{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,16]],"date-time":"2026-02-16T09:02:52Z","timestamp":1771232572800,"version":"3.50.1"},"update-to":[{"DOI":"10.1371\/journal.pcbi.1007111","type":"new_version","label":"New version","source":"publisher","updated":{"date-parts":[[2019,9,26]],"date-time":"2019-09-26T00:00:00Z","timestamp":1569456000000}}],"reference-count":38,"publisher":"Public Library of Science (PLoS)","issue":"9","license":[{"start":{"date-parts":[[2019,9,16]],"date-time":"2019-09-16T00:00:00Z","timestamp":1568592000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100000774","name":"Defense Threat Reduction Agency","doi-asserted-by":"publisher","award":["HDTRA1-11-D-0016-000"],"award-info":[{"award-number":["HDTRA1-11-D-0016-000"]}],"id":[{"id":"10.13039\/100000774","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["5U01GM070694"],"award-info":[{"award-number":["5U01GM070694"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["1R01GM109718"],"award-info":[{"award-number":["1R01GM109718"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["www.ploscompbiol.org"],"crossmark-restriction":false},"short-container-title":["PLoS Comput Biol"],"DOI":"10.1371\/journal.pcbi.1007111","type":"journal-article","created":{"date-parts":[[2019,9,16]],"date-time":"2019-09-16T17:31:45Z","timestamp":1568655105000},"page":"e1007111","update-policy":"https:\/\/doi.org\/10.1371\/journal.pcbi.corrections_policy","source":"Crossref","is-referenced-by-count":53,"title":["Optimizing spatial allocation of seasonal influenza vaccine under temporal constraints"],"prefix":"10.1371","volume":"15","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-0874-8692","authenticated-orcid":true,"given":"Srinivasan","family":"Venkatramanan","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jiangzhuo","family":"Chen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7396-0350","authenticated-orcid":true,"given":"Arindam","family":"Fadikar","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sandeep","family":"Gupta","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dave","family":"Higdon","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0793-6082","authenticated-orcid":true,"given":"Bryan","family":"Lewis","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Madhav","family":"Marathe","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3363-2947","authenticated-orcid":true,"given":"Henning","family":"Mortveit","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Anil","family":"Vullikanti","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"340","published-online":{"date-parts":[[2019,9,16]]},"reference":[{"issue":"1645","key":"pcbi.1007111.ref001","doi-asserted-by":"crossref","first-page":"20130426","DOI":"10.1098\/rstb.2013.0426","article-title":"After 2015: Infectious diseases in a new era of health and development","volume":"369","author":"Dye Christopher","year":"2014","journal-title":"Philosophical Transactions of the Royal Society B: Biological Sciences"},{"issue":"5948","key":"pcbi.1007111.ref002","doi-asserted-by":"crossref","first-page":"1705","DOI":"10.1126\/science.1175570","article-title":"Optimizing influenza vaccine distribution","volume":"325","author":"J Medlock","year":"2009","journal-title":"Science"},{"key":"pcbi.1007111.ref003","unstructured":"Estimated Influenza Illnesses, Medical visits, and Hospitalizations Averted by Vaccination https:\/\/www.cdc.gov\/flu\/about\/burden-averted\/index.htm (accessed 2019-03-06)."},{"issue":"6988","key":"pcbi.1007111.ref004","doi-asserted-by":"crossref","first-page":"180","DOI":"10.1038\/nature02541","article-title":"Modeling disease outbreaks in realistic urban social networks","volume":"429","author":"S Eubank","year":"2004","journal-title":"Nature"},{"key":"pcbi.1007111.ref005","unstructured":"U.S. Department of Health and Human Services, Guidance on allocating and targeting pandemic influenza vaccine https:\/\/www.cdc.gov\/flu\/pandemic-resources\/pdf\/2018-Influenza-Guidance.pdf (accessed: 2019-03-06)."},{"key":"pcbi.1007111.ref006","article-title":"Optimizing the impact of low-efficacy influenza vaccines","author":"P Sah","year":"2018","journal-title":"Proceedings of the National Academy of Sciences"},{"issue":"5772","key":"pcbi.1007111.ref007","doi-asserted-by":"crossref","first-page":"447","DOI":"10.1126\/science.1125237","article-title":"Synchrony, waves, and spatial hierarchies in the spread of influenza","volume":"312","author":"C Viboud","year":"2006","journal-title":"Science"},{"key":"pcbi.1007111.ref008","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1007\/978-1-4614-5278-2_2","volume-title":"Handbook of Operations Research for Homeland Security","author":"RC Larson","year":"2013"},{"issue":"7","key":"pcbi.1007111.ref009","doi-asserted-by":"crossref","first-page":"2015","DOI":"10.1073\/pnas.0510525103","article-title":"The role of the airline transportation network in the prediction and predictability of global epidemics","volume":"103","author":"V Colizza","year":"2006","journal-title":"Proceedings of the National Academy of Sciences of the United States of America"},{"key":"pcbi.1007111.ref010","doi-asserted-by":"crossref","first-page":"5347","DOI":"10.1038\/ncomms6347","article-title":"Predicting commuter flows in spatial networks using a radiation model based on temporal ranges","volume":"5","author":"Yihui Ren","year":"2014","journal-title":"Nature communications"},{"issue":"7","key":"pcbi.1007111.ref011","doi-asserted-by":"crossref","first-page":"88","DOI":"10.1145\/2483852.2483871","article-title":"Computational epidemiology","volume":"56","author":"M Marathe","year":"2013","journal-title":"Communications of the ACM"},{"key":"pcbi.1007111.ref012","first-page":"1","article-title":"Mathematical approaches to infectious disease prediction and control","volume":"7","author":"NB Dimitrov","year":"2010","journal-title":"INFORMS tutorials in operations research"},{"issue":"5737","key":"pcbi.1007111.ref013","doi-asserted-by":"crossref","first-page":"1083","DOI":"10.1126\/science.1115717","article-title":"Containing pandemic influenza at the source","volume":"309","author":"IM Longini","year":"2005","journal-title":"Science"},{"issue":"no. 3","key":"pcbi.1007111.ref014","doi-asserted-by":"crossref","first-page":"132","DOI":"10.1016\/j.epidem.2012.06.001","article-title":"Estimating influenza latency and infectious period durations using viral excretion data","volume":"4","author":"A. Cori","year":"2012","journal-title":"Epidemics"},{"issue":"7056","key":"pcbi.1007111.ref015","doi-asserted-by":"crossref","first-page":"209","DOI":"10.1038\/nature04017","article-title":"Strategies for containing an emerging influenza pandemic in Southeast Asia","volume":"437","author":"NM Ferguson","year":"2005","journal-title":"Nature"},{"issue":"5","key":"pcbi.1007111.ref016","doi-asserted-by":"crossref","first-page":"e10520","DOI":"10.1371\/journal.pone.0010520","article-title":"Optimal pandemic influenza vaccine allocation strategies for the Canadian population","volume":"5","author":"AR Tuite","year":"2010","journal-title":"PloS one"},{"issue":"3","key":"pcbi.1007111.ref017","doi-asserted-by":"crossref","first-page":"132","DOI":"10.1016\/j.jocs.2010.07.002","article-title":"Modeling the spatial spread of infectious diseases: The GLobal Epidemic and Mobility computational model","volume":"1","author":"D Balcan","year":"2010","journal-title":"Journal of computational science"},{"key":"pcbi.1007111.ref018","doi-asserted-by":"crossref","unstructured":"Venkatramanan S, Chen J, Gupta S, Lewis B, Marathe M, Mortveit H, et al. Spatio-temporal optimization of seasonal vaccination using a metapopulation model of influenza. In: Healthcare Informatics (ICHI), 2017 IEEE International Conference on. IEEE; 2017. p. 134\u2013143.","DOI":"10.1109\/ICHI.2017.83"},{"key":"pcbi.1007111.ref019","unstructured":"American Community Survey, US Census Bureau. https:\/\/www.census.gov\/programs-surveys\/acs\/ (accessed: 2019-03-06)."},{"key":"pcbi.1007111.ref020","unstructured":"Airline Information for Download, Bureau of Transportation Statistics. https:\/\/www.bts.gov\/topics\/airlines-and-airports\/airline-information-download (accessed: 2019-03-06)."},{"issue":"11","key":"pcbi.1007111.ref021","doi-asserted-by":"crossref","first-page":"2004","DOI":"10.1007\/s11538-015-0113-5","article-title":"SIS and SIR epidemic models under virtual dispersal","volume":"77","author":"D Bichara","year":"2015","journal-title":"Bulletin of mathematical biology"},{"key":"pcbi.1007111.ref022","doi-asserted-by":"crossref","unstructured":"Zhang Y, Adiga A, Vullikanti A, Prakash BA. Controlling propagation at group scale on networks. In: Data Mining (ICDM), 2015 IEEE International Conference on. IEEE; 2015. p. 619\u2013628.","DOI":"10.1109\/ICDM.2015.59"},{"key":"pcbi.1007111.ref023","doi-asserted-by":"crossref","unstructured":"Saha S, Adiga A, Prakash BA, Vullikanti AKS. Approximation algorithms for reducing the spectral radius to control epidemic spread. In: Proceedings of the 2015 SIAM International Conference on Data Mining. SIAM; 2015. p. 568\u2013576.","DOI":"10.1137\/1.9781611974010.64"},{"issue":"2","key":"pcbi.1007111.ref024","doi-asserted-by":"crossref","first-page":"e1005382","DOI":"10.1371\/journal.pcbi.1005382","article-title":"Human mobility and the spatial transmission of influenza in the United States","volume":"13","author":"V Charu","year":"2017","journal-title":"PLoS computational biology"},{"issue":"5\/6","key":"pcbi.1007111.ref025","doi-asserted-by":"crossref","first-page":"1615","DOI":"10.3934\/mbe.2013.10.1615","article-title":"Optimal strategies of social distancing and vaccination against seasonal influenza","volume":"10","author":"E Shim","year":"2013","journal-title":"Mathematical Biosciences & Engineering"},{"key":"pcbi.1007111.ref026","doi-asserted-by":"crossref","unstructured":"Prakash BA, Adamic L, Iwashyna T, Tong H, Faloutsos C. Fractional immunization in networks. In: Proceedings of the 2013 SIAM International Conference on Data Mining. SIAM; 2013. p. 659\u2013667.","DOI":"10.1137\/1.9781611972832.73"},{"issue":"6","key":"pcbi.1007111.ref027","doi-asserted-by":"crossref","first-page":"634","DOI":"10.1017\/dmp.2015.105","article-title":"Assessing the capacity of the US health care system to use additional mechanical ventilators during a large-scale public health emergency","volume":"9","author":"A Ajao","year":"2015","journal-title":"Disaster medicine and public health preparedness"},{"issue":"6","key":"pcbi.1007111.ref028","doi-asserted-by":"crossref","first-page":"914","DOI":"10.3201\/eid2306.161417","article-title":"Stockpiling ventilators for influenza pandemics","volume":"23","author":"HC Huang","year":"2017","journal-title":"Emerging infectious diseases"},{"key":"pcbi.1007111.ref029","unstructured":"PatchSim code and data for sample US simulation. https:\/\/github.com\/srinivvenkat\/PatchSim."},{"issue":"4","key":"pcbi.1007111.ref030","doi-asserted-by":"crossref","first-page":"1685","DOI":"10.1137\/17M1161233","article-title":"Calibrating a Stochastic, Agent-Based Model Using Quantile-Based Emulation","volume":"6","author":"A Fadikar","year":"2018","journal-title":"SIAM\/ASA Journal on Uncertainty Quantification"},{"issue":"4","key":"pcbi.1007111.ref031","doi-asserted-by":"crossref","first-page":"488","DOI":"10.1080\/00401706.2013.842936","article-title":"Computer model calibration using the ensemble kalman filter","volume":"55","author":"D Higdon","year":"2013","journal-title":"Technometrics"},{"issue":"3","key":"pcbi.1007111.ref032","doi-asserted-by":"crossref","first-page":"197","DOI":"10.1023\/A:1008935410038","article-title":"On sequential Monte Carlo sampling methods for Bayesian filtering","volume":"10","author":"A. Doucet","journal-title":"Statistics and computing"},{"key":"pcbi.1007111.ref033","unstructured":"Disease Burden of Influenza https:\/\/www.cdc.gov\/flu\/about\/burden\/index.html (accessed: 2019-03-06)."},{"key":"pcbi.1007111.ref034","unstructured":"National, Regional, and State Level Outpatient Illness and Viral Surveillance, CDC. https:\/\/gis.cdc.gov\/grasp\/fluview\/fluportaldashboard.html (accessed: 2019-03-06)."},{"key":"pcbi.1007111.ref035","unstructured":"Weekly Influenza Surveillance Report Prepared by the Influenza Division, CDC. https:\/\/gis.cdc.gov\/grasp\/fluview\/main.html (accessed: 2019-03-06)."},{"key":"pcbi.1007111.ref036","unstructured":"FluVaxView: Influenza Vaccination Coverage, CDC. https:\/\/www.cdc.gov\/flu\/fluvaxview\/ (accessed: 2019-03-06)."},{"key":"pcbi.1007111.ref037","unstructured":"Seasonal Influenza Vaccine Supply & Distribution, CDC. https:\/\/www.cdc.gov\/flu\/about\/qa\/index.htm (accessed: 2019-03-06)."},{"key":"pcbi.1007111.ref038","unstructured":"Strategic National Stockpile, ASPR. https:\/\/www.phe.gov\/about\/sns\/Pages\/default.aspx (accessed: 2019-03-06)."}],"updated-by":[{"DOI":"10.1371\/journal.pcbi.1007111","type":"new_version","label":"New version","source":"publisher","updated":{"date-parts":[[2019,9,26]],"date-time":"2019-09-26T00:00:00Z","timestamp":1569456000000}}],"container-title":["PLOS Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pcbi.1007111","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,5,9]],"date-time":"2020-05-09T01:58:36Z","timestamp":1588989516000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1007111"}},"subtitle":[],"editor":[{"given":"Cecile","family":"Viboud","sequence":"first","affiliation":[],"role":[{"role":"editor","vocabulary":"crossref"}]}],"short-title":[],"issued":{"date-parts":[[2019,9,16]]},"references-count":38,"journal-issue":{"issue":"9","published-online":{"date-parts":[[2019,9,16]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pcbi.1007111","relation":{"new_version":[{"id-type":"doi","id":"10.1371\/journal.pcbi.1007111","asserted-by":"object"}]},"ISSN":["1553-7358"],"issn-type":[{"value":"1553-7358","type":"electronic"}],"subject":[],"published":{"date-parts":[[2019,9,16]]}}}