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Such fluctuations, observed in neural activity and behavioral strategies, have significant implications for understanding decision-making processes. However, empirical studies on fluctuating human decision-making strategies have been limited due to the extensive data requirements for estimating these fluctuations. Here, we introduce hMFC (Hierarchical Model for Fluctuations in Criterion), a Bayesian framework designed to estimate slow fluctuations in the decision criterion from limited data. We first showcase the importance of considering fluctuations in decision criterion: incorrectly assuming a stable criterion gives rise to apparent history effects and underestimates perceptual sensitivity. We then present a hierarchical estimation procedure capable of reliably recovering the underlying state of the fluctuating decision criterion with as few as 500 trials per participant, offering a robust tool for researchers with typical human datasets. Critically, hMFC does not only accurately recover the state of the underlying decision criterion, it also effectively deals with the confounds caused by criterion fluctuations. Lastly, we provide code and a comprehensive demo to enable widespread application of hMFC in decision-making research.<\/jats:p>","DOI":"10.1371\/journal.pcbi.1013291","type":"journal-article","created":{"date-parts":[[2025,7,29]],"date-time":"2025-07-29T17:44:03Z","timestamp":1753811043000},"page":"e1013291","update-policy":"https:\/\/doi.org\/10.1371\/journal.pcbi.corrections_policy","source":"Crossref","is-referenced-by-count":2,"title":["A Bayesian hierarchical model of trial-to-trial fluctuations in decision criterion"],"prefix":"10.1371","volume":"21","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-0086-8937","authenticated-orcid":true,"given":"Robin","family":"Vloeberghs","sequence":"first","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5270-6513","authenticated-orcid":true,"given":"Anne 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