{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,8]],"date-time":"2026-04-08T23:36:58Z","timestamp":1775691418333,"version":"3.50.1"},"update-to":[{"DOI":"10.1371\/journal.pcbi.1006085","type":"new_version","label":"New version","source":"publisher","updated":{"date-parts":[[2018,5,10]],"date-time":"2018-05-10T00:00:00Z","timestamp":1525910400000}}],"reference-count":59,"publisher":"Public Library of Science (PLoS)","issue":"4","license":[{"start":{"date-parts":[[2018,4,30]],"date-time":"2018-04-30T00:00:00Z","timestamp":1525046400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100011259","name":"FP7 International Cooperation","doi-asserted-by":"publisher","award":["FP7 204429"],"award-info":[{"award-number":["FP7 204429"]}],"id":[{"id":"10.13039\/100011259","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100006488","name":"INRA","doi-asserted-by":"crossref","id":[{"id":"10.13039\/501100006488","id-type":"DOI","asserted-by":"crossref"}]},{"name":"D\u00e9partement Sant\u00e9 des Plantes et Environnement"},{"DOI":"10.13039\/501100003199","name":"FranceAgriMer","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100003199","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["www.ploscompbiol.org"],"crossmark-restriction":false},"short-container-title":["PLoS Comput Biol"],"DOI":"10.1371\/journal.pcbi.1006085","type":"journal-article","created":{"date-parts":[[2018,4,30]],"date-time":"2018-04-30T13:34:43Z","timestamp":1525095283000},"page":"e1006085","update-policy":"https:\/\/doi.org\/10.1371\/journal.pcbi.corrections_policy","source":"Crossref","is-referenced-by-count":37,"title":["Estimation of the dispersal distances of an aphid-borne virus in a patchy landscape"],"prefix":"10.1371","volume":"14","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-6450-1475","authenticated-orcid":true,"given":"David R. J.","family":"Pleydell","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Samuel","family":"Soubeyrand","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sylvie","family":"Dallot","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"G\u00e9rard","family":"Labonne","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jo\u00ebl","family":"Chad\u0153uf","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Emmanuel","family":"Jacquot","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2987-4997","authenticated-orcid":true,"given":"Ga\u00ebl","family":"Th\u00e9baud","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"340","published-online":{"date-parts":[[2018,4,30]]},"reference":[{"key":"ref1","article-title":"Infectious Diseases of Humans Dynamics and Control","author":"RM Anderson","year":"1992"},{"key":"ref2","article-title":"Modeling Infectious Diseases in Humans and Animals","author":"MJ Keeling","year":"2007"},{"key":"ref3","first-page":"125","article-title":"Encyclopedia of Infectious Diseases","author":"S Savary","year":"2007"},{"issue":"7","key":"ref4","doi-asserted-by":"crossref","first-page":"638","DOI":"10.1094\/PHYTO-100-7-0638","article-title":"The effect of landscape pattern on the optimal eradication zone of an invading epidemic","volume":"100","author":"S Parnell","year":"2010","journal-title":"Phytopathology"},{"issue":"24","key":"ref5","doi-asserted-by":"crossref","first-page":"9155","DOI":"10.1073\/pnas.0400335101","article-title":"Using conservation of pattern to estimate spatial parameters from a single snapshot","volume":"101","author":"MJ Keeling","year":"2004","journal-title":"Proc Natl Acad Sci USA"},{"issue":"1","key":"ref6","doi-asserted-by":"crossref","first-page":"46","DOI":"10.1016\/j.tpb.2010.04.003","article-title":"Estimating the kernel parameters of premises-based stochastic models of farmed animal infectious disease epidemics using limited, incomplete, or ongoing data","volume":"78","author":"C Rorres","year":"2010","journal-title":"Theor Popul Biol"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"6","DOI":"10.1016\/j.epidem.2014.06.002","article-title":"Thirteen challenges in modelling plant diseases","volume":"10","author":"NJ Cunniffe","year":"2015","journal-title":"Epidemics"},{"issue":"1","key":"ref8","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1016\/S0167-5877(02)00122-8","article-title":"A point pattern model of the spread of foot-and-mouth disease","volume":"56","author":"G Gerbier","year":"2002","journal-title":"Prev Vet Med"},{"issue":"33","key":"ref9","doi-asserted-by":"crossref","first-page":"12120","DOI":"10.1073\/pnas.0400829101","article-title":"Bayesian analysis of botanical epidemics using stochastic compartmental models","volume":"101","author":"GJ Gibson","year":"2004","journal-title":"Proc Natl Acad Sci USA"},{"issue":"51","key":"ref10","doi-asserted-by":"crossref","first-page":"20392","DOI":"10.1073\/pnas.0706461104","article-title":"Estimation of multiple transmission rates for epidemics in heterogeneous populations","volume":"104","author":"AR Cook","year":"2007","journal-title":"Proc Natl Acad Sci USA"},{"issue":"9","key":"ref11","doi-asserted-by":"crossref","first-page":"e1002174","DOI":"10.1371\/journal.pcbi.1002174","article-title":"The effect of heterogeneity on invasion in spatial epidemics: From theory to experimental evidence in a model system","volume":"7","author":"FM Neri","year":"2011","journal-title":"PLoS Comput Biol"},{"issue":"70","key":"ref12","doi-asserted-by":"crossref","first-page":"949","DOI":"10.1098\/rsif.2011.0506","article-title":"Applications of percolation theory to fungal spread with synergy","volume":"9","author":"JJ Ludlam","year":"2012","journal-title":"J R Soc Interface"},{"issue":"8","key":"ref13","doi-asserted-by":"crossref","first-page":"e1003753","DOI":"10.1371\/journal.pcbi.1003753","article-title":"Cost-effective control of plant disease when epidemiological knowledge is incomplete: modelling Bahia bark scaling of citrus","volume":"10","author":"NJ Cunniffe","year":"2014","journal-title":"PLoS Comput Biol"},{"issue":"1","key":"ref14","doi-asserted-by":"crossref","first-page":"21","DOI":"10.1016\/j.epidem.2008.09.001","article-title":"Epidemiological inference for partially observed epidemics: the example of the 2001 foot and mouth epidemic in Great Britain","volume":"1","author":"I Chis Ster","year":"2009","journal-title":"Epidemics"},{"issue":"3","key":"ref15","doi-asserted-by":"crossref","first-page":"308","DOI":"10.1086\/603624","article-title":"Spatiotemporal structure of host-pathogen interactions in a metapopulation","volume":"174","author":"S Soubeyrand","year":"2009","journal-title":"Am Nat"},{"issue":"2","key":"ref16","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1890\/ES10-00192.1","article-title":"Epidemiological modeling of invasion in heterogeneous landscapes: spread of sudden oak death in California (1990\u20132030)","volume":"2","author":"RK Meentemeyer","year":"2011","journal-title":"Ecosphere"},{"issue":"4","key":"ref17","doi-asserted-by":"crossref","first-page":"e1003587","DOI":"10.1371\/journal.pcbi.1003587","article-title":"Bayesian analysis for inference of an emerging epidemic: citrus canker in urban landscapes","volume":"10","author":"FM Neri","year":"2014","journal-title":"PLoS Comput Biol"},{"issue":"17","key":"ref18","doi-asserted-by":"crossref","first-page":"6258","DOI":"10.1073\/pnas.1310997111","article-title":"Bayesian inference for an emerging arboreal epidemic in the presence of control","volume":"111","author":"M Parry","year":"2014","journal-title":"Proc Natl Acad Sci USA"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"13420","DOI":"10.1073\/pnas.1611391113","article-title":"How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study","author":"H Salje","year":"2016","journal-title":"Proc Natl Acad Sci USA"},{"issue":"16","key":"ref20","doi-asserted-by":"crossref","first-page":"985","DOI":"10.1098\/rsif.2007.1154","article-title":"Accounting for biological variability and sampling scale: a multi-scale approach to building epidemic models","volume":"4","author":"S Soubeyrand","year":"2007","journal-title":"J Roy Soc Interface"},{"issue":"7206","key":"ref21","doi-asserted-by":"crossref","first-page":"877","DOI":"10.1038\/nature07084","article-title":"Inapparent infections and cholera dynamics","volume":"454","author":"AA King","year":"2008","journal-title":"Nature"},{"issue":"45","key":"ref22","doi-asserted-by":"crossref","first-page":"18238","DOI":"10.1073\/pnas.1103002108","article-title":"Bayesian modeling to unmask and predict influenza A\/H1N1pdm dynamics in London","volume":"108","author":"PJ Birrell","year":"2011","journal-title":"Proc Natl Acad Sci USA"},{"issue":"4","key":"ref23","doi-asserted-by":"crossref","first-page":"343","DOI":"10.1023\/A:1024971521887","article-title":"The correction for bias in prevalence estimation with screening tests","volume":"13","author":"B Gambino","year":"1997","journal-title":"J Gambl Stud"},{"key":"ref24","doi-asserted-by":"crossref","first-page":"28","DOI":"10.1016\/j.ecolmodel.2015.12.014","article-title":"Management of invading pathogens should be informed by epidemiology rather than administrative boundaries","volume":"324","author":"RN Thompson","year":"2016","journal-title":"Ecol Model"},{"key":"ref25","doi-asserted-by":"crossref","DOI":"10.1017\/CBO9780511790874","article-title":"Event History Modeling: A Guide for Social Scientists","author":"JM Box-Steffensmeier","year":"2004"},{"issue":"4","key":"ref26","doi-asserted-by":"crossref","first-page":"435","DOI":"10.1046\/j.1365-3059.2000.00469.x","article-title":"A general model of plant-virus disease infection incorporating vector aggregation","volume":"49","author":"XS Zhang","year":"2000","journal-title":"Plant Pathol"},{"issue":"4","key":"ref27","doi-asserted-by":"crossref","first-page":"937","DOI":"10.1111\/j.1365-294X.2004.02100.x","article-title":"Using genetic markers to estimate the pollen dispersal curve","volume":"13","author":"F Austerlitz","year":"2004","journal-title":"Mol Ecol"},{"key":"ref28","first-page":"187","article-title":"Dispersal Ecology and Evolution","author":"R Nathan","year":"2012"},{"issue":"8","key":"ref29","doi-asserted-by":"crossref","first-page":"e103225","DOI":"10.1371\/journal.pone.0103225","article-title":"Long-distance wind-dispersal of spores in a fungal plant pathogen: estimation of anisotropic dispersal kernels from an extensive field experiment","volume":"9","author":"A Rieux","year":"2014","journal-title":"PLoS ONE"},{"issue":"3","key":"ref30","doi-asserted-by":"crossref","first-page":"530","DOI":"10.1111\/aab.12205","article-title":"Transmission of <italic>Leptosphaeria maculans<\/italic> from a cropping season to the following one","volume":"166","author":"L Bousset","year":"2015","journal-title":"Ann Appl Biol"},{"issue":"5","key":"ref31","doi-asserted-by":"crossref","first-page":"521","DOI":"10.1093\/aesa\/90.5.521","article-title":"Arthropod transmission of plant viruses: a new synthesis","volume":"90","author":"L Nault","year":"1997","journal-title":"Ann Entomol Soc America"},{"issue":"2","key":"ref32","doi-asserted-by":"crossref","first-page":"291","DOI":"10.1111\/j.1469-185X.1993.tb00998.x","article-title":"The relative importance of short- and long-range movement of flying aphids","volume":"68","author":"HD Loxdale","year":"1993","journal-title":"Biol Rev"},{"key":"ref33","doi-asserted-by":"crossref","first-page":"357","DOI":"10.1146\/annurev-phyto-080614-120140","article-title":"Sharka epidemiology and worldwide management strategies: Learning lessons to optimize disease control in perennial plants","volume":"53","author":"L Rimbaud","year":"2015","journal-title":"Annu Rev Phytopathol"},{"issue":"9","key":"ref34","doi-asserted-by":"crossref","first-page":"938","DOI":"10.1111\/j.1364-3703.2011.00752.x","article-title":"Top 10 plant viruses in molecular plant pathology","volume":"12","author":"KBG Scholthof","year":"2011","journal-title":"Molec Plant Pathol"},{"issue":"2","key":"ref35","doi-asserted-by":"crossref","first-page":"202","DOI":"10.1111\/j.1365-2338.2006.01027.x","article-title":"<italic>Plum pox virus<\/italic> and the estimated costs associated with sharka disease","volume":"36","author":"M Cambra","year":"2006","journal-title":"EPPO Bull"},{"key":"ref36","doi-asserted-by":"crossref","first-page":"207","DOI":"10.17660\/ActaHortic.1995.386.27","article-title":"Aphids as potential vectors of plum pox virus: comparison of methods of testing and epidemiological consequences","volume":"386","author":"G Labonne","year":"1995","journal-title":"Acta Hortic"},{"issue":"1","key":"ref37","doi-asserted-by":"crossref","first-page":"457","DOI":"10.1146\/annurev.ento.44.1.457","article-title":"Management of plant viral diseases through chemical control of insect vectors","volume":"44","author":"TM Perring","year":"1999","journal-title":"Annu Rev Entomol"},{"issue":"4","key":"ref38","doi-asserted-by":"crossref","first-page":"442","DOI":"10.1080\/07060661.2013.844733","article-title":"Epidemiology of Plum pox \u2018D\u2019 strain in Canada and the USA","volume":"35","author":"TR Gottwald","year":"2013","journal-title":"Canad J Plant Pathol"},{"key":"ref39","doi-asserted-by":"crossref","first-page":"290","DOI":"10.17660\/ActaHortic.1995.386.39","article-title":"Behaviour of two isolates of plum pox virus inoculated on peach and apricot trees: first results","volume":"386","author":"JB Quiot","year":"1995","journal-title":"Acta Hortic"},{"issue":"7","key":"ref40","doi-asserted-by":"crossref","first-page":"843","DOI":"10.1016\/j.envsoft.2008.11.006","article-title":"Computation of the integrated flow of particles between polygons","volume":"24","author":"A Bouvier","year":"2009","journal-title":"Environ Model Softw"},{"key":"ref41","article-title":"Analysis of survival data","author":"DR Cox","year":"1984"},{"issue":"398","key":"ref42","doi-asserted-by":"crossref","first-page":"528","DOI":"10.1080\/01621459.1987.10478458","article-title":"The calculation of posterior distributions by data augmentation","volume":"82","author":"MA Tanner","year":"1987","journal-title":"JASA"},{"issue":"1","key":"ref43","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1198\/10618600152418584","article-title":"The art of data augmentation","volume":"10","author":"DA van Dyk","year":"2001","journal-title":"J Comput Graph Stat"},{"key":"ref44","doi-asserted-by":"crossref","first-page":"434","DOI":"10.1016\/j.csda.2012.12.012","article-title":"Simulation-based Bayesian inference for epidemic models","volume":"71","author":"TJ McKinley","year":"2014","journal-title":"Comput Stat Data Anal"},{"issue":"1","key":"ref45","doi-asserted-by":"crossref","first-page":"79","DOI":"10.1214\/aoms\/1177729694","article-title":"On Information and Sufficiency","volume":"22","author":"S Kullback","year":"1951","journal-title":"Ann Math Statist"},{"key":"ref46","article-title":"Theory of point estimation","author":"EL Lehmann","year":"2006"},{"issue":"11","key":"ref47","doi-asserted-by":"crossref","first-page":"e1002768","DOI":"10.1371\/journal.pcbi.1002768","article-title":"A bayesian inference framework to reconstruct transmission trees using epidemiological and genetic data","volume":"8","author":"MJ Morelli","year":"2012","journal-title":"PLoS Comput Biol"},{"issue":"11","key":"ref48","doi-asserted-by":"crossref","first-page":"e1004633","DOI":"10.1371\/journal.pcbi.1004633","article-title":"A systematic Bayesian integration of epidemiological and genetic data","volume":"11","author":"MS Lau","year":"2015","journal-title":"PLoS Comput Biol"},{"issue":"4","key":"ref49","doi-asserted-by":"crossref","first-page":"1238","DOI":"10.1890\/15-0807","article-title":"Invasiveness of plant pathogens depends on the spatial scale of host distribution","volume":"26","author":"A Mikaberidze","year":"2016","journal-title":"Ecol Appl"},{"issue":"8","key":"ref50","doi-asserted-by":"crossref","first-page":"2313","DOI":"10.1890\/08-1461.1","article-title":"Likelihood ridges and multimodality in population growth rate models","volume":"90","author":"L Polansky","year":"2009","journal-title":"Ecology"},{"issue":"21","key":"ref51","doi-asserted-by":"crossref","first-page":"2607","DOI":"10.1103\/PhysRevLett.57.2607","article-title":"Replica Monte Carlo simulation of spin-glasses","volume":"57","author":"RH Swendsen","year":"1986","journal-title":"Phys Rev Lett"},{"issue":"4","key":"ref52","doi-asserted-by":"crossref","first-page":"1581","DOI":"10.1214\/009053606000000515","article-title":"Equi-energy sampler with applications in statistical inference and statistical mechanics","volume":"34","author":"S Kou","year":"2006","journal-title":"Ann Stat"},{"issue":"4","key":"ref53","doi-asserted-by":"crossref","first-page":"711","DOI":"10.1093\/biomet\/82.4.711","article-title":"Reversible jump Markov chain Monte Carlo computation and Bayesian model determination","volume":"82","author":"PJ Green","year":"1995","journal-title":"Biometrika"},{"issue":"8","key":"ref54","doi-asserted-by":"crossref","first-page":"2611","DOI":"10.1111\/j.1365-294X.2005.02553.x","article-title":"Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study","volume":"14","author":"G Evanno","year":"2005","journal-title":"Mol Ecol"},{"key":"ref55","doi-asserted-by":"crossref","first-page":"14","DOI":"10.1186\/2051-3933-1-14","article-title":"Cereal aphid movement: general principles and simulation modelling","volume":"1","author":"HR Parry","year":"2013","journal-title":"Mov Ecol"},{"issue":"4","key":"ref56","doi-asserted-by":"crossref","first-page":"451","DOI":"10.1016\/j.ecolmodel.2006.01.006","article-title":"Aphid population response to agricultural landscape change: a spatially explicit, individual-based model","volume":"199","author":"HR Parry","year":"2006","journal-title":"Ecol Model"},{"key":"ref57","doi-asserted-by":"crossref","first-page":"1543","DOI":"10.1094\/PHYTO.2003.93.12.1543","article-title":"Spatial pattern analysis of sharka disease (<italic>Plum pox virus<\/italic> strain M) in peach orchards of southern France","volume":"93","author":"S Dallot","year":"2003","journal-title":"Phytopathology"},{"key":"ref58","doi-asserted-by":"crossref","first-page":"1390","DOI":"10.1094\/PHYTO.2004.94.12.1390","article-title":"Factors affecting the spread of <italic>Plum pox virus<\/italic> strain M in peach orchards subjected to roguing in France","volume":"94","author":"S Dallot","year":"2004","journal-title":"Phytopathology"},{"issue":"3","key":"ref59","doi-asserted-by":"crossref","first-page":"266","DOI":"10.1094\/PD-79-0266","article-title":"Analysis of the spatial spread of sharka (plum pox virus) in apricot and peach orchards in eastern Spain","volume":"79","author":"T Gottwald","year":"1995","journal-title":"Plant Dis"}],"updated-by":[{"DOI":"10.1371\/journal.pcbi.1009315","type":"correction","label":"Correction","source":"publisher","updated":{"date-parts":[[2021,8,10]],"date-time":"2021-08-10T00:00:00Z","timestamp":1628553600000}},{"DOI":"10.1371\/journal.pcbi.1006085","type":"new_version","label":"New version","source":"publisher","updated":{"date-parts":[[2018,5,10]],"date-time":"2018-05-10T00:00:00Z","timestamp":1525910400000}}],"container-title":["PLOS Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pcbi.1006085","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,10,17]],"date-time":"2019-10-17T03:37:31Z","timestamp":1571283451000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1006085"}},"subtitle":[],"editor":[{"given":"Samuel","family":"Alizon","sequence":"first","affiliation":[],"role":[{"role":"editor","vocabulary":"crossref"}]}],"short-title":[],"issued":{"date-parts":[[2018,4,30]]},"references-count":59,"journal-issue":{"issue":"4","published-online":{"date-parts":[[2018,4,30]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pcbi.1006085","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/109561","asserted-by":"object"}]},"ISSN":["1553-7358"],"issn-type":[{"value":"1553-7358","type":"electronic"}],"subject":[],"published":{"date-parts":[[2018,4,30]]}}}