{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,4]],"date-time":"2025-11-04T23:37:55Z","timestamp":1762299475035,"version":"3.37.3"},"reference-count":19,"publisher":"Public Library of Science (PLoS)","issue":"8","license":[{"start":{"date-parts":[[2020,8,27]],"date-time":"2020-08-27T00:00:00Z","timestamp":1598486400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["www.ploscompbiol.org"],"crossmark-restriction":false},"short-container-title":["PLoS Comput Biol"],"DOI":"10.1371\/journal.pcbi.1008119","type":"journal-article","created":{"date-parts":[[2020,8,27]],"date-time":"2020-08-27T17:24:05Z","timestamp":1598549045000},"page":"e1008119","update-policy":"https:\/\/doi.org\/10.1371\/journal.pcbi.corrections_policy","source":"Crossref","is-referenced-by-count":12,"title":["Ten simple rules to increase computational skills among biologists with Code Clubs"],"prefix":"10.1371","volume":"16","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-8481-1457","authenticated-orcid":true,"given":"Ada K.","family":"Hagan","sequence":"first","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9359-5194","authenticated-orcid":true,"given":"Nicholas A.","family":"Lesniak","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2374-4048","authenticated-orcid":true,"given":"Marcy J.","family":"Balunas","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5829-6754","authenticated-orcid":true,"given":"Lucas","family":"Bishop","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5284-5521","authenticated-orcid":true,"given":"William L.","family":"Close","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4782-1802","authenticated-orcid":true,"given":"Matthew D.","family":"Doherty","sequence":"additional","affiliation":[]},{"given":"Amanda G.","family":"Elmore","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8248-1631","authenticated-orcid":true,"given":"Kaitlin J.","family":"Flynn","sequence":"additional","affiliation":[]},{"given":"Geoffrey D.","family":"Hannigan","sequence":"additional","affiliation":[]},{"given":"Charlie C.","family":"Koumpouras","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1884-3543","authenticated-orcid":true,"given":"Matthew L.","family":"Jenior","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2322-4085","authenticated-orcid":true,"given":"Ariangela J.","family":"Kozik","sequence":"additional","affiliation":[]},{"given":"Kathryn","family":"McBride","sequence":"additional","affiliation":[]},{"given":"Samara B.","family":"Rifkin","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3488-4169","authenticated-orcid":true,"given":"Joshua M. A.","family":"Stough","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3283-829X","authenticated-orcid":true,"given":"Kelly L.","family":"Sovacool","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3532-9653","authenticated-orcid":true,"given":"Marc A.","family":"Sze","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1638-5307","authenticated-orcid":true,"given":"Sarah","family":"Tomkovich","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3140-537X","authenticated-orcid":true,"given":"Begum D.","family":"Topcuoglu","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6935-4275","authenticated-orcid":true,"given":"Patrick D.","family":"Schloss","sequence":"additional","affiliation":[]}],"member":"340","published-online":{"date-parts":[[2020,8,27]]},"reference":[{"key":"pcbi.1008119.ref001","doi-asserted-by":"crossref","first-page":"e1005871","DOI":"10.1371\/journal.pcbi.1005871","article-title":"Ten simple rules for biologists learning to program","volume":"14","author":"MA Carey","year":"2018","journal-title":"PLoS Comput Biol"},{"key":"pcbi.1008119.ref002","doi-asserted-by":"crossref","first-page":"e1005755","DOI":"10.1371\/journal.pcbi.1005755","article-title":"Unmet needs for analyzing biological big data: A survey of 704 NSF principal investigators","volume":"13","author":"L Barone","year":"2017","journal-title":"PLoS Comput Biol"},{"key":"pcbi.1008119.ref003","article-title":"Software carpentry: Lessons learned","author":"G. Wilson","year":"2016","journal-title":"F1000Research"},{"key":"pcbi.1008119.ref004","doi-asserted-by":"crossref","first-page":"9854","DOI":"10.1073\/pnas.1705783114","article-title":"Null effects of boot camps and short-format training for PhD students in life sciences","volume":"114","author":"DF Feldon","year":"2017","journal-title":"Proceedings of the National Academy of Sciences"},{"key":"pcbi.1008119.ref005","doi-asserted-by":"crossref","first-page":"369","DOI":"10.1007\/s10648-012-9205-z","article-title":"Using spacing to enhance diverse forms of learning: Review of recent research and implications for instruction","volume":"24","author":"SK Carpenter","year":"2012","journal-title":"Educational Psychology Review"},{"key":"pcbi.1008119.ref006","doi-asserted-by":"crossref","first-page":"635","DOI":"10.1007\/s10648-015-9332-4","article-title":"Student instruction should be distributed over long time periods","volume":"27","author":"D. Rohrer","year":"2015","journal-title":"Educational Psychology Review"},{"key":"pcbi.1008119.ref007","doi-asserted-by":"crossref","first-page":"69","DOI":"10.1007\/s10734-010-9366-y","article-title":"The effect of distributed practice on students\u2019 conceptual understanding of statistics","volume":"62","author":"L Bud\u00e9","year":"2010","journal-title":"Higher Education"},{"key":"pcbi.1008119.ref008","doi-asserted-by":"crossref","first-page":"772","DOI":"10.1126\/science.1199327","article-title":"Retrieval practice produces more learning than elaborative studying with concept mapping","volume":"331","author":"JD Karpicke","year":"2011","journal-title":"Science"},{"key":"pcbi.1008119.ref009","doi-asserted-by":"crossref","first-page":"900","DOI":"10.1037\/edu0000001","article-title":"Interleaved practice improves mathematics learning","volume":"107","author":"D Rohrer","year":"2015","journal-title":"Journal of Educational Psychology"},{"key":"pcbi.1008119.ref010","doi-asserted-by":"crossref","first-page":"966","DOI":"10.1126\/science.1152408","article-title":"The critical importance of retrieval for learning","volume":"319","author":"JD Karpicke","year":"2008","journal-title":"Science"},{"key":"pcbi.1008119.ref011","doi-asserted-by":"crossref","first-page":"e1004526","DOI":"10.1371\/journal.pcbi.1004526","article-title":"Ten simple rules for a bioinformatics journal club","volume":"12","author":"A Lonsdale","year":"2016","journal-title":"PLoS Comput Biol"},{"key":"pcbi.1008119.ref012","doi-asserted-by":"crossref","first-page":"e1001745","DOI":"10.1371\/journal.pbio.1001745","article-title":"Best practices for scientific computing","volume":"12","author":"G Wilson","year":"2014","journal-title":"PLoS Biol"},{"key":"pcbi.1008119.ref013","doi-asserted-by":"crossref","unstructured":"Kothiyal A, Murthy S, Iyer S. Think-pair-share in a large CS1 class. Proceedings of the 2014 conference on innovation & technology in computer science education\u2014ITiCSE 14. ACM Press; 2014. doi: 10.1145\/2591708.2591739","DOI":"10.1145\/2591708.2591739"},{"key":"pcbi.1008119.ref014","unstructured":"Stack Overflow. How to create a minimal, reproducible example. 2020 [cited 2020 Aug 6]. Available from: https:\/\/stackoverflow.com\/help\/minimal-reproducible-example"},{"key":"pcbi.1008119.ref015","doi-asserted-by":"crossref","first-page":"135","DOI":"10.1080\/08993408.2011.579808","article-title":"Pair programming in education: A literature review","volume":"21","author":"B Hanks","year":"2011","journal-title":"Computer Science Education"},{"key":"pcbi.1008119.ref016","unstructured":"B\u00f6ckeler B, Siessegger N. On pair programming. 2020 [cited 2020 Aug 6]. Available from: https:\/\/martinfowler.com\/articles\/on-pair-programming.html"},{"key":"pcbi.1008119.ref017","unstructured":"Wickham H, Grolemund G. O\u2019Reilly Media; 2016 [cited 2020 Aug 6]. Available from: https:\/\/r4ds.had.co.nz"},{"key":"pcbi.1008119.ref018","doi-asserted-by":"crossref","first-page":"13","DOI":"10.21105\/jose.00013","article-title":"The Riffomonas reproducible research tutorial series","volume":"1","author":"PD Schloss","year":"2018","journal-title":"Journal of Open Source Education"},{"key":"pcbi.1008119.ref019","doi-asserted-by":"crossref","first-page":"e1000424","DOI":"10.1371\/journal.pcbi.1000424","article-title":"A quick guide to organizing computational biology projects","volume":"5","author":"WS Noble","year":"2009","journal-title":"PLoS Comput Biol"}],"container-title":["PLOS Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1008119","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,8,27]],"date-time":"2020-08-27T17:24:14Z","timestamp":1598549054000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pcbi.1008119"}},"subtitle":[],"editor":[{"given":"Russell","family":"Schwartz","sequence":"first","affiliation":[]}],"short-title":[],"issued":{"date-parts":[[2020,8,27]]},"references-count":19,"journal-issue":{"issue":"8","published-online":{"date-parts":[[2020,8,27]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pcbi.1008119","relation":{},"ISSN":["1553-7358"],"issn-type":[{"type":"electronic","value":"1553-7358"}],"subject":[],"published":{"date-parts":[[2020,8,27]]}}}