{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,21]],"date-time":"2026-04-21T10:32:35Z","timestamp":1776767555181,"version":"3.51.2"},"reference-count":34,"publisher":"Public Library of Science (PLoS)","issue":"7","license":[{"start":{"date-parts":[[2020,7,2]],"date-time":"2020-07-02T00:00:00Z","timestamp":1593648000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100000865","name":"Bill and Melinda Gates Foundation","doi-asserted-by":"publisher","award":["RG67082"],"award-info":[{"award-number":["RG67082"]}],"id":[{"id":"10.13039\/100000865","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["www.ploscompbiol.org"],"crossmark-restriction":false},"short-container-title":["PLoS Comput Biol"],"DOI":"10.1371\/journal.pcbi.1007823","type":"journal-article","created":{"date-parts":[[2020,7,2]],"date-time":"2020-07-02T17:26:34Z","timestamp":1593710794000},"page":"e1007823","update-policy":"https:\/\/doi.org\/10.1371\/journal.pcbi.corrections_policy","source":"Crossref","is-referenced-by-count":20,"title":["Computational models to improve surveillance for cassava brown streak disease and minimize yield loss"],"prefix":"10.1371","volume":"16","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-7024-0443","authenticated-orcid":true,"given":"Alex C.","family":"Ferris","sequence":"first","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1765-2633","authenticated-orcid":true,"given":"Richard O. J. H.","family":"Stutt","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5224-2234","authenticated-orcid":true,"given":"David","family":"Godding","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6845-0003","authenticated-orcid":true,"given":"Christopher A.","family":"Gilligan","sequence":"additional","affiliation":[]}],"member":"340","published-online":{"date-parts":[[2020,7,2]]},"reference":[{"key":"pcbi.1007823.ref001","volume-title":"A review of cassava in Africa with country case studies on Nigeria, Ghana, the United Republic of Tanzania, Uganda and Benin","author":"FAO, IFAD","year":"2005"},{"key":"pcbi.1007823.ref002","doi-asserted-by":"crossref","first-page":"389","DOI":"10.1046\/j.1439-0434.2001.00641.x","article-title":"Effects of brown streak virus disease on yield and quality of cassava in Tanzania","volume":"149","author":"RJ Hillocks","year":"2001","journal-title":"J Phytopathol"},{"key":"pcbi.1007823.ref003","doi-asserted-by":"crossref","first-page":"1365","DOI":"10.1099\/vir.0.014688-0","article-title":"Analysis of cassava brown streak viruses reveals the presence of distinct virus species causing cassava brown streak disease in East Africa","volume":"91","author":"S Winter","year":"2010","journal-title":"J Gen Virol"},{"key":"pcbi.1007823.ref004","first-page":"154","article-title":"The brown streak disease of cassava","volume":"15","author":"RFW Nichols","year":"1950","journal-title":"East Afr Agric J"},{"key":"pcbi.1007823.ref005","doi-asserted-by":"crossref","first-page":"24","DOI":"10.1094\/PD-91-0024","article-title":"Re-emergence of cassava brown streak disease in Uganda","volume":"91","author":"T Alicai","year":"2007","journal-title":"Plant Dis"},{"key":"pcbi.1007823.ref006","doi-asserted-by":"crossref","first-page":"299","DOI":"10.1111\/ppa.12453","article-title":"Cassava brown streak disease and the sustainability of a clean seed system","volume":"65","author":"CF McQuaid","year":"2016","journal-title":"Plant Pathol"},{"key":"pcbi.1007823.ref007","article-title":"Community phytosanitation to manage cassava brown streak disease","author":"J Legg","year":"2017","journal-title":"Virus Res"},{"key":"pcbi.1007823.ref008","first-page":"1","article-title":"Farmers\u2019 knowledge of cassava brown streak disease and its management in Malawi","volume":"0","author":"MM Chipeta","year":"2016","journal-title":"Int J Pest Manag"},{"key":"pcbi.1007823.ref009","doi-asserted-by":"crossref","first-page":"129","DOI":"10.1016\/j.virusres.2003.12.021","article-title":"Methods of surveying the incidence and severity of cassava mosaic disease and whitefly vector populations on cassava in Africa: a review","volume":"100","author":"P Sseruwagi","year":"2004","journal-title":"Virus Res"},{"key":"pcbi.1007823.ref010","first-page":"86","article-title":"Disparity between leaf and root symptoms and crop losses associated with cassava brown streak disease in four countries in Eastern Africa","volume":"2004","author":"R Hillocks","year":"2015","journal-title":"J Phytopathol"},{"key":"pcbi.1007823.ref011","first-page":"284","article-title":"Influence of host plant resistance and disease pressure on spread of cassava brown streak disease in Uganda","volume":"7","author":"K Katono","year":"2015","journal-title":"Am J Exp Agric"},{"key":"pcbi.1007823.ref012","doi-asserted-by":"crossref","first-page":"379","DOI":"10.1146\/annurev-ecolsys-102209-144621","article-title":"Approximate Bayesian computation in evolution and ecology","volume":"41","author":"MA Beaumont","year":"2010","journal-title":"Annu Rev Ecol Evol Syst"},{"key":"pcbi.1007823.ref013","unstructured":"Jeremiah SC. The role of the whitefly (Bemisia tabaci Gennadius) in the transmission and spread of cassava brown streak and cassava mosaic viruses in the field and semi field conditions. PhD Thesis, PhD Thesis, University of Dar es salaam. 2014."},{"key":"pcbi.1007823.ref014","doi-asserted-by":"crossref","first-page":"707","DOI":"10.1111\/jph.12609","article-title":"The role of the whitefly, Bemisia tabaci (Gennadius), and farmer practices in the spread of cassava brown streak Ipomoviruses","author":"MN Maruthi","year":"2017","journal-title":"J Phytopathol"},{"key":"pcbi.1007823.ref015","first-page":"40","article-title":"Efficiency of cassava brown streak virus transmission by two whitefly species in coastal Kenya","volume":"1","author":"B Mware","year":"2009","journal-title":"J Gen Mol Virol"},{"key":"pcbi.1007823.ref016","doi-asserted-by":"crossref","first-page":"307","DOI":"10.1111\/j.1439-0434.2005.00974.x","article-title":"Transmission of cassava brown streak virus by Bemisia Tabaci (Gennadius)","volume":"312","author":"M Maruthi","year":"2005","journal-title":"J Phytopathol"},{"key":"pcbi.1007823.ref017","doi-asserted-by":"crossref","first-page":"e96642","DOI":"10.1371\/journal.pone.0096642","article-title":"Transcriptional response of virus-infected cassava and identification of putative sources of resistance for cassava brown streak disease","volume":"9","author":"MN Maruthi","year":"2014","journal-title":"PLOS ONE"},{"key":"pcbi.1007823.ref018","volume-title":"Sweet Potato Seed Systems Community of Practice","author":"P Pacific","year":"2016"},{"key":"pcbi.1007823.ref019","doi-asserted-by":"crossref","first-page":"370","DOI":"10.1016\/j.dib.2018.05.016","article-title":"Incidence of cassava mosaic disease and associated whitefly vectors in South West and North Central Nigeria: Data exploration","volume":"19","author":"AO Eni","year":"2018","journal-title":"Data Brief"},{"key":"pcbi.1007823.ref020","volume-title":"The Cassava Diagnostics Project (CDP): A review of 10 years of research 2008\u20132018","author":"P Sseruwagi","year":"2018"},{"key":"pcbi.1007823.ref021","article-title":"New spread of cassava brown streak virus disease and its implications for the movement of cassava germplasm in the East and Central African region","author":"P Ntawuruhunga","year":"2007","journal-title":"USAID Crop Crisis Control Proj C3P"},{"key":"pcbi.1007823.ref022","doi-asserted-by":"crossref","first-page":"353","DOI":"10.1007\/s00705-008-0301-9","article-title":"Genetically distinct strains of cassava brown streak virus in the Lake Victoria basin and the Indian Ocean Coastal Area of East Africa","volume":"154","author":"DR Mbanzibwa","year":"2009","journal-title":"Arch Virol"},{"key":"pcbi.1007823.ref023","article-title":"CassavaMap, a fine-resolution representation of cassava production and harvested area in Africa in 2014","author":"AM Szyniszewska","year":"2019","journal-title":"figshare"},{"key":"pcbi.1007823.ref024","doi-asserted-by":"crossref","first-page":"2044","DOI":"10.5197\/j.2044-0588.2011.024.026","article-title":"First report of cassava brown streak disease and associated Ugandan cassava brown streak virus in Burundi","volume":"24","author":"S Bigirimana","year":"2011","journal-title":"New Dis Rep"},{"key":"pcbi.1007823.ref025","article-title":"First report of Ugandan cassava brown streak virus on cassava in Democratic Republic of Congo","volume":"5197","author":"W Mulimbi","year":"2012","journal-title":"New Dis Rep"},{"key":"pcbi.1007823.ref026","doi-asserted-by":"crossref","first-page":"377","DOI":"10.1111\/ppa.12789","article-title":"Cassava brown streak disease in Rwanda, the associated viruses and disease phenotypes","volume":"67","author":"E Munganyinka","year":"2018","journal-title":"Plant Pathol"},{"key":"pcbi.1007823.ref027","doi-asserted-by":"crossref","first-page":"1410","DOI":"10.1094\/PDIS-11-17-1707-RE","article-title":"Cassava brown streak disease and Ugandan cassava brown streak virus reported for the first time in Zambia","volume":"102","author":"RM Mulenga","year":"2018","journal-title":"Plant Dis"},{"key":"pcbi.1007823.ref028","article-title":"Cassava disease surveillance surveys 2009 mapping report Great Lakes Cassava Initiative text and mapping","author":"J Legg","year":"2010","journal-title":"Surv Team Leadersh Simon Bigirimana Burundi Hannington Obiero Kenya Gervais Gashaka Rwanda"},{"key":"pcbi.1007823.ref029","doi-asserted-by":"crossref","first-page":"597","DOI":"10.5897\/AJPS2013.1098","article-title":"Knowledge on cassava disease management: The case of cassava brown streak disease awareness in Northern Uganda","volume":"7","author":"A Kumakech","year":"2013","journal-title":"Afr J Plant Sci"},{"key":"pcbi.1007823.ref030","volume-title":"Regeneration guidelines: Cassava","author":"MA Jorge","year":"2008"},{"key":"pcbi.1007823.ref031","volume-title":"Growing cassava: Training manual for extension and farmers in Zambia","author":"M Chiona","year":"2016"},{"key":"pcbi.1007823.ref032","first-page":"237","article-title":"Response of selected cassava varieties to the incidence and severity of cassava brown streak disease in Tanzania","volume":"4","author":"GM Rwegasira","year":"2012","journal-title":"J Agric Sci"},{"key":"pcbi.1007823.ref033","doi-asserted-by":"crossref","first-page":"956","DOI":"10.1099\/jgv.0.000014","article-title":"Cassava brown streak disease: A threat to food security in Africa","volume":"96","author":"BL Patil","year":"2014","journal-title":"J Gen Virol"},{"key":"pcbi.1007823.ref034","doi-asserted-by":"crossref","first-page":"560","DOI":"10.1270\/jsbbs.16005","article-title":"Eleven years of breeding efforts to combat cassava brown streak disease","volume":"66","author":"RS Kawuki","year":"2016","journal-title":"Breed Sci"}],"container-title":["PLOS Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1007823","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,7,2]],"date-time":"2020-07-02T17:26:51Z","timestamp":1593710811000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1007823"}},"subtitle":[],"editor":[{"given":"Konstantin B.","family":"Blyuss","sequence":"first","affiliation":[]}],"short-title":[],"issued":{"date-parts":[[2020,7,2]]},"references-count":34,"journal-issue":{"issue":"7","published-online":{"date-parts":[[2020,7,2]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pcbi.1007823","relation":{},"ISSN":["1553-7358"],"issn-type":[{"value":"1553-7358","type":"electronic"}],"subject":[],"published":{"date-parts":[[2020,7,2]]}}}