{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,26]],"date-time":"2026-09-26T11:18:19Z","timestamp":1790421499862,"version":"4.1.0"},"update-to":[{"DOI":"10.1371\/journal.pntd.0007412","type":"new_version","label":"New version","source":"publisher","updated":{"date-parts":[[2019,5,28]],"date-time":"2019-05-28T00:00:00Z","timestamp":1559001600000}}],"reference-count":121,"publisher":"Public Library of Science (PLoS)","issue":"5","license":[{"start":{"date-parts":[[2019,5,15]],"date-time":"2019-05-15T00:00:00Z","timestamp":1557878400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100000060","name":"National Institute of Allergy and Infectious Diseases","doi-asserted-by":"publisher","award":["U19AI089681"],"award-info":[{"award-number":["U19AI089681"]}],"id":[{"id":"10.13039\/100000060","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000060","name":"National Institute of Allergy and Infectious Diseases","doi-asserted-by":"publisher","award":["R01AI110112"],"award-info":[{"award-number":["R01AI110112"]}],"id":[{"id":"10.13039\/100000060","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100004423","name":"World Health Organization","doi-asserted-by":"publisher","award":["TDR 201460655"],"award-info":[{"award-number":["TDR 201460655"]}],"id":[{"id":"10.13039\/100004423","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000060","name":"National Institute of Allergy and Infectious Diseases","doi-asserted-by":"publisher","award":["T32AI05532901"],"award-info":[{"award-number":["T32AI05532901"]}],"id":[{"id":"10.13039\/100000060","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["www.plosntds.org"],"crossmark-restriction":false},"short-container-title":["PLoS Negl Trop Dis"],"DOI":"10.1371\/journal.pntd.0007412","type":"journal-article","created":{"date-parts":[[2019,5,15]],"date-time":"2019-05-15T17:35:42Z","timestamp":1557941742000},"page":"e0007412","update-policy":"https:\/\/doi.org\/10.1371\/journal.pntd.corrections_policy","source":"Crossref","is-referenced-by-count":27,"title":["Malaria vector species in Amazonian Peru co-occur in larval habitats but have distinct larval microbial communities"],"prefix":"10.1371","volume":"13","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6425-6839","authenticated-orcid":true,"given":"Catharine","family":"Prussing","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marlon P.","family":"Saavedra","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sara A.","family":"Bickersmith","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Freddy","family":"Alava","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mitchel","family":"Guzm\u00e1n","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0196-0818","authenticated-orcid":true,"given":"Edgar","family":"Manrique","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6945-0419","authenticated-orcid":true,"given":"Gabriel","family":"Carrasco-Escobar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marta","family":"Moreno","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dionicia","family":"Gamboa","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Joseph M.","family":"Vinetz","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jan E.","family":"Conn","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"340","published-online":{"date-parts":[[2019,5,15]]},"reference":[{"key":"ref1","unstructured":"WHO. World Malaria Report 2018. Geneva: 2018."},{"key":"ref2","first-page":"345","article-title":"Adv Parasitol","volume":"99","author":"YA Williams","year":"2018"},{"key":"ref3","article-title":"Towards Malaria Elimination\u2014A Leap Forward","author":"JE Conn","year":"2018"},{"key":"ref4","doi-asserted-by":"crossref","first-page":"330","DOI":"10.1186\/1475-2875-13-330","article-title":"Characterizing, controlling and eliminating residual malaria transmission","volume":"13","author":"GF Killeen","year":"2014","journal-title":"Malar J"},{"issue":"11","key":"ref5","doi-asserted-by":"crossref","first-page":"170758","DOI":"10.1098\/rsos.170758","article-title":"Phylogeny of Anophelinae using mitochondrial protein coding genes","volume":"4","author":"PG Foster","year":"2017","journal-title":"Royal Society Open Science"},{"issue":"4","key":"ref6","doi-asserted-by":"crossref","first-page":"391","DOI":"10.1590\/S0074-02761996000400001","article-title":"Biological variation in <italic>Anopheles darlingi<\/italic> Root","volume":"91","author":"JD Charlwood","year":"1996","journal-title":"Mem Inst Oswaldo Cruz"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"177","DOI":"10.1186\/1756-3305-4-177","article-title":"Ecology of <italic>Anopheles darlingi<\/italic> Root with respect to vector importance: a review","volume":"4","author":"H Hiwat","year":"2011","journal-title":"Parasit Vectors"},{"issue":"2","key":"ref8","doi-asserted-by":"crossref","first-page":"e0005337","DOI":"10.1371\/journal.pntd.0005337","article-title":"Intensive trapping of blood-fed <italic>Anopheles darlingi<\/italic> in Amazonian Peru reveals unexpectedly high proportions of avian blood-meals","volume":"11","author":"M Moreno","year":"2017","journal-title":"PLoS Negl Trop Dis"},{"issue":"1","key":"ref9","doi-asserted-by":"crossref","first-page":"86","DOI":"10.1186\/s12936-018-2234-4","article-title":"Decreasing proportion of <italic>Anopheles darlingi<\/italic> biting outdoors between long-lasting insecticidal net distributions in peri-Iquitos, Amazonian Peru","volume":"17","author":"C Prussing","year":"2018","journal-title":"Malar J"},{"issue":"2","key":"ref10","doi-asserted-by":"crossref","DOI":"10.1136\/bmjgh-2016-000211","article-title":"Developing an expanded vector control toolbox for malaria elimination","volume":"2","author":"GF Killeen","year":"2017","journal-title":"BMJ Global Health"},{"key":"ref11","first-page":"Cd008923","article-title":"Mosquito larval source management for controlling malaria","volume":"8","author":"LS Tusting","year":"2013","journal-title":"Cochrane Database Syst Rev"},{"key":"ref12","first-page":"116","article-title":"Larval source management\u2014A supplementary measure for malaria vector control: An operational manual","year":"2013"},{"issue":"8","key":"ref13","doi-asserted-by":"crossref","first-page":"e1000303","DOI":"10.1371\/journal.pmed.1000303","article-title":"Ecology: A Prerequisite for Malaria Elimination and Eradication","volume":"7","author":"HM Ferguson","year":"2010","journal-title":"PLoS Med"},{"key":"ref14","first-page":"397","article-title":"Anopheles mosquitoes\u2014New insights into malaria vectors","author":"E Rejm\u00e1nkov\u00e1","year":"2013"},{"key":"ref15","unstructured":"MINSA. Ministerio de Salud del Per\u00fa: Sala de Situaci\u00f3n de Salud: Epidemiol\u00f3gica N\u00b0 34\u20132018. 2018."},{"key":"ref16","doi-asserted-by":"crossref","first-page":"40350","DOI":"10.1038\/srep40350","article-title":"Spatio-temporal analysis of malaria incidence in the Peruvian Amazon Region between 2002 and 2013","volume":"7","author":"V Soto-Calle","year":"2017","journal-title":"Sci Rep"},{"issue":"6 Suppl","key":"ref17","doi-asserted-by":"crossref","first-page":"133","DOI":"10.4269\/ajtmh.16-0268","article-title":"Epidemiology of <italic>Plasmodium vivax<\/italic> Malaria in Peru","volume":"95","author":"A Rosas-Aguirre","year":"2016","journal-title":"Am J Trop Med Hyg"},{"key":"ref18","unstructured":"WHO. World Malaria Report 2017. Geneva: 2017."},{"issue":"2","key":"ref19","doi-asserted-by":"crossref","first-page":"209","DOI":"10.3201\/eid0502.990204","article-title":"Malaria reemergence in the Peruvian Amazon region","volume":"5","author":"J Aramburu Guarda","year":"1999","journal-title":"Emerg Infect Dis"},{"key":"ref20","first-page":"5","article-title":"Linking deforestation to malaria in the Amazon: Characterization of the breeding habitat of the principal malaria vector, <italic>Anopheles darlingi<\/italic>","volume":"81","author":"AY Vittor","year":"2009","journal-title":"Am J Trop Med Hyg"},{"issue":"1","key":"ref21","doi-asserted-by":"crossref","first-page":"375","DOI":"10.1186\/s12936-015-0863-4","article-title":"Evidence for temporal population replacement and the signature of ecological adaptation in a major Neotropical malaria vector in Amazonian Peru","volume":"14","author":"W Lainhart","year":"2015","journal-title":"Malar J"},{"issue":"6","key":"ref22","doi-asserted-by":"crossref","first-page":"643","DOI":"10.1017\/S0007485311000265","article-title":"Spatial clustering and longitudinal variation of Anopheles darlingi (Diptera: Culicidae) larvae in a river of the Amazon: the importance of the forest fringe and of obstructions to flow in frontier malaria","volume":"101","author":"FS de Barros","year":"2011","journal-title":"Bull Entomol Res"},{"issue":"1","key":"ref23","doi-asserted-by":"crossref","first-page":"452","DOI":"10.1186\/s12936-015-0947-1","article-title":"Contribution of fish farming ponds to the production of immature Anopheles spp. in a malaria-endemic Amazonian town","volume":"14","author":"IC dos Reis","year":"2015","journal-title":"Malar J"},{"issue":"5","key":"ref24","doi-asserted-by":"crossref","first-page":"939","DOI":"10.4269\/ajtmh.15-0042","article-title":"Deforestation and Malaria on the Amazon Frontier: Larval Clustering of Anopheles darlingi (Diptera: Culicidae) Determines Focal Distribution of Malaria","volume":"93","author":"FS de Barros","year":"2015","journal-title":"Am J Trop Med Hyg"},{"key":"ref25","doi-asserted-by":"crossref","first-page":"243","DOI":"10.1016\/j.actatropica.2016.08.032","article-title":"Larval habitats of <italic>Anopheles<\/italic> species in a rural settlement on the malaria frontier of southwest Amazon, Brazil","volume":"164","author":"P Rufalco-Moutinho","year":"2016","journal-title":"Acta Trop"},{"key":"ref26","doi-asserted-by":"crossref","first-page":"112","DOI":"10.1016\/j.actatropica.2010.02.011","article-title":"Risk of malaria transmission from fish ponds in the Peruvian Amazon","volume":"115","author":"M Maheu-Giroux","year":"2010","journal-title":"Acta Trop"},{"issue":"11","key":"ref27","doi-asserted-by":"crossref","first-page":"2727","DOI":"10.1111\/mec.12771","article-title":"Mosquitoes rely on their gut microbiota for development","volume":"23","author":"KL Coon","year":"2014","journal-title":"Mol Ecol"},{"issue":"5","key":"ref28","doi-asserted-by":"crossref","first-page":"e1000423","DOI":"10.1371\/journal.ppat.1000423","article-title":"Implication of the Mosquito Midgut Microbiota in the Defense against Malaria Parasites","volume":"5","author":"Y Dong","year":"2009","journal-title":"PLoS Pathog"},{"issue":"6031","key":"ref29","doi-asserted-by":"crossref","first-page":"855","DOI":"10.1126\/science.1201618","article-title":"Natural Microbe-Mediated Refractoriness to <italic>Plasmodium<\/italic> Infection in <italic>Anopheles gambiae<\/italic>","volume":"332","author":"CM Cirimotich","year":"2011","journal-title":"Science"},{"issue":"3","key":"ref30","doi-asserted-by":"crossref","first-page":"371","DOI":"10.1603\/0022-2585-40.3.371","article-title":"Bacteria in midguts of field-collected <italic>Anopheles albimanus<\/italic> block <italic>Plasmodium vivax<\/italic> sporogonic development","volume":"40","author":"L Gonzalez-Ceron","year":"2003","journal-title":"J Med Entomol"},{"issue":"1","key":"ref31","doi-asserted-by":"crossref","first-page":"2084","DOI":"10.1038\/s41598-018-20367-4","article-title":"Whole metagenome sequencing reveals links between mosquito microbiota and insecticide resistance in malaria vectors","volume":"8","author":"N Dada","year":"2018","journal-title":"Sci Rep"},{"issue":"2","key":"ref32","doi-asserted-by":"crossref","first-page":"214","DOI":"10.4269\/ajtmh.1996.54.214","article-title":"Bacterial population dynamics in three anopheline species: the impact on <italic>Plasmodium<\/italic> sporogonic development","volume":"54","author":"CB Pumpuni","year":"1996","journal-title":"Am J Trop Med Hyg"},{"issue":"1","key":"ref33","doi-asserted-by":"crossref","first-page":"172","DOI":"10.1603\/0022-2585(2008)45[172:SRGSFB]2.0.CO;2","article-title":"16S rRNA Gene Sequences from Bacteria Associated with Adult Anopheles darlingi (Diptera: Culicidae) Mosquitoes","volume":"45","author":"O Terenius","year":"2008","journal-title":"J Med Entomol"},{"issue":"12","key":"ref34","doi-asserted-by":"crossref","first-page":"5211","DOI":"10.1099\/ijsem.0.001497","article-title":"<italic>Coetzeea brasiliensis<\/italic> gen. nov., sp. nov. isolated from larvae of <italic>Anopheles darlingi<\/italic>","volume":"66","author":"P K\u00e4mpfer","year":"2016","journal-title":"Int J Syst Evol Microbiol"},{"key":"ref35","doi-asserted-by":"crossref","first-page":"115","DOI":"10.1016\/j.mimet.2017.08.004","article-title":"A simple methodology to collect culturable bacteria from feces of Anopheles darlingi (Diptera: Culicidae)","volume":"141","author":"A Arruda","year":"2017","journal-title":"J Microbiol Methods"},{"issue":"1","key":"ref36","doi-asserted-by":"crossref","first-page":"148","DOI":"10.1186\/s40168-018-0528-y","article-title":"Factors shaping the gut bacterial community assembly in two main Colombian malaria vectors","volume":"6","author":"P Bascu\u00f1\u00e1n","year":"2018","journal-title":"Microbiome"},{"issue":"5","key":"ref37","doi-asserted-by":"crossref","first-page":"e1002742","DOI":"10.1371\/journal.ppat.1002742","article-title":"Midgut Microbiota of the Malaria Mosquito Vector Anopheles gambiae and Interactions with Plasmodium falciparum Infection","volume":"8","author":"A Boissi\u00e8re","year":"2012","journal-title":"PLoS Pathog"},{"key":"ref38","doi-asserted-by":"crossref","first-page":"715","DOI":"10.1016\/j.meegid.2014.09.029","article-title":"Composition of <italic>Anopheles coluzzii<\/italic> and <italic>Anopheles gambiae<\/italic> microbiota from larval to adult stages","volume":"28","author":"G Gimonneau","year":"2014","journal-title":"Infect Genet Evol"},{"issue":"22","key":"ref39","doi-asserted-by":"crossref","first-page":"5806","DOI":"10.1111\/mec.13877","article-title":"Mosquitoes host communities of bacteria that are essential for development but vary greatly between local habitats","volume":"25","author":"KL Coon","year":"2016","journal-title":"Mol Ecol"},{"issue":"6","key":"ref40","doi-asserted-by":"crossref","first-page":"e0157529","DOI":"10.1371\/journal.pone.0157529","article-title":"Seasonality and Locality Affect the Diversity of Anopheles gambiae and Anopheles coluzzii Midgut Microbiota from Ghana","volume":"11","author":"J Akorli","year":"2016","journal-title":"PLoS One"},{"issue":"3","key":"ref41","doi-asserted-by":"crossref","first-page":"e0194899","DOI":"10.1371\/journal.pone.0194899","article-title":"Investigation of the seasonal microbiome of Anopheles coluzzii mosquitoes in Mali","volume":"13","author":"BJ Krajacich","year":"2018","journal-title":"PLoS One"},{"issue":"20","key":"ref42","doi-asserted-by":"crossref","first-page":"5138","DOI":"10.1111\/j.1365-294X.2012.05759.x","article-title":"Deep sequencing reveals extensive variation in the gut microbiota of wild mosquitoes from Kenya","volume":"21","author":"J Osei-Poku","year":"2012","journal-title":"Mol Ecol"},{"issue":"2","key":"ref43","doi-asserted-by":"crossref","first-page":"e0005377","DOI":"10.1371\/journal.pntd.0005377","article-title":"Comparative analysis of gut microbiota of mosquito communities in central Illinois","volume":"11","author":"EJ Muturi","year":"2017","journal-title":"PLoS Negl Trop Dis"},{"key":"ref44","doi-asserted-by":"crossref","first-page":"47","DOI":"10.1186\/1756-3305-6-47","article-title":"Phylogeography of the neotropical <italic>Anopheles triannulatus<\/italic> complex (Diptera: Culicidae) supports deep structure and complex patterns","volume":"6","author":"M Moreno","year":"2013","journal-title":"Parasit Vectors"},{"key":"ref45","doi-asserted-by":"crossref","first-page":"927453","DOI":"10.5402\/2013\/927453","article-title":"Colombian Anopheles triannulatus (Diptera: Culicidae) Naturally Infected with Plasmodium spp","volume":"2013","author":"DA Rosero","year":"2013","journal-title":"ISRN parasitology"},{"issue":"6","key":"ref46","doi-asserted-by":"crossref","first-page":"617","DOI":"10.1590\/S0074-02762006000600007","article-title":"Incrimination of Anopheles (<italic>Nyssorhynchus<\/italic>) rangeli and An. (Nys.) oswaldoi as natural vectors of Plasmodium vivax in Southern Colombia","volume":"101","author":"ML Quinones","year":"2006","journal-title":"Mem Inst Oswaldo Cruz"},{"issue":"3","key":"ref47","first-page":"418","article-title":"Newly incriminated anopheline vectors of human malaria parasites in Junin Department, Peru","volume":"3","author":"J Hayes","year":"1987","journal-title":"J Am Mosq Control Assoc"},{"issue":"3","key":"ref48","doi-asserted-by":"crossref","first-page":"e0193591","DOI":"10.1371\/journal.pone.0193591","article-title":"Molecular taxonomy and evolutionary relationships in the Oswaldoi-Konderi complex (Anophelinae: <italic>Anopheles: Nyssorhynchus<\/italic>) from the Brazilian Amazon region","volume":"13","author":"JF Saraiva","year":"2018","journal-title":"PLoS One"},{"issue":"1","key":"ref49","doi-asserted-by":"crossref","first-page":"8082","DOI":"10.1038\/s41598-017-07818-0","article-title":"Micro-epidemiology and spatial heterogeneity of P. <italic>vivax<\/italic> parasitaemia in riverine communities of the Peruvian Amazon: A multilevel analysis","volume":"7","author":"G Carrasco-Escobar","year":"2017","journal-title":"Sci Rep"},{"key":"ref50","doi-asserted-by":"crossref","first-page":"178","DOI":"10.1186\/1475-2875-12-178","article-title":"Hyperendemic malaria transmission in areas of occupation-related travel in the Peruvian Amazon","volume":"12","author":"BS Parker","year":"2013","journal-title":"Malar J"},{"key":"ref51","unstructured":"MINSA. Ministerio de Salud del Per\u00fa: Sala de Situaci\u00f3n de Salud: Epidemiol\u00f3gica N\u00b0 52\u20132017. 2017."},{"issue":"3","key":"ref52","first-page":"454","article-title":"Marisa Narcisco. Physicochemical characterization of the white, black, and clearwater rivers of the Amazon Basin and its implications on the distribution of freshwater stingrays (Chondrichthyes, Potamotrygonidae)","volume":"5","author":"WPF Duncan","year":"2010","journal-title":"Pan-American Journal of Aquatic Sciences"},{"key":"ref53","first-page":"662","article-title":"Entomologia Medica","volume":"1","author":"OP Forattini","year":"1962"},{"key":"ref54","first-page":"1","article-title":"A handbook of the Amazonian species of Anopheles (<italic>Nyssorhynchus<\/italic>) (Diptera: Culicidae)","volume":"13","author":"ME Faran","year":"1981","journal-title":"Mosq Syst"},{"key":"ref55","first-page":"228","article-title":"Principais mosquitos de import\u00e2ncia sanit\u00e1ria no Brasil","author":"RA Consoli","year":"1994"},{"issue":"3","key":"ref56","doi-asserted-by":"crossref","first-page":"492","DOI":"10.4269\/ajtmh.2008.78.492","article-title":"Improved molecular technique for the differentiation of neotropical anopheline species","volume":"78","author":"R Matson","year":"2008","journal-title":"Am J Trop Med Hyg"},{"issue":"5","key":"ref57","first-page":"294","article-title":"DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates","volume":"3","author":"O Folmer","year":"1994","journal-title":"Mol Mar Biol Biotechnol"},{"issue":"41","key":"ref58","doi-asserted-by":"crossref","first-page":"14812","DOI":"10.1073\/pnas.0406166101","article-title":"Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly <italic>Astraptes fulgerator<\/italic>","volume":"101","author":"PD Hebert","year":"2004","journal-title":"Proc Natl Acad Sci U S A"},{"issue":"3","key":"ref59","doi-asserted-by":"crossref","first-page":"355","DOI":"10.1111\/j.1471-8286.2007.01678.x","article-title":"bold: The Barcode of Life Data System (<ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/www.barcodinglife.org\" xlink:type=\"simple\">http:\/\/www.barcodinglife.org<\/ext-link>)","volume":"7","author":"S Ratnasingham","year":"2007","journal-title":"Mol Ecol Notes"},{"issue":"12","key":"ref60","doi-asserted-by":"crossref","first-page":"1647","DOI":"10.1093\/bioinformatics\/bts199","article-title":"Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data","volume":"28","author":"M Kearse","year":"2012","journal-title":"Bioinformatics"},{"issue":"1","key":"ref61","doi-asserted-by":"crossref","first-page":"324","DOI":"10.1186\/1756-3305-6-324","article-title":"Systematics of the Oswaldoi Complex (<italic>Anopheles, Nyssorhynchus<\/italic>) in South America","volume":"6","author":"F Ruiz-Lopez","year":"2013","journal-title":"Parasites & Vectors"},{"issue":"5","key":"ref62","doi-asserted-by":"crossref","first-page":"1792","DOI":"10.1093\/nar\/gkh340","article-title":"MUSCLE: multiple sequence alignment with high accuracy and high throughput","volume":"32","author":"RC Edgar","year":"2004","journal-title":"Nucleic Acids Res"},{"issue":"7","key":"ref63","doi-asserted-by":"crossref","first-page":"1870","DOI":"10.1093\/molbev\/msw054","article-title":"MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets","volume":"33","author":"S Kumar","year":"2016","journal-title":"Mol Biol Evol"},{"issue":"4","key":"ref64","doi-asserted-by":"crossref","first-page":"431","DOI":"10.1093\/jhered\/esx033","article-title":"DAMBE6: New Tools for Microbial Genomics, Phylogenetics, and Molecular Evolution","volume":"108","author":"X Xia","year":"2017","journal-title":"J Hered"},{"issue":"9","key":"ref65","doi-asserted-by":"crossref","first-page":"1110","DOI":"10.1111\/2041-210X.12410","article-title":"popart: full\u2010feature software for haplotype network construction","volume":"6","author":"JW Leigh","year":"2015","journal-title":"Methods Ecol Evol"},{"issue":"5","key":"ref66","doi-asserted-by":"crossref","first-page":"893","DOI":"10.1016\/j.rse.2009.01.007","article-title":"Summary of current radiometric calibration coefficients for Landsat MSS, TM, ETM+, and EO-1 ALI sensors","volume":"113","author":"G Chander","year":"2009","journal-title":"Remote Sens Environ"},{"issue":"1","key":"ref67","doi-asserted-by":"crossref","first-page":"195","DOI":"10.1016\/S0034-4257(02)00096-2","article-title":"Overview of the radiometric and biophysical performance of the MODIS vegetation indices","volume":"83","author":"A Huete","year":"2002","journal-title":"Remote Sens Environ"},{"issue":"3","key":"ref68","doi-asserted-by":"crossref","first-page":"257","DOI":"10.1016\/S0034-4257(96)00067-3","article-title":"NDWI\u2014A normalized difference water index for remote sensing of vegetation liquid water from space","volume":"58","author":"B-c Gao","year":"1996","journal-title":"Remote Sens Environ"},{"issue":"6160","key":"ref69","doi-asserted-by":"crossref","first-page":"850","DOI":"10.1126\/science.1244693","article-title":"High-Resolution Global Maps of 21st-Century Forest Cover Change","volume":"342","author":"MC Hansen","year":"2013","journal-title":"Science"},{"issue":"3566","key":"ref70","first-page":"453","article-title":"Zooplankton Species Groups in the North Pacific","volume":"140","author":"EW Fager","year":"1963","journal-title":"Co-occurrences of species can be used to derive groups whose members react similarly to water-mass types"},{"issue":"12","key":"ref71","doi-asserted-by":"crossref","first-page":"e180380","DOI":"10.1590\/0074-02760180380","article-title":"<italic>Nyssorhynchus dunhami<\/italic>: bionomics and natural infection by <italic>Plasmodium falciparum<\/italic> and <italic>P<\/italic>. <italic>vivax<\/italic> in the Peruvian Amazon","volume":"113","author":"C Prussing","year":"2018","journal-title":"Mem Inst Oswaldo Cruz"},{"key":"ref72","article-title":"R: A language and environment for statistical computing","year":"2018"},{"key":"ref73","first-page":"9","article-title":"Classes and methods for spatial data in R","author":"EJ Pebesma","year":"2005","journal-title":"R News"},{"key":"ref74","unstructured":"Bivand R, Rundel C. rgeos: Interface to Geometry Engine\u2014Open Source (&apos;GEOS&apos;). R package version 0.3\u201328. 2018."},{"issue":"3","key":"ref75","first-page":"1","article-title":"mice: Multivariate Imputation by Chained Equations in R","volume":"45","author":"S van Buuren","year":"2011","journal-title":"Journal of Statistical Software"},{"key":"ref76","unstructured":"Grund S, Robitzsch A, Luedtke O. mitml: Tools for Multiple Imputation in Multilevel Modeling. R package version 0.3\u20135. 2017."},{"key":"ref77","unstructured":"Oksanen J, Blanchet FG, Friendly M, Kindt R, Legendre P, McGlinn D, et al. vegan: Community Ecology Package. R package version 2.5\u20134. 2019."},{"issue":"1","key":"ref78","first-page":"31","article-title":"missMDA: A Package for Handling Missing Values in Multivariate Data Analysis","volume":"70","author":"J Josse","year":"2016","journal-title":"missMDA: A Package for Handling Missing Values in Multivariate Data Analysis"},{"key":"ref79","unstructured":"Wang D. ggords: Ordination Visualization. R package version 1.0. 2017."},{"issue":"6","key":"ref80","doi-asserted-by":"crossref","first-page":"1216","DOI":"10.4269\/ajtmh.2006.75.1216","article-title":"Epidemiology and spatial analysis of malaria in the Northern Peruvian Amazon","volume":"75","author":"CT Bautista","year":"2006","journal-title":"Am J Trop Med Hyg"},{"key":"ref81","doi-asserted-by":"crossref","first-page":"110","DOI":"10.1016\/j.mimet.2015.10.010","article-title":"Microbial ecology-based methods to characterize the bacterial communities of non-model insects","volume":"119","author":"EM Prosdocimi","year":"2015","journal-title":"J Microbiol Methods"},{"issue":"1","key":"ref82","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1186\/s12915-014-0087-z","article-title":"Reagent and laboratory contamination can critically impact sequence-based microbiome analyses","volume":"12","author":"SJ Salter","year":"2014","journal-title":"BMC Biol"},{"key":"ref83","unstructured":"Illumina. 16S Metagenomic Sequencing Library Preparation Guide 2013. Available from: <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"https:\/\/support.illumina.com\/content\/dam\/illumina-support\/documents\/documentation\/chemistry_documentation\/16s\/16s-metagenomic-library-prep-guide-15044223-b.pdf\" xlink:type=\"simple\">https:\/\/support.illumina.com\/content\/dam\/illumina-support\/documents\/documentation\/chemistry_documentation\/16s\/16s-metagenomic-library-prep-guide-15044223-b.pdf<\/ext-link>."},{"issue":"5","key":"ref84","doi-asserted-by":"crossref","first-page":"335","DOI":"10.1038\/nmeth.f.303","article-title":"QIIME allows analysis of high-throughput community sequencing data","volume":"7","author":"JG Caporaso","year":"2010","journal-title":"Nat Meth"},{"issue":"19","key":"ref85","doi-asserted-by":"crossref","first-page":"2460","DOI":"10.1093\/bioinformatics\/btq461","article-title":"Search and clustering orders of magnitude faster than BLAST","volume":"26","author":"RC Edgar","year":"2010","journal-title":"Bioinformatics"},{"issue":"2","key":"ref86","doi-asserted-by":"crossref","first-page":"266","DOI":"10.1093\/bioinformatics\/btp636","article-title":"PyNAST: a flexible tool for aligning sequences to a template alignment","volume":"26","author":"JG Caporaso","year":"2010","journal-title":"Bioinformatics"},{"issue":"16","key":"ref87","doi-asserted-by":"crossref","first-page":"5261","DOI":"10.1128\/AEM.00062-07","article-title":"Na\u00efve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy","volume":"73","author":"Q Wang","year":"2007","journal-title":"Appl Environ Microbiol"},{"issue":"3","key":"ref88","doi-asserted-by":"crossref","first-page":"e9490","DOI":"10.1371\/journal.pone.0009490","article-title":"FastTree 2 \u2013Approximately Maximum-Likelihood Trees for Large Alignments","volume":"5","author":"MN Price","year":"2010","journal-title":"PLoS One"},{"issue":"D1","key":"ref89","doi-asserted-by":"crossref","first-page":"D590","DOI":"10.1093\/nar\/gks1219","article-title":"The SILVA ribosomal RNA gene database project: improved data processing and web-based tools","volume":"41","author":"C Quast","year":"2013","journal-title":"Nucleic Acids Res"},{"issue":"12","key":"ref90","doi-asserted-by":"crossref","first-page":"8228","DOI":"10.1128\/AEM.71.12.8228-8235.2005","article-title":"UniFrac: a New Phylogenetic Method for Comparing Microbial Communities","volume":"71","author":"C Lozupone","year":"2005","journal-title":"Appl Environ Microbiol"},{"key":"ref91","doi-asserted-by":"crossref","DOI":"10.1007\/978-0-387-98141-3","article-title":"ggplot2: elegant graphics for data analysis","author":"H Wickham","year":"2009"},{"key":"ref92","first-page":"27663","article-title":"Analysis of composition of microbiomes: a novel method for studying microbial composition","volume":"26","author":"S Mandal","year":"2015","journal-title":"Microb Ecol Health Dis"},{"issue":"3","key":"ref93","doi-asserted-by":"crossref","first-page":"345","DOI":"10.1093\/jmedent\/36.3.345","article-title":"<italic>Anopheles<\/italic> (<italic>Anopheles<\/italic>) <italic>forattinii<\/italic>: a new species in Series Arribalzagia (Diptera: Culicidae)","volume":"36","author":"RC Wilkerson","year":"1999","journal-title":"J Med Entomol"},{"issue":"1722","key":"ref94","doi-asserted-by":"crossref","DOI":"10.1098\/rstb.2016.0125","article-title":"Does deforestation promote or inhibit malaria transmission in the Amazon? A systematic literature review and critical appraisal of current evidence","volume":"372","author":"JM Tucker Lima","year":"2017","journal-title":"Philos Trans R Soc Lond B Biol Sci"},{"issue":"7","key":"ref95","doi-asserted-by":"crossref","first-page":"2452","DOI":"10.1073\/pnas.0510576103","article-title":"Malaria risk on the Amazon frontier","volume":"103","author":"MC de Castro","year":"2006","journal-title":"Proc Natl Acad Sci U S A"},{"issue":"1","key":"ref96","doi-asserted-by":"crossref","first-page":"7077","DOI":"10.1038\/s41598-018-25344-5","article-title":"Abundance of impacted forest patches less than 5 km2 is a key driver of the incidence of malaria in Amazonian Brazil","volume":"8","author":"LSM Chaves","year":"2018","journal-title":"Sci Rep"},{"issue":"9","key":"ref97","doi-asserted-by":"crossref","first-page":"e0137521","DOI":"10.1371\/journal.pone.0137521","article-title":"Epidemic and Endemic Malaria Transmission Related to Fish Farming Ponds in the Amazon Frontier","volume":"10","author":"IC dos Reis","year":"2015","journal-title":"PLoS One"},{"issue":"1","key":"ref98","doi-asserted-by":"crossref","first-page":"517","DOI":"10.1186\/s12936-015-1037-0","article-title":"Larval habitat characterization of Anopheles darlingi from its northernmost geographical distribution in Chiapas, Mexico","volume":"14","author":"C Villarreal-Trevi\u00f1o","year":"2015","journal-title":"Malar J"},{"issue":"2","key":"ref99","doi-asserted-by":"crossref","first-page":"221","DOI":"10.1590\/S0074-02761990000200014","article-title":"Observations on the distribution of anophelines in Suriname with particular reference to the malaria vector <italic>Anopheles darlingi<\/italic>","volume":"85","author":"JA Rozendaal","year":"1990","journal-title":"Mem Inst Oswaldo Cruz"},{"issue":"2","key":"ref100","first-page":"229","article-title":"Bacterial abundance in larval habitats of four species of Anopheles (Diptera: Culicidae) in Belize, Central America","volume":"25","author":"E Rejmankova","year":"2000","journal-title":"J Vector Ecol"},{"issue":"2","key":"ref101","first-page":"382","article-title":"Use of remote sensing and geographic information systems to predict locations of <italic>Anopheles darlingi<\/italic>-positive breeding sites within the Sibun River in Belize, Central America","volume":"43","author":"NL Achee","year":"2006","journal-title":"J Med Entomol"},{"issue":"2","key":"ref102","doi-asserted-by":"crossref","first-page":"176","DOI":"10.3376\/1081-1710(2007)32[176:HSFTSO]2.0.CO;2","article-title":"Habitat suitability for three species of Anopheles mosquitoes: larval growth and survival in reciprocal placement experiments","volume":"32","author":"JP Grieco","year":"2007","journal-title":"J Vector Ecol"},{"issue":"2","key":"ref103","doi-asserted-by":"crossref","first-page":"205","DOI":"10.1093\/jmedent\/33.2.205","article-title":"Characterization of Anopheles darlingi (Diptera: Culicidae) larval habitats in Belize, Central America","volume":"33","author":"S Manguin","year":"1996","journal-title":"J Med Entomol"},{"issue":"1","key":"ref104","doi-asserted-by":"crossref","first-page":"571","DOI":"10.1186\/s13071-017-2517-6","article-title":"Environmental variables associated with anopheline larvae distribution and abundance in Yanomami villages within unaltered areas of the Brazilian Amazon","volume":"10","author":"J S\u00e1nchez-Ribas","year":"2017","journal-title":"Parasites & Vectors"},{"issue":"1","key":"ref105","doi-asserted-by":"crossref","first-page":"159","DOI":"10.1111\/j.1948-7134.2011.00153.x","article-title":"Temporal and spatial distribution of malaria within an agricultural settlement of the Brazilian Amazon","volume":"36","author":"FS de Barros","year":"2011","journal-title":"J Vector Ecol"},{"issue":"5","key":"ref106","doi-asserted-by":"crossref","first-page":"309","DOI":"10.1590\/S0036-46652007000500007","article-title":"Affinity and diversity indices for anopheline immature forms","volume":"49","author":"L Nagm","year":"2007","journal-title":"Rev Inst Med Trop Sao Paulo"},{"issue":"5","key":"ref107","doi-asserted-by":"crossref","first-page":"605","DOI":"10.1590\/0074-0276108052013012","article-title":"Distinct population structure for co-occurring <italic>Anopheles goeldii<\/italic> and <italic>Anopheles triannulatus<\/italic> in Amazonian Brazil","volume":"108","author":"SN McKeon","year":"2013","journal-title":"Mem Inst Oswaldo Cruz"},{"issue":"5","key":"ref108","doi-asserted-by":"crossref","first-page":"336","DOI":"10.1590\/S0034-89101992000500007","article-title":"Populations of larvae of Anopheles spp. in natural breeding sites in western Venezuela, an area of refractory malaria","volume":"26","author":"E Rojas","year":"1992","journal-title":"Rev Saude Publica"},{"issue":"2","key":"ref109","first-page":"177","article-title":"Fluctuaciones estacionales y temporales de la densidad larvaria de Anopheles darlingi Root (Diptera: Culicidae) y familias de insectos asociados al h\u00e1bitat en El Granz\u00f3n, Parroquia San Isidro, municipio Sifontes del estado Bol\u00edvar, Venezuela","volume":"48","author":"J Berti-Moser","year":"2008","journal-title":"Bol Malariol Salud Ambient"},{"issue":"11","key":"ref110","doi-asserted-by":"crossref","first-page":"e2000225","DOI":"10.1371\/journal.pbio.2000225","article-title":"Phylosymbiosis: Relationships and Functional Effects of Microbial Communities across Host Evolutionary History","volume":"14","author":"AW Brooks","year":"2016","journal-title":"PLoS Biol"},{"issue":"9","key":"ref111","doi-asserted-by":"crossref","first-page":"e24767","DOI":"10.1371\/journal.pone.0024767","article-title":"Dynamic Gut Microbiome across Life History of the Malaria Mosquito Anopheles gambiae in Kenya","volume":"6","author":"Y Wang","year":"2011","journal-title":"PLoS One"},{"issue":"2","key":"ref112","first-page":"61","article-title":"Mosquito collections from a remote unstudied area of southeastern Bolivia","volume":"15","author":"EL Peyton","year":"1983","journal-title":"Mosquito Systematics"},{"issue":"6","key":"ref113","doi-asserted-by":"crossref","first-page":"1079","DOI":"10.4269\/ajtmh.12-0203","article-title":"Ecological suitability and spatial distribution of five <italic>Anopheles<\/italic> species in Amazonian Brazil","volume":"88","author":"SN McKeon","year":"2013","journal-title":"Am J Trop Med Hyg"},{"key":"ref114","doi-asserted-by":"crossref","first-page":"449","DOI":"10.1590\/S1519-566X2010000300022","article-title":"Occurrence of Anopheles (<italic>Nyssorhynchus<\/italic>) <italic>rangeli<\/italic> (Gabaldon et al) and <italic>Anopheles<\/italic> (<italic>Nyssorhynchus<\/italic>) evansae (Brethes) (Diptera: Culicidae) in an Eutrophized Dam","volume":"39","author":"ED Wermelinger","year":"2010","journal-title":"Neotropical Entomology"},{"issue":"3","key":"ref115","doi-asserted-by":"crossref","first-page":"353","DOI":"10.1590\/S0074-02761993000300003","article-title":"Spatial and temporal distribution of anopheline larvae in two malarious areas in Sucre State, Venezuela","volume":"88","author":"J Berti","year":"1993","journal-title":"Mem Inst Oswaldo Cruz"},{"issue":"2","key":"ref116","first-page":"130","article-title":"Larval habitats of anopheline mosquitoes in the Upper Orinoco, Venezuela","volume":"24","author":"E Rejmankova","year":"1999","journal-title":"J Vector Ecol"},{"issue":"1","key":"ref117","doi-asserted-by":"crossref","first-page":"476","DOI":"10.1186\/s12936-015-1002-y","article-title":"Larval habitat characteristics of the main malaria vectors in the most endemic regions of Colombia: potential implications for larval control","volume":"14","author":"M Conde","year":"2015","journal-title":"Malar J"},{"issue":"2","key":"ref118","doi-asserted-by":"crossref","first-page":"215","DOI":"10.1111\/jvec.12216","article-title":"Diversity of anopheline mosquitoes (Diptera: Culicidae) and classification based on the characteristics of the habitats where they were collected in Puerto Iguaz\u00fa, Misiones, Argentina","volume":"41","author":"PG Ramirez","year":"2016","journal-title":"J Vector Ecol"},{"issue":"1","key":"ref119","doi-asserted-by":"crossref","first-page":"124","DOI":"10.1111\/j.1948-7134.2012.00209.x","article-title":"Characterization of larval habitats of Anopheles albimanus, Anopheles pseudopunctipennis, <italic>Anopheles punctimacula<\/italic>, and <italic>Anopheles oswaldoi<\/italic> s.l. populations in lowland and highland Ecuador","volume":"37","author":"LL Pinault","year":"2012","journal-title":"J Vector Ecol"},{"issue":"1","key":"ref120","doi-asserted-by":"crossref","first-page":"e0007105","DOI":"10.1371\/journal.pntd.0007105","article-title":"High-accuracy detection of malaria vector larval habitats using drone-based multispectral imagery","volume":"13","author":"G Carrasco-Escobar","year":"2019","journal-title":"PLoS Negl Trop Dis"},{"key":"ref121","doi-asserted-by":"crossref","first-page":"2639","DOI":"10.1038\/ismej.2017.119","article-title":"Exact sequence variants should replace operational taxonomic units in marker-gene data analysis","volume":"11","author":"BJ Callahan","year":"2017","journal-title":"The Isme Journal"}],"updated-by":[{"DOI":"10.1371\/journal.pntd.0007412","type":"new_version","label":"New version","source":"publisher","updated":{"date-parts":[[2019,5,28]],"date-time":"2019-05-28T00:00:00Z","timestamp":1559001600000}}],"container-title":["PLOS Neglected Tropical Diseases"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pntd.0007412","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,9,16]],"date-time":"2023-09-16T16:15:57Z","timestamp":1694880957000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pntd.0007412"}},"subtitle":[],"editor":[{"given":"Hans-Peter","family":"Fuehrer","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2019,5,15]]},"references-count":121,"journal-issue":{"issue":"5","published-online":{"date-parts":[[2019,5,15]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pntd.0007412","relation":{"new_version":[{"id-type":"doi","id":"10.1371\/journal.pntd.0007412","asserted-by":"object"}]},"ISSN":["1935-2735"],"issn-type":[{"value":"1935-2735","type":"electronic"}],"subject":[],"published":{"date-parts":[[2019,5,15]]}}}