{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,25]],"date-time":"2025-10-25T21:55:48Z","timestamp":1761429348951,"version":"3.37.3"},"reference-count":60,"publisher":"Public Library of Science (PLoS)","issue":"5","license":[{"start":{"date-parts":[[2020,5,14]],"date-time":"2020-05-14T00:00:00Z","timestamp":1589414400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["www.ploscompbiol.org"],"crossmark-restriction":false},"short-container-title":["PLoS Comput Biol"],"DOI":"10.1371\/journal.pcbi.1007868","type":"journal-article","created":{"date-parts":[[2020,5,14]],"date-time":"2020-05-14T17:41:13Z","timestamp":1589478073000},"page":"e1007868","update-policy":"https:\/\/doi.org\/10.1371\/journal.pcbi.corrections_policy","source":"Crossref","is-referenced-by-count":7,"title":["Ten simple rules for designing learning experiences that involve enhancing computational biology Wikipedia articles"],"prefix":"10.1371","volume":"16","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-4795-8799","authenticated-orcid":true,"given":"Alastair M.","family":"Kilpatrick","sequence":"first","affiliation":[]},{"given":"Audra","family":"Anjum","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6419-9416","authenticated-orcid":true,"given":"Lonnie","family":"Welch","sequence":"additional","affiliation":[]}],"member":"340","published-online":{"date-parts":[[2020,5,14]]},"reference":[{"key":"pcbi.1007868.ref001","unstructured":"Wikipedia: List of most popular websites. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=List_of_most_popular_websites&oldid=944679471"},{"key":"pcbi.1007868.ref002","unstructured":"Pageviews Analysis [cited 2020 Mar 29]. Available from: https:\/\/tools.wmflabs.org\/pageviews\/?project=en.wikipedia.org&platform=all-access&agent=user&redirects=0&range=last-year&pages=Bioinformatics|CRISPR"},{"issue":"7","key":"pcbi.1007868.ref003","doi-asserted-by":"crossref","first-page":"1523","DOI":"10.1002\/asi.23616","article-title":"Teaching with Wikipedia in a 21st-Century Classroom: Perceptions of Wikipedia and Its Educational Benefits","volume":"67","author":"P Konieczny","year":"2016","journal-title":"J Assoc Inf Sci Technol"},{"issue":"9","key":"pcbi.1007868.ref004","doi-asserted-by":"crossref","first-page":"e1003242","DOI":"10.1371\/journal.pcbi.1003242","article-title":"ISCB Computational Biology Wikipedia Competition","volume":"9","author":"A Bateman","year":"2013","journal-title":"PLoS Comput Biol"},{"issue":"12","key":"pcbi.1007868.ref005","doi-asserted-by":"crossref","first-page":"e1005235","DOI":"10.1371\/journal.pcbi.1005235","article-title":"The 5th ISCB Wikipedia Competition: coming to a classroom near you?","volume":"12","author":"AM Kilpatrick","year":"2016","journal-title":"PLoS Comput Biol"},{"volume-title":"Russ College graduate students take top prizes in international Wikipedia competition","year":"2018","author":"A Hartenbach","key":"pcbi.1007868.ref006"},{"key":"pcbi.1007868.ref007","unstructured":"Chromosome conformation capture. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Chromosome_conformation_capture&oldid=945981410"},{"key":"pcbi.1007868.ref008","unstructured":"Molecular phylogenetics. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Molecular_phylogenetics&oldid=945076943"},{"key":"pcbi.1007868.ref009","unstructured":"Ruzzo-Tompa algorithm. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Ruzzo%E2%80%93Tompa_algorithm&oldid=926969040"},{"key":"pcbi.1007868.ref010","unstructured":"Wikipedia:Education program. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Wikipedia:Education_program&oldid=942391593"},{"issue":"3","key":"pcbi.1007868.ref011","doi-asserted-by":"crossref","first-page":"273","DOI":"10.2304\/elea.2012.9.3.273","article-title":"Assigning Students to Edit Wikipedia: four case studies","volume":"9","author":"BW Carver","year":"2012","journal-title":"E-Learning and Digital Media"},{"issue":"3","key":"pcbi.1007868.ref012","doi-asserted-by":"crossref","first-page":"268","DOI":"10.1177\/1475725716653081","article-title":"Giving Psychology Away: Implementation of Wikipedia Editing in an Introductory Human Development Course","volume":"15","author":"C Shane-Simpson","year":"2016","journal-title":"Psychology Learning & Teaching"},{"issue":"1","key":"pcbi.1007868.ref013","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1187\/cbe.11-08-0064","article-title":"Writing-to-learn in Undergraduate Science Education: A Community-Based, Conceptually Driven Approach","volume":"11","author":"JA Reynolds","year":"2012","journal-title":"CBE Life Sci Educ"},{"volume-title":"Reference Guide to Writing Across the Curriculum","year":"2005","author":"C Bazerman","key":"pcbi.1007868.ref014"},{"issue":"1","key":"pcbi.1007868.ref015","doi-asserted-by":"crossref","first-page":"46","DOI":"10.1080\/00986280903425813","article-title":"Enhanced Learning and Retention through \u201cWriting to Learn\u201d in the Psychology Classroom","volume":"37","author":"TL Stewart","year":"2010","journal-title":"Teach Psychol"},{"key":"pcbi.1007868.ref016","doi-asserted-by":"crossref","unstructured":"Hartman JD. Writing to learn and communicate in a data structures course. SIGCSE '89 Proceedings of the Twentieth SIGCSE Technical Symposium on Computer Science Education; 1989. doi: 10.1145\/65293.71191","DOI":"10.1145\/65293.71191"},{"key":"pcbi.1007868.ref017","unstructured":"TEAL Center Staff. Student-centered Learning. Teaching Excellence in Adult Literacy (TEAL) Center. 2010 [cited 2019 Oct 16]. Available from: https:\/\/lincs.ed.gov\/sites\/default\/files\/6%20_TEAL_Student-Centered.pdf"},{"issue":"3","key":"pcbi.1007868.ref018","doi-asserted-by":"crossref","first-page":"107","DOI":"10.1080\/00219266.2006.9656026","article-title":"Learning Genetics through an Authentic Research Simulation in Bioinformatics","volume":"40","author":"H Gelbart","year":"2010","journal-title":"J Biol Educ"},{"key":"pcbi.1007868.ref019","doi-asserted-by":"crossref","first-page":"98","DOI":"10.1187\/cbe.03-02-0007","article-title":"Public Access for Teaching Genomics, Proteomics, and Bioinformatics","volume":"2","author":"AM Campbell","year":"2003","journal-title":"Cell Biol Educ"},{"issue":"1","key":"pcbi.1007868.ref020","first-page":"1","article-title":"Editorial: The Components of Authentic Learning","volume":"3","author":"AC Rule","year":"2006","journal-title":"Journal of Authentic Learning"},{"key":"pcbi.1007868.ref021","unstructured":"Forte A, Bruckman A. From Wikipedia to the classroom: exploring online publication and learning. Proceedings of the 7th International Conference of the Learning Sciences. Bloomington, IN; 2006. doi: 10.5555\/1150034.1150061"},{"journal-title":"ALT-C 2008 Research Proceedings","year":"2008","author":"P Thomas","key":"pcbi.1007868.ref022"},{"issue":"5","key":"pcbi.1007868.ref023","doi-asserted-by":"crossref","first-page":"e1004943","DOI":"10.1371\/journal.pcbi.1004943","article-title":"Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB\u2019s Education Committee)","volume":"12","author":"L Welch","year":"2016","journal-title":"PLoS Comput Biol"},{"issue":"2","key":"pcbi.1007868.ref024","doi-asserted-by":"crossref","first-page":"e1005772","DOI":"10.1371\/journal.pcbi.1005772","article-title":"The development and application of bioinformatics core competencies to improve bioinformatics training and education","volume":"14","author":"N Mulder","year":"2018","journal-title":"PLoS Comput Biol"},{"key":"pcbi.1007868.ref025","unstructured":"Authentic Learning (2014). In The Glossary of Education Reform [cited 2019 Apr 5]. Available from: https:\/\/www.edglossary.org\/authentic-learning\/"},{"issue":"9","key":"pcbi.1007868.ref026","doi-asserted-by":"crossref","first-page":"e1000941","DOI":"10.1371\/journal.pcbi.1000941","article-title":"Ten Simple Rules for Editing Wikipedia","volume":"6","author":"DW Logan","year":"2010","journal-title":"PLoS Comput Biol"},{"issue":"3","key":"pcbi.1007868.ref027","doi-asserted-by":"crossref","first-page":"e1003496","DOI":"10.1371\/journal.pcbi.1003496","article-title":"Bioinformatics Curriculum Guidelines: Towards a Definition of Core Competencies","volume":"10","author":"L Welch","year":"2014","journal-title":"PLoS Comput Biol"},{"issue":"4","key":"pcbi.1007868.ref028","doi-asserted-by":"crossref","first-page":"333","DOI":"10.1177\/0748730412449578","article-title":"Learning Chronobiology by Improving Wikipedia","volume":"27","author":"CD Chiang","year":"2012","journal-title":"J Biol Rhythms"},{"issue":"4","key":"pcbi.1007868.ref029","doi-asserted-by":"crossref","first-page":"177","DOI":"10.1016\/j.tree.2009.01.003","article-title":"Improving Wikipedia: educational opportunity and professional responsibility","volume":"24","author":"KL Callis","year":"2009","journal-title":"Trends Ecol Evol"},{"issue":"15","key":"pcbi.1007868.ref030","doi-asserted-by":"crossref","first-page":"2429","DOI":"10.1093\/bioinformatics\/btx388","article-title":"The International Society for Computational Biology and WikiProject Computational Biology: celebrating 10\u2009years of collaboration towards open access","volume":"33","author":"K O\u2019Neill","year":"2017","journal-title":"Bioinformatics"},{"key":"pcbi.1007868.ref031","unstructured":"Smith-Waterman algorithm: difference between revisions. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Feb 27]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Smith%E2%80%93Waterman_algorithm&type=revision&diff=757651058&oldid=749492818"},{"volume-title":"Creating Significant Learning Experiences: An Integrated Approach to Designing College Courses","year":"2003","author":"DL Fink","key":"pcbi.1007868.ref032"},{"key":"pcbi.1007868.ref033","unstructured":"Wikipedia Release Version Tools: Article lists (data for WikiProject Computational Biology). In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2019 Oct 16]. Available from: https:\/\/tools.wmflabs.org\/enwp10\/cgi-bin\/list2.fcgi?run=yes&projecta=Computational_Biology"},{"key":"pcbi.1007868.ref034","unstructured":"Wikipedia:Content assessment. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Wikipedia:Content_assessment&oldid=947821651"},{"key":"pcbi.1007868.ref035","unstructured":"Wikipedia:WikiProject Computational Biology\/Popular pages. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Wikipedia:WikiProject_Computational_Biology\/Popular_pages&oldid=944691181"},{"issue":"1","key":"pcbi.1007868.ref036","first-page":"73","article-title":"A time and a place for authentic learning","volume":"62","author":"JS Renzulli","year":"2004","journal-title":"Educational Leadership"},{"key":"pcbi.1007868.ref037","unstructured":"Margaret Oakley Dayhoff: Difference between revisions. In Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Margaret_Oakley_Dayhoff&type=revision&diff=752886109&oldid=742817941"},{"key":"pcbi.1007868.ref038","unstructured":"Education\/Case Studies\u2014Outreach Wiki. In: Wikimedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/outreach.wikimedia.org\/w\/index.php?title=Education\/Case_Studies&oldid=185813"},{"issue":"1","key":"pcbi.1007868.ref039","doi-asserted-by":"crossref","first-page":"121","DOI":"10.1007\/s13280-016-0820-7","article-title":"Publish (in English) or perish: The effect on citation rate of using languages other than English in scientific publications","volume":"46","author":"MS Di Bitetti","year":"2017","journal-title":"Ambio"},{"key":"pcbi.1007868.ref040","unstructured":"Blumenthal H. Tips for Grading a Wikipedia assignment. 2017 Nov 15. In: Recent News from Wiki Education [Internet]. San Francisco: Wikimedia [cited 2019 Oct 16]. Available from: https:\/\/wikiedu.org\/blog\/2017\/11\/15\/tips-for-grading-a-wikipedia-assignment\/"},{"key":"pcbi.1007868.ref041","unstructured":"Wikimedia Foundation. Wiki Education Classroom Program example grading rubric. Wikimedia. 2017 Nov 14 [cited 2019 Oct 16]. Available from: https:\/\/upload.wikimedia.org\/wikipedia\/commons\/d\/d2\/Wiki_Education_Classroom_Program_example_grading_rubric.pdf"},{"key":"pcbi.1007868.ref042","unstructured":"Wikimedia Foundation. Instructor Basics: How to use Wikipedia as a teaching tool. Wikimedia. 2012 Nov 1 [cited 2019 Oct 16]. Available from: https:\/\/upload.wikimedia.org\/wikipedia\/commons\/9\/92\/Instructor_Basics_How_to_Use_Wikipedia_as_a_Teaching_Tool.pdf"},{"issue":"3","key":"pcbi.1007868.ref043","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1177\/2158244011426295","article-title":"Using models in writing instruction: a comparison with native and nonnative speakers of English","volume":"1","author":"R Abbuhl","year":"2011","journal-title":"SAGE Open"},{"key":"pcbi.1007868.ref044","unstructured":"Template:ISCB Wikipedia competition. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Template:ISCB_Wikipedia_competition&oldid=912547043"},{"key":"pcbi.1007868.ref045","unstructured":"Wikipedia:Five pillars. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Wikipedia:Five_pillars&oldid=946235296"},{"key":"pcbi.1007868.ref046","unstructured":"User:Rockpocket\/Training. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=User:Rockpocket\/Training&oldid=495454824"},{"key":"pcbi.1007868.ref047","unstructured":"Wikipedia:The Wikipedia Adventure. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Wikipedia:The_Wikipedia_Adventure&oldid=942795882"},{"key":"pcbi.1007868.ref048","unstructured":"Wikipedia:Sandbox. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Wikipedia:Sandbox&oldid=947994329"},{"key":"pcbi.1007868.ref049","unstructured":"Friedrich P. Feedback as a Gift. Training and Development Magazine. 2012 Jan [cited 2019 Oct 16]. Available from: http:\/\/takechargeinc.com\/wp-content\/uploads\/2012\/01\/Feedback-as-a-Gift-TD-Magazine-01-2012.pdf"},{"key":"pcbi.1007868.ref050","unstructured":"Template:Educational assignment. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Template:Educational_assignment&oldid=577848387"},{"key":"pcbi.1007868.ref051","unstructured":"Wikipedia:Please do not bite the newcomers. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Wikipedia:Please_do_not_bite_the_newcomers&oldid=946821365"},{"issue":"10","key":"pcbi.1007868.ref052","doi-asserted-by":"crossref","first-page":"e1003858","DOI":"10.1371\/journal.pcbi.1003858","article-title":"Ten Simple Rules for Writing a PLOS Ten Simple Rules Article","volume":"10","author":"H Dashnow","year":"2014","journal-title":"PLoS Comput Biol"},{"key":"pcbi.1007868.ref053","unstructured":"Wikipedia:Dispute resolution. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Wikipedia:Dispute_resolution&oldid=898152724"},{"volume-title":"Wikimedian in Residence","author":"E McAndrew","key":"pcbi.1007868.ref054"},{"key":"pcbi.1007868.ref055","unstructured":"Wikipedia:School and university projects. In: Wikipedia [Internet]. San Francisco: Wikimedia [cited 2020 Mar 29]. Available from: https:\/\/en.wikipedia.org\/w\/index.php?title=Wikipedia:School_and_university_projects&oldid=944605150"},{"issue":"5","key":"pcbi.1007868.ref056","doi-asserted-by":"crossref","first-page":"e1006137","DOI":"10.1371\/journal.pcbi.1006137","article-title":"Submit a Topic Page to PLOS Computational Biology and Wikipedia","volume":"14","author":"D Mietchen","year":"2018","journal-title":"PLoS Comput Biol"},{"key":"pcbi.1007868.ref057","article-title":"editors. A taxonomy for learning, teaching and assessing: A revision of Bloom\u2019s taxonomy of educational objectives","author":"LW Anderson","year":"2001","journal-title":"Allyn and Bacon"},{"key":"pcbi.1007868.ref058","unstructured":"Education COSI. In: International Society for Computational Biology Community of Special Interest [Internet]. Leesburg: ISCB [cited 2019 Oct 18]. Available from: http:\/\/cosi.iscb.org\/wiki\/Education:Home"},{"issue":"3","key":"pcbi.1007868.ref059","doi-asserted-by":"crossref","first-page":"233","DOI":"10.1177\/0748730418768120","article-title":"A Clockwork Wikipedia","volume":"33","author":"O Benjakob","year":"2018","journal-title":"J Biol Rhythms"},{"key":"pcbi.1007868.ref060","article-title":"Publish in Wikipedia or perish","author":"D Butler","year":"2008","journal-title":"Nature"}],"container-title":["PLOS Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1007868","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,5,14]],"date-time":"2020-05-14T17:41:53Z","timestamp":1589478113000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1007868"}},"subtitle":[],"editor":[{"given":"Russell","family":"Schwartz","sequence":"first","affiliation":[]}],"short-title":[],"issued":{"date-parts":[[2020,5,14]]},"references-count":60,"journal-issue":{"issue":"5","published-online":{"date-parts":[[2020,5,14]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pcbi.1007868","relation":{},"ISSN":["1553-7358"],"issn-type":[{"type":"electronic","value":"1553-7358"}],"subject":[],"published":{"date-parts":[[2020,5,14]]}}}