"date-parts":[[2016,6,16]],"date-time":"2016-06-16T00:00:00Z","timestamp":1466035200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["www.ploscompbiol.org"],"crossmark-restriction":false},"short-container-title":["PLoS Comput Biol"],"DOI":"10.1371\/journal.pcbi.1004937","type":"journal-article","created":{"date-parts":[[2016,6,16]],"date-time":"2016-06-16T14:48:54Z","timestamp":1466088534000},"page":"e1004937","update-policy":"https:\/\/doi.org\/10.1371\/journal.pcbi.corrections_policy","source":"Crossref","is-referenced-by-count":6,"title":["Training in High-Throughput Sequencing: Common Guidelines to Enable Material Sharing, Dissemination, and Reusability"],"prefix":"10.1371","volume":"12","author":[{"given":"Bastian","family":"Schiffthaler","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1818-4050","authenticated-orcid":false,"given":"Myrto","family":"Kostadima","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"name":"NGS Trainer Consortium","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3053-0796","authenticated-orcid":true,"given":"Nicolas","family":"Delhomme","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3085-1271","authenticated-orcid":true,"given":"Gabriella","family":"Rustici","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"340","published-online":{"date-parts":[[2016,6,16]]},"reference":[{"issue":"4","key":"ref1","doi-asserted-by":"crossref","first-page":"586","DOI":"10.1016\/j.molcel.2015.05.004","article-title":"High-Throughput Sequencing Technologies","volume":"58","author":"JA Reuter","year":"2015","journal-title":"Molecular Cell"},{"issue":"5","key":"ref2","doi-asserted-by":"crossref","first-page":"563","DOI":"10.1093\/bib\/bbt022","article-title":"Next-generation sequencing: a challenge to meet the increasing demand for training workshops in Australia","volume":"14","author":"NS Watson-Haigh","year":"2013","journal-title":"Brief Bioinform"},{"issue":"5","key":"ref3","doi-asserted-by":"crossref","first-page":"538","DOI":"10.1093\/bib\/bbt018","article-title":"The challenges of delivering bioinformatics training in the analysis of high-throughput data","volume":"14","author":"BS Carvalho","year":"2013","journal-title":"Brief Bioinform"},{"key":"ref4","unstructured":"Elixir: A distributed infrastructure for life-sciences. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"https:\/\/www.elixir-europe.org\/elixir-training\/\" xlink:type=\"simple\">https:\/\/www.elixir-europe.org\/elixir-training\/<\/ext-link>"},{"key":"ref5","unstructured":"GOBLET: Global Organisation for Bioinformatics Learning, Education &amp; Training. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/mygoblet.org\/\" xlink:type=\"simple\">http:\/\/mygoblet.org\/<\/ext-link>"},{"issue":"4","key":"ref6","doi-asserted-by":"crossref","first-page":"e1004143","DOI":"10.1371\/journal.pcbi.1004143","article-title":"GOBLET: the Global Organisation for Bioinformatics Learning, Education and Training","volume":"11","author":"TK Attwood","year":"2015","journal-title":"PLoS Comput Biol"},{"key":"ref7","unstructured":"TeSS: ELIXIR&apos;s Training Portal. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"https:\/\/tess.oerc.ox.ac.uk\/\" xlink:type=\"simple\">https:\/\/tess.oerc.ox.ac.uk\/<\/ext-link>"},{"key":"ref8","unstructured":"GOBLET Training Portal. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/mygoblet.org\/training-portal\" xlink:type=\"simple\">http:\/\/mygoblet.org\/training-portal<\/ext-link>"},{"issue":"1","key":"ref9","doi-asserted-by":"crossref","first-page":"140","DOI":"10.1093\/bioinformatics\/btu601","article-title":"The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers","volume":"31","author":"M Corpas","year":"2015","journal-title":"Bioinformatics"},{"key":"ref10","unstructured":"Git: Local branching on the cheap. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"https:\/\/git-scm.com\/\" xlink:type=\"simple\">https:\/\/git-scm.com\/<\/ext-link>"},{"issue":"6","key":"ref11","doi-asserted-by":"crossref","first-page":"838","DOI":"10.1016\/j.stem.2014.04.003","article-title":"Reorganization of Enhancer Patterns in Transition from Naive to Primed Pluripotency","volume":"14","author":"C Buecker","year":"2014","journal-title":"Cell Stem Cell"},{"key":"ref12","unstructured":"Software carpentry. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"https:\/\/software-carpentry.org\/\" xlink:type=\"simple\">https:\/\/software-carpentry.org\/<\/ext-link>"},{"issue":"1","key":"ref13","doi-asserted-by":"crossref","first-page":"e1001745","DOI":"10.1371\/journal.pbio.1001745","article-title":"Best practices for scientific computing","volume":"12","author":"G Wilson","year":"2014","journal-title":"PLoS Biol"},{"issue":"10","key":"ref14","doi-asserted-by":"crossref","first-page":"1325","DOI":"10.1093\/bioinformatics\/btt113","article-title":"EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats","volume":"29","author":"J Ison","year":"2013","journal-title":"Bioinformatics"},{"key":"ref15","unstructured":"HTS training material repository. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/bioinformatics.upsc.se\/htmr\" xlink:type=\"simple\">http:\/\/bioinformatics.upsc.se\/htmr<\/ext-link>"},{"key":"ref16","unstructured":"GitLab. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"https:\/\/about.gitlab.com\/\" xlink:type=\"simple\">https:\/\/about.gitlab.com\/<\/ext-link>"},{"key":"ref17","unstructured":"Elixir Tools and Data Services Registry. <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"https:\/\/elixir-registry.cbs.dtu.dk\" xlink:type=\"simple\">https:\/\/elixir-registry.cbs.dtu.dk<\/ext-link>"},{"key":"ref18","article-title":"Tools and data services registry: a community effort to document bioinformatics resources","author":"J Ison","year":"2015","journal-title":"Nucleic Acids Res"}],"container-title":["PLOS Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pcbi.1004937","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2018,10,22]],"date-time":"2018-10-22T15:03:40Z","timestamp":1540220620000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1004937"}},"subtitle":[],"editor":[{"given":"Francis","family":"Ouellette","sequence":"first","affiliation":[],"role":[{"role":"editor","vocabulary":"crossref"}]}],"short-title":[],"issued":{"date-parts":[[2016,6,16]]},"references-count":18,"journal-issue":{"issue":"6","published-online":{"date-parts":[[2016,6,16]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pcbi.1004937","relation":{},"ISSN":["1553-7358"],"issn-type":[{"value":"1553-7358","type":"electronic"}],"subject":[],"published":{"date-parts":[[2016,6,16]]}}}