{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,11,4]],"date-time":"2026-11-04T14:11:27Z","timestamp":1793801487881,"version":"4.6.1"},"update-to":[{"DOI":"10.1371\/journal.pntd.0006538","type":"new_version","label":"New version","source":"publisher","updated":{"date-parts":[[2018,6,14]],"date-time":"2018-06-14T00:00:00Z","timestamp":1528934400000}}],"reference-count":36,"publisher":"Public Library of Science (PLoS)","issue":"6","license":[{"start":{"date-parts":[[2018,6,4]],"date-time":"2018-06-04T00:00:00Z","timestamp":1528070400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100004901","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de Minas Gerais","doi-asserted-by":"publisher","award":["APQ01574-17"],"award-info":[{"award-number":["APQ01574-17"]}],"id":[{"id":"10.13039\/501100004901","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003593","name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","doi-asserted-by":"publisher","award":["440593\/2016-6"],"award-info":[{"award-number":["440593\/2016-6"]}],"id":[{"id":"10.13039\/501100003593","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico (BR)","award":["440911\/2016-8"],"award-info":[{"award-number":["440911\/2016-8"]}]},{"name":"ERDF from European Commission","award":["RESERVOIRS"],"award-info":[{"award-number":["RESERVOIRS"]}]},{"DOI":"10.13039\/501100002322","name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","doi-asserted-by":"publisher","award":["Scholarship"],"award-info":[{"award-number":["Scholarship"]}],"id":[{"id":"10.13039\/501100002322","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100002322","name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","doi-asserted-by":"publisher","award":["Scholarship"],"award-info":[{"award-number":["Scholarship"]}],"id":[{"id":"10.13039\/501100002322","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Institute Pasteur."},{"DOI":"10.13039\/501100007375","name":"Pr\u00f3-Reitoria de Pesquisa, Universidade Federal de Minas Gerais","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100007375","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["www.plosntds.org"],"crossmark-restriction":false},"short-container-title":["PLoS Negl Trop Dis"],"DOI":"10.1371\/journal.pntd.0006538","type":"journal-article","created":{"date-parts":[[2018,6,4]],"date-time":"2018-06-04T13:35:43Z","timestamp":1528119343000},"page":"e0006538","update-policy":"https:\/\/doi.org\/10.1371\/journal.pntd.corrections_policy","source":"Crossref","is-referenced-by-count":85,"title":["Persistence of Yellow fever virus outside the Amazon Basin, causing epidemics in Southeast Brazil, from 2016 to 2018"],"prefix":"10.1371","volume":"12","author":[{"given":"Izabela Maur\u00edcio de","family":"Rezende","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"L\u00edvia","family":"Sacchetto","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"\u00c9rica","family":"Munhoz de Mello","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pedro Augusto","family":"Alves","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3629-8529","authenticated-orcid":true,"given":"Felipe Campos de Melo","family":"Iani","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Talita \u00c9mile Ribeiro","family":"Adelino","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Myrian Morato","family":"Duarte","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ana Lu\u00edsa Furtado","family":"Cury","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andr\u00e9 Felipe Leal","family":"Bernardes","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tayrine Ara\u00fajo","family":"Santos","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Leonardo Soares","family":"Pereira","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Maria Rita Teixeira","family":"Dutra","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dario Brock","family":"Ramalho","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Benoit","family":"de Thoisy","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Erna Geessien","family":"Kroon","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Giliane de Souza","family":"Trindade","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4049-4055","authenticated-orcid":true,"given":"Bet\u00e2nia Paiva","family":"Drumond","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"340","published-online":{"date-parts":[[2018,6,4]]},"reference":[{"key":"ref1","doi-asserted-by":"crossref","first-page":"1144","DOI":"10.1590\/S0034-89102010005000046","article-title":"Yellow fever in Brazil: thoughts and hypotheses on the emergence in previously free areas","volume":"44","author":"PF da C Vasconcelos","year":"2010","journal-title":"Rev Saude Publica"},{"key":"ref2","unstructured":"Minist\u00e9rio da Sa\u00fade. Reemerg\u00eancia da Febre Amarela Silvestre no Brasil, 2014\/2015: situa\u00e7\u00e3o epidemiol\u00f3gica e a import\u00e2ncia da vacina\u00e7\u00e3o preventiva e da vigil\u00e2ncia intensificada no per\u00edodo sazonal. In: v 46 n 29. 2015. doi:2358\u20139450"},{"key":"ref3","first-page":"275","article-title":"Yellow Fever","volume":"36","author":"PF da C Vasconcelos","year":"2003","journal-title":"Rev Soc Bras Med Trop"},{"key":"ref4","doi-asserted-by":"crossref","first-page":"527","DOI":"10.5123\/S1679-49742011000400012","article-title":"Epizootias em primatas n\u00e3o humanos durante reemerg\u00eancia do v\u00edrus da febre amarela no Brasil, 2007 a 2009","volume":"20","author":"FAA Ara\u00fajo","year":"2011","journal-title":"Epidemiol e Servi\u00e7os Sa\u00fade"},{"key":"ref5","unstructured":"Minist\u00e9rio da Sa\u00fade. DATASUS\u2014Febre Amarela. In: 2007\u20132018 [Internet]. [cited 23 Apr 2018]. Available: http:\/\/www2.datasus.gov.br\/DATASUS\/index.php?area=0203&id=29892110&VObj=http:\/\/tabnet.datasus.gov.br\/cgi\/deftohtm.exe?sinannet\/cnv\/febreamarela<\/ext-link>"},{"key":"ref6","unstructured":"Minist\u00e9rio da Sa\u00fade. Emerg\u00eancia epidemiol\u00f3gica de febre amarela no Brasil, no per\u00edodo de dezembro de 2016 a julho de 2017. In: v. 48 n. 28 [Internet]. 2017 [cited 1 Dec 2017]. Available: http:\/\/portalarquivos2.saude.gov.br\/images\/pdf\/2017\/setembro\/06\/2017_027.pdf<\/ext-link>"},{"key":"ref7","unstructured":"Secretaria Estadual de Sa\u00fade \/ SES-MG. Informe Epidemiol\u00f3gico da Febre Amarela 17\/04. 2018; 12. Available: http:\/\/www.saude.mg.gov.br\/images\/noticias_e_eventos\/000_2018\/01-jan-fev-marc-abril\/Boletins_Febre_Amarela\/Boletim_-_Febre_Amarela_17_de_abril_de_2018.pdf<\/ext-link>"},{"key":"ref8","unstructured":"Minist\u00e9rio da Sa\u00fade. Monitoramento do per\u00edodo sazonal da Febre Amarela\u2014Brasil 2017\/2018. In: 11\/04 [Internet]. 2018 p. 11. Available: http:\/\/portalarquivos2.saude.gov.br\/images\/pdf\/2018\/abril\/12\/Informe-FA-21-11abr18-c.pdf<\/ext-link>"},{"key":"ref9","unstructured":"Secretaria Estadual de Sa\u00fade \/ SES-MG. Informes Febre Amarela [Internet]. 2018 [cited 23 Apr 2018]. Available: http:\/\/www.saude.mg.gov.br\/febreamarela<\/ext-link>"},{"key":"ref10","unstructured":"Secretaria Estadual de Sa\u00fade \/ SES-MG. Informe Epidemiol\u00f3gico da Febre Amarela 05\/01 [Internet]. 2018 [cited 23 Apr 2018]. Available: http:\/\/www.saude.mg.gov.br\/images\/Boletim_FA_05_01_18.pdf<\/ext-link>"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"536","DOI":"10.1099\/jgv.0.001033","article-title":"Genomic and structural features of the yellow fever virus from the 2016\u20132017 Brazilian outbreak","volume":"99","author":"MM G\u00f3mez","year":"2018","journal-title":"J Gen Virol"},{"key":"ref12","article-title":"Evidence for Multiple Sylvatic Transmission Cycles During the 2016\u20132017 Yellow Fever Virus Outbreak, Brazil","author":"A Moreira-Soto","year":"2018","journal-title":"Clin Microbiol Infect"},{"key":"ref13","first-page":"1","article-title":"Phylodynamics of Yellow Fever Virus in the Americas: new insights into the origin of the 2017 Brazilian outbreak","author":"D Mir","year":"2017"},{"key":"ref14","doi-asserted-by":"crossref","first-page":"4054","DOI":"10.1128\/JCM.01799-12","article-title":"Advanced Yellow Fever Virus Genome Detection in Point-of-Care Facilities and Reference Laboratories","volume":"50","author":"C Domingo","year":"2012","journal-title":"J Clin Microbiol"},{"key":"ref15","doi-asserted-by":"crossref","first-page":"114","DOI":"10.1016\/j.actatropica.2016.09.030","article-title":"Isolation and characterization of a Brazilian strain of yellow fever virus from an epizootic outbreak in 2009","volume":"166","author":"TR Jorge","year":"2017","journal-title":"Acta Trop"},{"key":"ref16","doi-asserted-by":"crossref","first-page":"90","DOI":"10.7171\/jbt.12-2303-004","article-title":"Seqtrace: A graphical tool for rapidly processing DNA sequencing chromatograms","volume":"23","author":"BJ Stucky","year":"2012","journal-title":"J Biomol Tech"},{"key":"ref17","first-page":"39","article-title":"Multiple Alignment of DNA Sequences with MAFFT","author":"K Katoh","year":"2009","journal-title":"Multiple Alignment of DNA Sequences with MAFFT"},{"key":"ref18","doi-asserted-by":"crossref","first-page":"307","DOI":"10.1093\/sysbio\/syq010","article-title":"New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0","volume":"59","author":"S Guindon","year":"2010","journal-title":"Syst Biol"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"2422","DOI":"10.1093\/molbev\/msx149","article-title":"SMS: Smart Model Selection in PhyML","volume":"34","author":"V Lefort","year":"2017","journal-title":"Mol Biol Evol"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"vew007","DOI":"10.1093\/ve\/vew007","article-title":"Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen)","volume":"2","author":"A Rambaut","year":"2016","journal-title":"Virus Evol"},{"key":"ref21","doi-asserted-by":"crossref","first-page":"214","DOI":"10.1186\/1471-2148-7-214","article-title":"BEAST: Bayesian evolutionary analysis by sampling trees","volume":"7","author":"AJ Drummond","journal-title":"BMC Evol Biol"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"2157","DOI":"10.1093\/molbev\/mss084","article-title":"Improving the Accuracy of Demographic and Molecular Clock Model Comparison While Accommodating Phylogenetic Uncertainty","volume":"29","author":"G Baele","year":"2012","journal-title":"Mol Biol Evol"},{"key":"ref23","unstructured":"Rambaut A, Suchard MA, Xie D, Drummond AJ. Tracer [Internet]. 2014. Available: http:\/\/beast.bio.ed.ac.uk\/Tracer<\/ext-link>"},{"key":"ref24","unstructured":"Rambaut A, Drummond AJ. TreeAnnotator [Internet]. 2015. Available: http:\/\/beast.bio.ed.ac.uk<\/ext-link>"},{"key":"ref25","unstructured":"Rambaut A, Drummond AJ. LogCombiner v1.8.2- MCMC Output Combiner. Available: http:\/\/beast.bio.ed.ac.uk\/<\/ext-link>"},{"key":"ref26","unstructured":"Rambaut A. FigTree [Internet]. 2014. Available: http:\/\/tree.bio.ed.ac.uk\/software\/figtree\/<\/ext-link>"},{"key":"ref27","unstructured":"Minist\u00e9rio da Sa\u00fade. DATASUS\u2014Febre Amarela. In: 2001\u20132006 [Internet]. [cited 23 Apr 2018]. Available: http:\/\/www2.datasus.gov.br\/DATASUS\/index.php?area=0203&id=30009991&VObj=http:\/\/tabnet.datasus.gov.br\/cgi\/deftohtm.exe?sinanwin\/cnv\/febreamarela<\/ext-link>"},{"key":"ref28","unstructured":"Secretaria Estadual de Sa\u00fade \/ SES-SP. BOLETIM EPIDEMIOL\u00d3GICO FEBRE AMARELA\u2013 2017 Situa\u00e7\u00e3o Epidemiol\u00f3gica [Internet]. 2017 [cited 23 Apr 2018] p. 6. Available: file:\/\/\/C:\/Users\/Izabela\/Downloads\/fa17_1boletim_epidemiologico.pdf<\/ext-link>"},{"key":"ref29","unstructured":"Minist\u00e9rio da Sa\u00fade. Monitoramento do Per\u00edodo Sazonal da Febre Amarela Brasil\u2013 2017\/2018. In: 16\/01 [Internet]. 2018 [cited 1 Feb 2018]. Available: http:\/\/portalarquivos2.saude.gov.br\/images\/pdf\/2018\/janeiro\/16\/informe-febre-amarela-9-16jan18.pdf<\/ext-link>. 2018"},{"key":"ref30","unstructured":"Secretaria Estadual de Sa\u00fade \/ SES-MG. Boletim Epidemiol\u00f3gico, Febre Amarela, Minas Gerais, 2017. In: 20\/11 [Internet]. 2017. Available: http:\/\/www.saude.mg.gov.br\/images\/Epidemiologia\/Boletins_Dengue\/BO_FA_20_11_2017.pdf<\/ext-link>"},{"key":"ref31","doi-asserted-by":"crossref","first-page":"e270","DOI":"10.1016\/S2214-109X(18)30024-X","article-title":"Existing and potential infection risk zones of yellow fever worldwide: a modelling analysis","volume":"6","author":"FM Shearer","year":"2018","journal-title":"Lancet Glob Heal"},{"key":"ref32","unstructured":"Secretaria Estadual de Sa\u00fade \/ SES-MG. Cobertura Vacinal da Febre Amarela em Minas Gerais 2007\u20132016. [Internet]. 2017. Available: http:\/\/www.saude.mg.gov.br\/historicofebreamarela<\/ext-link>"},{"key":"ref33","unstructured":"QGIS Development Team (YEAR). QGIS Geographic Information System [Internet]. 2009. Available: http:\/\/qgis.osgeo.org<\/ext-link>"},{"key":"ref34","unstructured":"IBGE. Instituto Brasileiro de Geografia e Estat\u00edstica [Internet]. 2018 [cited 2 Dec 2018]. Available: https:\/\/www.ibge.gov.br\/<\/ext-link>"},{"key":"ref35","unstructured":"Minist\u00e9rio do Meio Ambiente\u2014MMA. Download de dados geogr\u00e1ficos [Internet]. 2018 [cited 2 Dec 2017]. Available: http:\/\/mapas.mma.gov.br\/i3geo\/datadownload.htm<\/ext-link>"},{"key":"ref36","unstructured":"Minist\u00e9rio da Sa\u00fade. Febre Amarela: Minist\u00e9rio da Sa\u00fade atualiza casos no pa\u00eds. In: 03-01-2018 [Internet]. 2018 [cited 3 Mar 2018]. Available: http:\/\/portalms.saude.gov.br\/noticias\/agencia-saude\/42655-febre-amarela-ministerio-da-saude-atualiza-casos-no-pais<\/ext-link>"}],"updated-by":[{"DOI":"10.1371\/journal.pntd.0006538","type":"new_version","label":"New version","source":"publisher","updated":{"date-parts":[[2018,6,14]],"date-time":"2018-06-14T00:00:00Z","timestamp":1528934400000}}],"container-title":["PLOS Neglected Tropical Diseases"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pntd.0006538","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2018,10,23]],"date-time":"2018-10-23T18:02:49Z","timestamp":1540317769000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pntd.0006538"}},"subtitle":[],"editor":[{"given":"Benjamin","family":"Althouse","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2018,6,4]]},"references-count":36,"journal-issue":{"issue":"6","published-online":{"date-parts":[[2018,6,4]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pntd.0006538","relation":{"is-supplemented-by":[{"id-type":"doi","id":"10.17504\/protocols.io.pw7dphn","asserted-by":"object"},{"id-type":"doi","id":"10.17504\/protocols.io.pw6dphe","asserted-by":"object"},{"id-type":"doi","id":"10.17504\/protocols.io.pw8dphw","asserted-by":"object"},{"id-type":"doi","id":"10.17504\/protocols.io.pxbdpin","asserted-by":"object"},{"id-type":"doi","id":"10.17504\/protocols.io.pxadpie","asserted-by":"object"},{"id-type":"doi","id":"10.17504\/protocols.io.pw9dph6","asserted-by":"object"}]},"ISSN":["1935-2735"],"issn-type":[{"value":"1935-2735","type":"electronic"}],"subject":[],"published":{"date-parts":[[2018,6,4]]}}}