{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,8]],"date-time":"2026-10-08T01:30:00Z","timestamp":1791423000297,"version":"4.3.3"},"reference-count":66,"publisher":"Public Library of Science (PLoS)","issue":"4","license":[{"start":{"date-parts":[[2008,4,30]],"date-time":"2008-04-30T00:00:00Z","timestamp":1209513600000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["www.plosone.org"],"crossmark-restriction":false},"short-container-title":["PLoS ONE"],"DOI":"10.1371\/journal.pone.0002073","type":"journal-article","created":{"date-parts":[[2008,4,29]],"date-time":"2008-04-29T22:36:23Z","timestamp":1209508583000},"page":"e2073","update-policy":"https:\/\/doi.org\/10.1371\/journal.pone.corrections_policy","source":"Crossref","is-referenced-by-count":68,"title":["Cyanogenic Pseudomonads Influence Multitrophic Interactions in the Rhizosphere"],"prefix":"10.1371","volume":"3","author":[{"given":"Thimmaraju","family":"Rudrappa","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Robert E.","family":"Splaine","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Meredith L.","family":"Biedrzycki","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Harsh P.","family":"Bais","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"340","published-online":{"date-parts":[[2008,4,30]]},"reference":[{"key":"ref1","doi-asserted-by":"crossref","first-page":"6207","DOI":"10.1128\/JB.183.21.6207-6214.2001","article-title":"<italic>Pseudomonas aeruginosa<\/italic> PAO1 Kills <italic>Caenorhabditis elegans<\/italic> by cyanide poisoning.","volume":"183","author":"LA Gallagher","year":"2001","journal-title":"Journal of Bacteriology"},{"key":"ref2","doi-asserted-by":"crossref","first-page":"261","DOI":"10.1099\/00221287-108-2-261","article-title":"Cyanide production and degradation during growth of <italic>Chromobacterium violaceum.<\/italic>","volume":"108","author":"PB Rodgers","year":"1978","journal-title":"Journal of General Microbiology"},{"key":"ref3","first-page":"233","article-title":"The metabolism of hydrogen cyanide by bacteria.","author":"PA Castric","year":"1981"},{"key":"ref4","first-page":"349","article-title":"HCN production by microalgae.","author":"B Vennesland","year":"1981"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"73","DOI":"10.1016\/S0065-2911(08)60304-5","article-title":"Microbial cyanide metabolism.","volume":"27","author":"CJ Knowles","year":"1986","journal-title":"Advances in Microbial Physiology"},{"key":"ref6","doi-asserted-by":"crossref","first-page":"57","DOI":"10.1023\/A:1004326910584","article-title":"Potential of <italic>Rhizobium<\/italic> and <italic>Bradyrhizobium species<\/italic> as plant growth promoting rhizobacteria on non-legumes: effect on radishes (<italic>Raphanus sativus<\/italic> L.).","volume":"204","author":"H Antoun","year":"1998","journal-title":"Plant and Soil"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"826","DOI":"10.1128\/JB.130.2.826-831.1977","article-title":"Glycine metabolism by <italic>Pseudomonas aeruginosa<\/italic>: hydrogen cyanide biosynthesis.","volume":"130","author":"PA Castric","year":"1977","journal-title":"Journal of Bacteriology"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"745","DOI":"10.2134\/jeq2002.0745","article-title":"Sorption of iron-cyanide complexes on goethite in the presence of sulfate and desorption with phosphate and chloride.","volume":"31","author":"T Rennert","year":"2002","journal-title":"J Environ Qual"},{"key":"ref9","doi-asserted-by":"crossref","first-page":"539","DOI":"10.1128\/MMBR.60.3.539-574.1996","article-title":"Microbial pathogenesis in cystic fibrosis: mucoid <italic>Pseudomonas aeruginosa<\/italic> and <italic>Burkholderia cepacia.<\/italic>","volume":"60","author":"JR Govan","year":"1996","journal-title":"Microbiology Reviews"},{"key":"ref10","doi-asserted-by":"crossref","first-page":"3843","DOI":"10.1128\/JB.182.13.3843-3845.2000","article-title":"Positive correlation between virulence of <italic>Pseudomonas aeruginosa<\/italic> mutants in mice and insects.","volume":"182","author":"G Jander","year":"2000","journal-title":"Journal of Bacteriology"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"47","DOI":"10.1016\/S0092-8674(00)80958-7","article-title":"Molecular mechanisms of bacterial virulence elucidated using a <italic>Pseudomonas aeruginosa-Caenorhabditis elegans<\/italic> pathogenesis model.","volume":"96","author":"S Mahajan-Miklos","year":"1999","journal-title":"Cell"},{"key":"ref12","doi-asserted-by":"crossref","first-page":"1899","DOI":"10.1126\/science.7604262","article-title":"Common virulence factors for bacterial pathogenicity in plants and animals.","volume":"268","author":"LG Rahme","year":"1995","journal-title":"Science"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"15699","DOI":"10.1073\/pnas.242343999","article-title":"A simple alfalfa seedling infection model for <italic>Pseudomonas aeruginosa<\/italic> strains associated with cystic fibrosis shows AlgT (sigma-22) and RhlR contribute to pathogenesis.","volume":"99","author":"L Silo-Suh","year":"2002","journal-title":"Proceedings of the National Academy of Sciences, USA"},{"key":"ref14","article-title":"The nematode <italic>Caenorhabditis elegans<\/italic>","author":"WB Wood","year":"1988"},{"key":"ref15","doi-asserted-by":"crossref","first-page":"1051","DOI":"10.1016\/S1286-4579(00)01259-4","article-title":"Establishment of <italic>Pseudomonas aeruginosa<\/italic> infection: lessons from a versatile opportunist.","volume":"2","author":"JB Lyczak","year":"2000","journal-title":"Microbes and Infection"},{"key":"ref16","doi-asserted-by":"crossref","first-page":"2371","DOI":"10.1128\/IAI.67.5.2371-2376.1999","article-title":"<italic>Pseudomonas aeruginosa<\/italic> hemolytic phospholipase C suppresses neutrophil respiratory burst activity.","volume":"67","author":"LS Terada","year":"1999","journal-title":"Infection and Immunity"},{"key":"ref17","doi-asserted-by":"crossref","first-page":"209","DOI":"10.1111\/j.1574-6968.1993.tb05868.x","article-title":"Secondary metabolites from fluorescent pseudomonads.","volume":"10","author":"H Budzikiewicz","year":"1993","journal-title":"FEMS Microbiology Reviews"},{"key":"ref18","doi-asserted-by":"crossref","first-page":"1207","DOI":"10.1128\/IAI.67.3.1207-1212.1999","article-title":"The <italic>Pseudomonas aeruginosa<\/italic> secretory product pyocyanin inactivates protease inhibitor: implications for the pathogenesis of cystic fibrosis lung disease.","volume":"67","author":"BE Britigan","year":"1999","journal-title":"Infection and Immunity"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"85","DOI":"10.1111\/j.1574-6968.1999.tb08712.x","article-title":"The <italic>Pseudomonas aeruginosa algC<\/italic> gene product participates in rhamnolipid biosynthesis.","volume":"179","author":"C Olvera","year":"1999","journal-title":"FEMS Microbiology Letters"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"170","DOI":"10.1007\/s002039900127","article-title":"Mechanism, regulation, and ecological role of bacterial cyanide biosynthesis.","volume":"173","author":"C Blumer","year":"2000","journal-title":"Archives of Microbiology"},{"key":"ref21","doi-asserted-by":"crossref","first-page":"320","DOI":"10.1104\/pp.103.027888","article-title":"<italic>Pseudomonas aeruginosa<\/italic>-Plant root interactions. Pathogenicity, biofilm formation, and root exudation.","volume":"134","author":"TS Walker","year":"2004","journal-title":"Plant Physiology"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"324","DOI":"10.1007\/s00284-002-3857-8","article-title":"Characterization of a new <italic>Pseudomonas aeruginosa<\/italic> strain NJ-15 as a potential biocontrol agent.","volume":"46","author":"N Bano","year":"2003","journal-title":"Curr Microbiol"},{"key":"ref23","doi-asserted-by":"crossref","first-page":"1406","DOI":"10.1094\/MPMI-19-1406","article-title":"Redox-active pyocyanin secreted by <italic>Pseudomonas aeruginosa<\/italic> 7NSK2 triggers systemic resistance to <italic>Magnaporthe grisea<\/italic> but enhances Rhizoctonia solani susceptibility in rice.","volume":"19","author":"D De Vleesschauwer","year":"2006","journal-title":"Mol Plant Microbe Interact"},{"key":"ref24","first-page":"24","article-title":"Methods for the detection and quantitative determination of cyanide in plant materials.","volume":"21","author":"AM Brinker","year":"1989","journal-title":"Phytochemical Bulletin"},{"key":"ref25","doi-asserted-by":"crossref","first-page":"1826","DOI":"10.1126\/science.1062249","article-title":"Resistance to an herbivore through engineered glucoside synthesis.","volume":"293","author":"DB Tattersal","year":"2001","journal-title":"Science"},{"key":"ref26","first-page":"155","article-title":"Plasticity in cyanogenesis of <italic>Trifolium repens<\/italic> L. inducibility, fitness costs and variable expression.","volume":"4","author":"KJ Hayden","year":"2002","journal-title":"Evolutionary Ecology Research"},{"key":"ref27","doi-asserted-by":"crossref","first-page":"1445","DOI":"10.1007\/s10886-005-5791-2","article-title":"Plant cyanogenesis of <italic>Phaseolus lunatus<\/italic> and its relevance for herbivore-plant interaction: The importance of quantitative data.","volume":"31","author":"DJ Ballhorn","year":"2005","journal-title":"Journal of Chemical Ecology"},{"key":"ref28","doi-asserted-by":"crossref","first-page":"227","DOI":"10.1111\/j.1574-6941.1994.tb00246.x","article-title":"Chemotaxis of deleterious rhizobacteria to velvet leaf (<italic>Abutilon theophrasti<\/italic> Medik.) seeds and seedlings.","volume":"15","author":"MFT Begonia","year":"1994","journal-title":"FEMS Microbiology Ecology"},{"key":"ref29","doi-asserted-by":"crossref","first-page":"601","DOI":"10.1017\/S0890037X00040525","article-title":"Rhizobacteria as biocontrol agents of weeds.","volume":"10","author":"RJ Kremer","year":"1996","journal-title":"Weed Technology"},{"key":"ref30","doi-asserted-by":"crossref","first-page":"182","DOI":"10.1007\/s002840010284","article-title":"Cyanide production by rhizobacteria and potential for suppression of weed seedling growth.","volume":"43","author":"RJ Kremer","year":"2001","journal-title":"Current Microbiology"},{"key":"ref31","doi-asserted-by":"crossref","first-page":"232","DOI":"10.1007\/BF00709654","article-title":"Cyanide production by rhizobacteria as a possible mechanism of plant growth inhibition.","volume":"7","author":"S Alstr\u00f6m","year":"1989","journal-title":"Biology and Fertility of Soils"},{"key":"ref32","doi-asserted-by":"crossref","first-page":"111","DOI":"10.1016\/S0074-7696(07)56004-3","article-title":"Auxin-mediated lateral root formation in higher plants.","volume":"256","author":"H Fukaki","year":"2007","journal-title":"International Review of Cytology"},{"key":"ref33","doi-asserted-by":"crossref","first-page":"317","DOI":"10.1016\/j.pbi.2005.03.005","article-title":"Flavonoids as developmental regulators.","volume":"8","author":"LP Taylor","year":"2005","journal-title":"Current Opinion in Plant Biology"},{"key":"ref34","doi-asserted-by":"crossref","first-page":"740","DOI":"10.1038\/nature01387","article-title":"Auxin promotes <italic>Arabidopsis<\/italic> root growth by modulating gibberellin response.","volume":"421","author":"X Fu","year":"2003","journal-title":"Nature"},{"key":"ref35","doi-asserted-by":"crossref","first-page":"473","DOI":"10.1111\/j.1399-3054.1962.tb08052.x","article-title":"A revised medium for rapid growth and bioassay with tissue culture.","volume":"15","author":"T Murashige","year":"1962","journal-title":"Physiologia Plantarum"},{"key":"ref36","doi-asserted-by":"crossref","first-page":"360","DOI":"10.1111\/j.1472-765X.2004.01489.x","article-title":"Methods for assaying cyanide in bacterial culture supernatant.","volume":"38","author":"JEA Zlosnik","year":"2004","journal-title":"Letters in Applied Microbiology"},{"key":"ref37","doi-asserted-by":"crossref","first-page":"283","DOI":"10.1007\/s00425-007-0480-8","article-title":"A degradation product of the salicylic acid pathway triggers oxidative stress resulting in down-regulation of <italic>Bacillus subtilis<\/italic> biofilm formation on <italic>Arabidopsis thaliana<\/italic> roots.","volume":"226","author":"T Rudrappa","year":"2007","journal-title":"Planta"},{"key":"ref38","doi-asserted-by":"crossref","first-page":"e846","DOI":"10.1371\/journal.pone.0000846","article-title":"Host plant selectivity of rhizobacteria in a crop\/weed model system.","volume":"9","author":"SL Zeller","year":"2007","journal-title":"PLoS One"},{"key":"ref39","doi-asserted-by":"crossref","first-page":"307","DOI":"10.1104\/pp.103.028712","article-title":"Biocontrol of <italic>Bacillus subtilis<\/italic> against infection of <italic>Arabidopsis<\/italic> roots by <italic>Pseudomonas syringae<\/italic> is facilitated by biofilm formation and surfactin production.","volume":"134","author":"HP Bais","year":"2004","journal-title":"Plant Physiology"},{"key":"ref40","doi-asserted-by":"crossref","first-page":"847","DOI":"10.1111\/j.1365-2958.2004.04023.x","article-title":"Identification of <italic>AbrB<\/italic>-regulated genes involved in biofilm formation by <italic>Bacillus subtilis<\/italic>.","volume":"52","author":"MA Hamon","year":"2004","journal-title":"Molecular Microbiology"},{"key":"ref41","doi-asserted-by":"crossref","first-page":"11621","DOI":"10.1073\/pnas.191384198","article-title":"Fruiting body formation by <italic>Bacillus subtilis<\/italic>.","volume":"98","author":"SS Branda","year":"2001","journal-title":"Proceedings of the National Academy of Sciences, USA"},{"key":"ref42","doi-asserted-by":"crossref","first-page":"3970","DOI":"10.1128\/JB.186.12.3970-3979.2004","article-title":"Genes involved in formation of structured multicellular communities by <italic>Bacillus subtilis<\/italic>.","volume":"186","author":"SS Branda","year":"2004","journal-title":"Journal of Bacteriology"},{"key":"ref43","doi-asserted-by":"crossref","first-page":"1229","DOI":"10.1111\/j.1365-2958.2005.05020.x","article-title":"A major protein component of the <italic>Bacillus subtilis<\/italic> biofilm matrix.","volume":"59","author":"SS Branda","year":"2006","journal-title":"Molecular Microbiology"},{"key":"ref44","doi-asserted-by":"crossref","first-page":"1216","DOI":"10.1111\/j.1365-2958.2005.05019.x","article-title":"Targets of the master regulator of biofilm formation in <italic>Bacillus subtilis<\/italic>.","volume":"59","author":"F Chu","year":"2006","journal-title":"Molecular Microbiology"},{"key":"ref45","doi-asserted-by":"crossref","first-page":"739","DOI":"10.1111\/j.1365-2958.2004.04440.x","article-title":"A master regulator for biofilm formation by <italic>Bacillus subtilis<\/italic>.","volume":"55","author":"DB Kearns","year":"2005","journal-title":"Molecular Microbiology"},{"key":"ref46","doi-asserted-by":"crossref","first-page":"1802","DOI":"10.1128\/AEM.45.6.1802-1807.1983","article-title":"Cyanide production by <italic>Pseudomonas fluorescens<\/italic> and <italic>Pseudomonas aeruginosa<\/italic>.","volume":"45","author":"RA Askeland","year":"1983","journal-title":"Applied and Environmental Microbiology"},{"key":"ref47","doi-asserted-by":"crossref","first-page":"395","DOI":"10.1146\/annurev.mi.44.100190.002143","article-title":"Functions of secondary metabolites.","volume":"44","author":"LC Vining","year":"1990","journal-title":"Annual Review of Microbiology"},{"key":"ref48","doi-asserted-by":"crossref","first-page":"6940","DOI":"10.1128\/JB.182.24.6940-6949.2000","article-title":"Transcriptional control of the hydrogen cyanide biosynthetic genes <italic>hcnABC<\/italic> by the anerobic regulator ANR and the quorum sensing regulators <italic>LasR<\/italic> and <italic>RhlR<\/italic>.","volume":"182","author":"G Pessi","year":"2000","journal-title":"Journal of Bacteriology"},{"key":"ref49","doi-asserted-by":"crossref","first-page":"1865","DOI":"10.1126\/science.276.5320.1865","article-title":"ARF1, a transcription factor that binds to auxin response elements.","volume":"276","author":"T Ulmasov","year":"1997","journal-title":"Science"},{"key":"ref50","doi-asserted-by":"crossref","first-page":"463","DOI":"10.1016\/S0092-8674(00)81535-4","article-title":"An auxin-dependent distal organizer of pattern and polarity in the <italic>Arabidopsis<\/italic> root.","volume":"99","author":"S Sabatini","year":"1999","journal-title":"Cell"},{"key":"ref51","doi-asserted-by":"crossref","first-page":"843","DOI":"10.1105\/tpc.13.4.843","article-title":"Auxin transport promotes <italic>Arabidopsis<\/italic> lateral root initiation.","volume":"13","author":"I Casimiro","year":"2001","journal-title":"Plant Cell"},{"key":"ref52","doi-asserted-by":"crossref","first-page":"109","DOI":"10.1007\/s00344-003-0020-0","article-title":"Mediation of herbicide effects by hormone interactions.","volume":"22","author":"K Grossmann","year":"2004","journal-title":"Journal of Plant Growth Regulation"},{"key":"ref53","doi-asserted-by":"crossref","first-page":"183","DOI":"10.1007\/BF00029539","article-title":"The effects of the herbicide quinclorac on shoot growth in tomato is alleviated by inhibitors of ethylene biosynthesis and by the presence of an antisense construct to the 1-aminocyclopropane-1-carboxylic acid (ACC) synthase gene in transgenic plants.","volume":"16","author":"K Grossmann","year":"1995","journal-title":"Plant Growth Regulation"},{"key":"ref54","doi-asserted-by":"crossref","first-page":"432","DOI":"10.1016\/S0005-2728(00)00181-X","article-title":"The mitochondrial cyanide-resistant oxidase: structural conservation amid regulatory diversity.","volume":"15","author":"JN Siedow","year":"2000","journal-title":"Biochim Biophys Acta"},{"key":"ref55","doi-asserted-by":"crossref","first-page":"187","DOI":"10.1146\/annurev.arplant.56.032604.144246","article-title":"Redox regulation: a broadening horizon.","volume":"56","author":"BB Buchnan","year":"2005","journal-title":"Annual Review of Plant Biology"},{"key":"ref56","doi-asserted-by":"crossref","first-page":"135","DOI":"10.1016\/j.bbabio.2005.12.005","article-title":"Regulation of plant alternative oxidase activity: a tale of two cysteines.","volume":"1757","author":"AL Umbach","year":"2006","journal-title":"Biochimica Biophysica Acta"},{"key":"ref57","doi-asserted-by":"crossref","first-page":"546","DOI":"10.1016\/j.tplants.2003.09.015","article-title":"Beneficial interactions of mitochondrial metabolism with photosynthetic carbon assimilation.","volume":"8","author":"AS Raghavendra","year":"2003","journal-title":"Trends in Plant Science"},{"key":"ref58","first-page":"1948","article-title":"Effects of anaerobiosis on auxin-induced growth and ion transport.","volume":"34","author":"FR Caldogno","year":"1978","journal-title":"Cellular and Molecular Life Sciences (CMLS)"},{"key":"ref59","first-page":"360","article-title":"Effect of growth regulating substances on respiration.","author":"LJ Audus","year":"1960"},{"key":"ref60","doi-asserted-by":"crossref","first-page":"59","DOI":"10.1146\/annurev.pp.03.060152.000423","article-title":"Studies on physiology, pharmacology and biochemistry of auxin.","volume":"3","author":"J Bonner","year":"1952","journal-title":"Annual Review of Plant Physiology"},{"key":"ref61","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1007\/BF02266954","article-title":"Promotion of respiration by auxin in the induction of cell division in suspension cultures.","volume":"4","author":"LA Leonova","year":"1985","journal-title":"Journal Plant Growth Regulation"},{"key":"ref62","doi-asserted-by":"crossref","first-page":"17062","DOI":"10.1074\/jbc.271.29.17062","article-title":"Targeting the plant alternative oxidase protein to <italic>schizosaccharomyces pombe<\/italic> mitochondria confers cyanide-insensitive respiration.","volume":"29","author":"MS Albury","year":"1996","journal-title":"Journal of Biological Chemistry"},{"key":"ref63","first-page":"67","article-title":"Biocontrol of root diseases by <italic>Pseudomonas fluorescens<\/italic> CHA0: Current concepts and experimental approaches.","author":"C Voisard","year":"1994"},{"key":"ref64","doi-asserted-by":"crossref","first-page":"3187","DOI":"10.1128\/JB.180.12.3187-3196.1998","article-title":"Characterization of the <italic>hcnABC<\/italic> gene cluster encoding hydrogen cyanide synthase and anaerobic regulation by ANR in the strictly aerobic biocontrol agent <italic>Pseudomonas fluorescens<\/italic> CHA0.","volume":"180","author":"J Laville","year":"1998","journal-title":"Journal of Bacteriology"},{"key":"ref65","doi-asserted-by":"crossref","first-page":"5, e1","DOI":"10.4161\/psb.2.5.4117","article-title":"<italic>Arabidopsis thaliana<\/italic> root surface chemistry regulates in planta biofilm formation of <italic>Bacillus subtilis.<\/italic>","volume":"2","author":"T Rudrappa","year":"2007","journal-title":"Plant Signaling & Behavior"},{"key":"ref66","doi-asserted-by":"crossref","first-page":"4794","DOI":"10.1128\/AEM.69.8.4794-4805.2003","article-title":"CynD, the cyanide dihydratase from <italic>Bacillus pumilus<\/italic>: Gene cloning and structural studies.","volume":"69","author":"D Jandhyala","year":"2003","journal-title":"Applied and Environmental Microbiology"}],"container-title":["PLoS ONE"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pone.0002073","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,5,9]],"date-time":"2020-05-09T15:35:26Z","timestamp":1589038526000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pone.0002073"}},"subtitle":[],"editor":[{"given":"Hany A.","family":"El-Shemy","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2008,4,30]]},"references-count":66,"journal-issue":{"issue":"4","published-online":{"date-parts":[[2008,4,30]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pone.0002073","relation":{},"ISSN":["1932-6203"],"issn-type":[{"value":"1932-6203","type":"electronic"}],"subject":[],"published":{"date-parts":[[2008,4,30]]}}}