{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,22]],"date-time":"2026-09-22T08:45:47Z","timestamp":1790066747322,"version":"4.0.1"},"reference-count":34,"publisher":"Public Library of Science (PLoS)","issue":"6","license":[{"start":{"date-parts":[[2015,6,29]],"date-time":"2015-06-29T00:00:00Z","timestamp":1435536000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["www.plosntds.org"],"crossmark-restriction":false},"short-container-title":["PLoS Negl Trop Dis"],"DOI":"10.1371\/journal.pntd.0003892","type":"journal-article","created":{"date-parts":[[2015,6,29]],"date-time":"2015-06-29T14:22:38Z","timestamp":1435587758000},"page":"e0003892","update-policy":"https:\/\/doi.org\/10.1371\/journal.pntd.corrections_policy","source":"Crossref","is-referenced-by-count":39,"title":["Identification of Burkholderia pseudomallei Near-Neighbor Species in the Northern Territory of Australia"],"prefix":"10.1371","volume":"9","author":[{"given":"Jennifer L.","family":"Ginther","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mark","family":"Mayo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Stephanie D.","family":"Warrington","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mirjam","family":"Kaestli","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Travis","family":"Mullins","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"David M.","family":"Wagner","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bart J.","family":"Currie","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Apichai","family":"Tuanyok","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Paul","family":"Keim","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"340","published-online":{"date-parts":[[2015,6,29]]},"reference":[{"key":"ref1","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/j.1462-2920.2010.02343.x","article-title":"The various lifestyles of the <italic>Burkholderia cepacia<\/italic> complex species: a tribute to adaptation","volume":"13","author":"L Vial","year":"2011","journal-title":"Environ Microbiol"},{"key":"ref2","doi-asserted-by":"crossref","DOI":"10.3389\/fgene.2014.00429","article-title":"Molecular signatures and phylogenomic analysis of the genus <italic>Burkholderia<\/italic>: proposal for division of this genus into the emended genus <italic>Burkholderia<\/italic> containing pathogenic organisms and a new genus <italic>Paraburkholderia<\/italic> gen. nov. harboring environmental species","volume":"5","author":"A Sawana","year":"2014","journal-title":"Front Genet"},{"key":"ref3","doi-asserted-by":"crossref","first-page":"607","DOI":"10.1111\/j.1574-6976.2008.00113.x","article-title":"Diversity and occurrence of <italic>Burkholderia<\/italic> spp. in the natural environment","volume":"32","author":"S Compant","year":"2008","journal-title":"FEMS Microbiol Rev"},{"key":"ref4","doi-asserted-by":"crossref","first-page":"362","DOI":"10.1111\/j.1365-2958.2011.07937.x","article-title":"Exposing the third chromosome of <italic>Burkholderia cepacia<\/italic> complex strains as a virulence plasmid","volume":"83","author":"K Agnoli","year":"2012","journal-title":"Molecular Microbiology"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"5111","DOI":"10.1128\/AEM.00335-09","article-title":"Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale","volume":"75","author":"CL Lauber","year":"2009","journal-title":"Appl Environ Microbiol"},{"key":"ref6","doi-asserted-by":"crossref","first-page":"55","DOI":"10.1016\/j.soilbio.2013.01.009","article-title":"Novel <italic>Burkholderia<\/italic> bacteria isolated from <italic>Lebeckia ambigua\u2013<\/italic>A perennial suffrutescent legume of the fynbos","volume":"60","author":"JG Howieson","journal-title":"Soil Biol Biochem"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"1580","DOI":"10.1099\/ijs.0.65634-0","article-title":"<italic>Burkholderia latens<\/italic> sp. nov., <italic>Burkholderia diffusa<\/italic> sp. nov., <italic>Burkholderia arboris<\/italic> sp. nov., <italic>Burkholderia seminalis<\/italic> sp. nov. and <italic>Burkholderia metallica<\/italic> sp. nov., novel species within the <italic>Burkholderia cepacia<\/italic> complex","volume":"58","author":"E Vanlaere","year":"2008","journal-title":"Int J Syst Evol Microbiol"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"300","DOI":"10.1007\/s00284-012-0270-9","article-title":"<italic>Burkholderia humi<\/italic> sp. nov., isolated from peat soil","volume":"66","author":"S Srinivasan","year":"2013","journal-title":"Curr Microbiol"},{"key":"ref9","doi-asserted-by":"crossref","first-page":"e50225","DOI":"10.1371\/journal.pone.0050225","article-title":"<italic>Burkholderia dabaoshanensis<\/italic> sp. nov., a heavy-metal-tolerant bacteria isolated from Dabaoshan mining area soil in China","volume":"7","author":"H Zhu","year":"2012","journal-title":"PLoS One"},{"key":"ref10","doi-asserted-by":"crossref","first-page":"719","DOI":"10.1046\/j.1462-2920.2003.00471.x","article-title":"Diversity and significance of <italic>Burkholderia<\/italic> species occupying diverse ecological niches","volume":"5","author":"T Coenye","year":"2003","journal-title":"Environ Microbiol"},{"key":"ref11","first-page":"904","article-title":"Antibiosis of <italic>Burkholderia ubonensis<\/italic> against <italic>Burkholderia pseudomallei<\/italic>, the causative agent for melioidosis","volume":"41","author":"K Marshall","year":"2010","journal-title":"Southeast Asian J Trop Med Public Health"},{"key":"ref12","doi-asserted-by":"crossref","first-page":"599","DOI":"10.4269\/ajtmh.2008.78.599","article-title":"Expanded range of <italic>Burkholderia<\/italic> species in Australia","volume":"78","author":"A Levy","year":"2008","journal-title":"Am J Trop Med Hyg"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"3917","DOI":"10.1128\/AEM.71.7.3917-3927.2005","article-title":"Development of a <italic>recA<\/italic> gene-based identification approach for the entire <italic>Burkholderia<\/italic> genus","volume":"71","author":"GW Payne","year":"2005","journal-title":"Appl Environ Microbiol"},{"key":"ref14","doi-asserted-by":"crossref","first-page":"126","DOI":"10.1111\/j.1574-6968.2006.00257.x","article-title":"Application of a <italic>recA<\/italic> gene-based identification approach to the maize rhizosphere reveals novel diversity in <italic>Burkholderia<\/italic> species","volume":"259","author":"GW Payne","year":"2006","journal-title":"FEMS Microbiol Lett"},{"key":"ref15","doi-asserted-by":"crossref","first-page":"85","DOI":"10.1128\/JCM.44.1.85-90.2006","article-title":"Development and evaluation of a real-time PCR assay targeting the type III secretion system of <italic>Burkholderia pseudomallei<\/italic>","volume":"44","author":"R Novak","year":"2006","journal-title":"J Clin Microbiol"},{"key":"ref16","doi-asserted-by":"crossref","first-page":"9044","DOI":"10.1128\/JB.01264-07","article-title":"A horizontal gene transfer event defines two distinct groups within <italic>Burkholderia pseudomallei<\/italic> that have dissimilar geographic distributions","volume":"189","author":"A Tuanyok","year":"2007","journal-title":"J Bacteriol"},{"key":"ref17","doi-asserted-by":"crossref","first-page":"56","DOI":"10.1186\/1471-2180-12-56","article-title":"BactQuant: an enhanced broad-coverage bacterial quantitative real-time PCR assay","volume":"12","author":"CM Liu","year":"2012","journal-title":"BMC Microbiol"},{"key":"ref18","first-page":"759","article-title":"Successful amplification of extremely GC-rich promoter regions using a novel &apos;slowdown PCR&apos; technique","volume":"13","author":"HS Bachmann","year":"2003","journal-title":"Pharmacogenetics"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"1312","DOI":"10.1038\/nprot.2008.112","article-title":"PCR-amplification of GC-rich regions: &apos;slowdown PCR&apos;","volume":"3","author":"UH Frey","year":"2008","journal-title":"Nat Protoc"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"257","DOI":"10.1099\/00221287-148-1-257","article-title":"Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set","volume":"148","author":"MA Nadkarni","year":"2002","journal-title":"Microbiology"},{"key":"ref21","doi-asserted-by":"crossref","first-page":"2947","DOI":"10.1093\/bioinformatics\/btm404","article-title":"Clustal W and Clustal X version 2.0","volume":"23","author":"MA Larkin","year":"2007","journal-title":"Bioinformatics"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"772","DOI":"10.1038\/nmeth.2109","article-title":"jModelTest 2: more models, new heuristics and parallel computing","volume":"9","author":"D Darriba","year":"2012","journal-title":"Nat Meth"},{"key":"ref23","doi-asserted-by":"crossref","first-page":"5359","DOI":"10.1128\/JCM.43.10.5359-5361.2005","article-title":"Comparison of Ashdown&apos;s medium, <italic>Burkholderia cepacia<\/italic> medium, and <italic>Burkholderia pseudomallei<\/italic> selective agar for clinical isolation of <italic>Burkholderia pseudomallei<\/italic>","volume":"43","author":"SJ Peacock","year":"2005","journal-title":"J Clin Microbiol"},{"key":"ref24","doi-asserted-by":"crossref","first-page":"1023","DOI":"10.4269\/ajtmh.2009.80.1023","article-title":"Comparison of four selective media for the isolation of <italic>Burkholderia mallei<\/italic> and <italic>Burkholderia pseudomallei<\/italic>","volume":"80","author":"MB Glass","year":"2009","journal-title":"Am J Trop Med Hyg"},{"key":"ref25","doi-asserted-by":"crossref","first-page":"9044","DOI":"10.1128\/JB.01264-07","article-title":"A horizontal gene transfer event defines two distinct groups within Burkholderia pseudomallei that have dissimilar geographic distributions","volume":"189","author":"A Tuanyok","year":"2007","journal-title":"Journal of bacteriology"},{"key":"ref26","doi-asserted-by":"crossref","first-page":"37","DOI":"10.1016\/j.diagmicrobio.2005.11.007","article-title":"Development of a polymerase chain reaction assay for the specific identification of <italic>Burkholderia mallei<\/italic> and differentiation from <italic>Burkholderia pseudomallei<\/italic> and other closely related <italic>Burkholderiaceae<\/italic>","volume":"55","author":"RL Ulrich","year":"2006","journal-title":"Diagn Microbiol Infect Dis"},{"key":"ref27","doi-asserted-by":"crossref","first-page":"e1453","DOI":"10.1371\/journal.pntd.0001453","article-title":"The genetic and molecular basis of O-antigenic diversity in <italic>Burkholderia pseudomallei<\/italic> lipopolysaccharide","volume":"6","author":"A Tuanyok","year":"2012","journal-title":"PLoS Negl Trop Dis"},{"key":"ref28","doi-asserted-by":"crossref","first-page":"111","DOI":"10.1055\/s-0034-1398389","article-title":"Melioidosis: evolving concepts in epidemiology, pathogenesis, and treatment","volume":"36","author":"BJ Currie","year":"2015","journal-title":"Semin Respir Crit Care Med"},{"key":"ref29","doi-asserted-by":"crossref","first-page":"54","DOI":"10.1186\/1471-2180-8-54","article-title":"Recovery of a <italic>Burkholderia thailandensis<\/italic>-like isolate from an Australian water source","volume":"8","author":"J Gee","year":"2008","journal-title":"BMC Microbiol"},{"key":"ref30","doi-asserted-by":"crossref","first-page":"e364","DOI":"10.1371\/journal.pntd.0000364","article-title":"Landscape changes influence the occurrence of the melioidosis bacterium <italic>Burkholderia pseudomallei<\/italic> in soil in northern Australia","volume":"3","author":"M Kaestli","year":"2009","journal-title":"PLoS Negl Trop Dis"},{"key":"ref31","doi-asserted-by":"crossref","first-page":"2058","DOI":"10.1111\/j.1462-2920.2011.02671.x","article-title":"Out of the ground: aerial and exotic habitats of the melioidosis bacterium <italic>Burkholderia pseudomallei<\/italic> in grasses in Australia","volume":"14","author":"M Kaestli","year":"2012","journal-title":"Environ Microbiol"},{"key":"ref32","doi-asserted-by":"crossref","first-page":"14240","DOI":"10.1073\/pnas.0403302101","article-title":"Genomic plasticity of the causative agent of melioidosis, <italic>Burkholderia pseudomallei<\/italic>","volume":"101","author":"MTG Holden","year":"2004","journal-title":"PNAS"},{"key":"ref33","doi-asserted-by":"crossref","first-page":"117","DOI":"10.1111\/j.1574-6968.1996.tb08517.x","article-title":"Genomic complexity and plasticity of <italic>Burkholderia cepacia<\/italic>","volume":"144","author":"TG Lessie","year":"1996","journal-title":"FEMS Microbiol Lett"},{"key":"ref34","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1471-2180-12-250","article-title":"Detection of <italic>Burkholderia pseudomallei<\/italic> O-antigen serotypes in near-neighbor species","volume":"12","author":"J Stone","year":"2012","journal-title":"BMC Microbiol"}],"container-title":["PLOS Neglected Tropical Diseases"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pntd.0003892","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,8,27]],"date-time":"2019-08-27T16:19:29Z","timestamp":1566922769000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pntd.0003892"}},"subtitle":[],"editor":[{"given":"Ruifu","family":"Yang","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2015,6,29]]},"references-count":34,"journal-issue":{"issue":"6","published-online":{"date-parts":[[2015,6,29]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pntd.0003892","relation":{},"ISSN":["1935-2735"],"issn-type":[{"value":"1935-2735","type":"electronic"}],"subject":[],"published":{"date-parts":[[2015,6,29]]}}}