{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,5]],"date-time":"2026-10-05T22:02:50Z","timestamp":1791237770252,"version":"4.1.0"},"reference-count":36,"publisher":"Public Library of Science (PLoS)","issue":"10","license":[{"start":{"date-parts":[[2014,10,28]],"date-time":"2014-10-28T00:00:00Z","timestamp":1414454400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["www.plosone.org"],"crossmark-restriction":false},"short-container-title":["PLoS ONE"],"DOI":"10.1371\/journal.pone.0110885","type":"journal-article","created":{"date-parts":[[2014,10,28]],"date-time":"2014-10-28T18:00:06Z","timestamp":1414519206000},"page":"e110885","update-policy":"https:\/\/doi.org\/10.1371\/journal.pone.corrections_policy","source":"Crossref","is-referenced-by-count":36,"title":["CSF Proteomics of Secondary Phase Spinal Cord Injury in Human Subjects: Perturbed Molecular Pathways Post Injury"],"prefix":"10.1371","volume":"9","author":[{"given":"Mohor Biplab","family":"Sengupta","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mahashweta","family":"Basu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sourav","family":"Iswarari","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kiran Kumar","family":"Mukhopadhyay","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Krishna Pada","family":"Sardar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Biplab","family":"Acharyya","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pradeep K.","family":"Mohanty","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Debashis","family":"Mukhopadhyay","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"340","published-online":{"date-parts":[[2014,10,28]]},"reference":[{"key":"ref1","doi-asserted-by":"crossref","first-page":"456","DOI":"10.1017\/S0317167100014530","article-title":"Global Incidence and Prevalence of Traumatic Spinal Cord Injury","volume":"40","author":"JC Furlan","year":"2013","journal-title":"Can J Neurol Sci"},{"key":"ref2","doi-asserted-by":"crossref","first-page":"113","DOI":"10.1159\/000110368","article-title":"Prevalence and pattern of major neurological disorders in rural Kashmir (India) in 1986","volume":"13","author":"S Razdan","year":"1994","journal-title":"Neuroepidemiology"},{"key":"ref3","doi-asserted-by":"crossref","first-page":"281","DOI":"10.55782\/ane-2011-1848","article-title":"Secondary injury mechanisms in traumatic spinal cord injury: a nugget of this multiply cascade","volume":"71","author":"CA Oyinbo","year":"2011","journal-title":"Acta Neurobiol Exp (Wars)"},{"key":"ref4","doi-asserted-by":"crossref","first-page":"417","DOI":"10.1016\/S0140-6736(02)07603-1","article-title":"Spinal-cord injury","volume":"359","author":"JW McDonald","year":"2002","journal-title":"Lancet"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"14","DOI":"10.1310\/0DD8-26DW-PEXY-E8X5","article-title":"Apoptosis and secondary damage after experimental spinal cord injury","volume":"6","author":"MS Beattie","year":"2000","journal-title":"Top Spinal Cord Inj Rehabil"},{"key":"ref6","doi-asserted-by":"crossref","first-page":"225","DOI":"10.1002\/glia.10315","article-title":"Myelin-, reactive glia-, and scar-derived CNS axon growth inhibitors: expression, receptor signalling, and correlation with axon regeneration","volume":"46","author":"A Sandvig","year":"2004","journal-title":"Glia"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"799","DOI":"10.1038\/nrn2936","article-title":"Functions of Nogo proteins and their receptors in the nervous system","volume":"11","author":"ME Schwab","year":"2010","journal-title":"Nat Rev Neurosci"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/nrn1195","article-title":"Myelin-associated inhibitors of axonal regeneration in the adult mammalian CNS","volume":"4","author":"MT Filbin","year":"2003","journal-title":"Nat Rev Neurosci"},{"key":"ref9","doi-asserted-by":"crossref","first-page":"617","DOI":"10.1038\/nrn1956","article-title":"Glial inhibition of CNS axon regeneration","volume":"7","author":"G Yiu","year":"2006","journal-title":"Nat Rev Neurosci"},{"key":"ref10","doi-asserted-by":"crossref","first-page":"266","DOI":"10.1038\/sj.sc.3100432","article-title":"International standards for neurological and functional classification of spinal cord injury","volume":"35","author":"FM Maynard Jr","year":"1997","journal-title":"Spinal Cord"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"669","DOI":"10.1089\/neu.2009.1080","article-title":"Cerebrospinal fluid inflammatory cytokines and biomarkers of injury severity in acute human spinal cord injury","volume":"27","author":"BK Kwon","year":"2010","journal-title":"J Neurotrauma"},{"key":"ref12","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1742-2094-9-122","article-title":"Multiplex array proteomics detects increased MMP-8 in CSF after spinal cord injury","volume":"9","author":"M Light","year":"2012","journal-title":"J Neuroinflammation"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1371\/journal.pone.0019247","article-title":"Biomarkers for severity of spinal cord injury in the cerebrospinal fluid of rats","volume":"6","author":"JM Lubieniecka","year":"2011","journal-title":"PLoS One"},{"key":"ref14","doi-asserted-by":"crossref","first-page":"208","DOI":"10.1016\/j.gpb.2012.07.002","article-title":"Novel adaptors of Amyloid Precursor Protein intracellular domain and their functional implications","volume":"10","author":"A Chakrabarti","year":"2012","journal-title":"Genomics Proteomics Bioinformatics"},{"key":"ref15","doi-asserted-by":"crossref","first-page":"12123","DOI":"10.1073\/pnas.2032324100","article-title":"Protein complexes and functional modules in molecular networks","volume":"100","author":"V Spirin","year":"2003","journal-title":"Proc Natl Acad Sci USA"},{"key":"ref16","doi-asserted-by":"crossref","first-page":"75","DOI":"10.1016\/j.physrep.2009.11.002","article-title":"Community detection in graphs","volume":"486","author":"S Fortunato","year":"2010","journal-title":"Phys Rep"},{"key":"ref17","doi-asserted-by":"crossref","first-page":"066111","DOI":"10.1103\/PhysRevE.70.066111","article-title":"Finding community structure in very large networks","volume":"2)","author":"A Clauset","year":"2004","journal-title":"Phys Rev E Stat Nonlin Soft Matter Phys 70 (6 Pt"},{"key":"ref18","doi-asserted-by":"crossref","first-page":"8577","DOI":"10.1073\/pnas.0601602103","article-title":"Modularity and community structure in networks","volume":"103","author":"MEJ Newman","year":"2006","journal-title":"Proc Acad Sci USA"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1093\/nar\/gkn923","article-title":"Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists","volume":"37","author":"W Huang da","year":"2009","journal-title":"Nucleic Acids Res"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"W478","DOI":"10.1093\/nar\/gks402","article-title":"GeneCodis3: a non-redundant and modular enrichment analysis tool for functional genomics","volume":"40","author":"D Tabas-Madrid","year":"2012","journal-title":"Nucleic Acids Res"},{"key":"ref21","doi-asserted-by":"crossref","first-page":"2498","DOI":"10.1101\/gr.1239303","article-title":"Cytoscape: a software environment for integrated models of biomolecular interaction networks","volume":"13","author":"P Shannon","year":"2003","journal-title":"Genome Res"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"133","DOI":"10.1016\/S0304-3940(02)00375-0","article-title":"Analysis of gene expression following spinal cord injury in rat using complementary DNA microarray","volume":"327","author":"T Tachibana","year":"2002","journal-title":"Neurosci Lett"},{"key":"ref23","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1016\/j.jocn.2003.05.008","article-title":"Plasticity of gene expression in injured human dorsal root ganglia revealed by GeneChip oligonucleotide microarrays","volume":"11","author":"D Rabert","year":"2004","journal-title":"J Clin Neurosci"},{"key":"ref24","doi-asserted-by":"crossref","first-page":"89","DOI":"10.1016\/j.brainres.2013.08.022","article-title":"Spinal cord injury induced changes of nuclear receptors PPAR\u03b1 and LXR\u03b1 and modulation with oleic acid\/albumin treatment","volume":"1535","author":"D Fandela","year":"2013","journal-title":"Brain Res"},{"key":"ref25","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1742-2094-9-81","article-title":"Anti-inflammatory effect of simvastatin in an experimental model of spinal cord trauma: involvement of PPAR-a","volume":"9","author":"E Esposito","year":"2012","journal-title":"J Neuroinflammation"},{"key":"ref26","doi-asserted-by":"crossref","first-page":"13956","DOI":"10.1523\/JNEUROSCI.1925-12.2012","article-title":"p53 Regulates the Neuronal Intrinsic and Extrinsic Responses Affecting the Recovery of Motor Function following Spinal Cord Injury","volume":"32","author":"EM Floriddia","year":"2012","journal-title":"J Neurosci"},{"key":"ref27","doi-asserted-by":"crossref","first-page":"175","DOI":"10.1016\/j.neuint.2012.04.020","article-title":"In vitro beneficial activation of microglial cells by mechanically-injured astrocytes enhances the synthesis and secretion of BDNF through p38MAPK","volume":"61","author":"H Yang","year":"2012","journal-title":"Neurochem Int"},{"key":"ref28","doi-asserted-by":"crossref","first-page":"298","DOI":"10.1054\/jocn.2001.0969","article-title":"Patterns of immunocytochemical staining for ferritin and transferrin in the human spinal cord following traumatic injury","volume":"9","author":"B Koszyca","year":"2002","journal-title":"J Clin Neurosci"},{"key":"ref29","doi-asserted-by":"crossref","first-page":"796","DOI":"10.1111\/bph.12301","article-title":"Treatment with resveratrol attenuates sublesional bone loss in spinal cord-injured rats","volume":"170","author":"HD Wang","year":"2013","journal-title":"Br J Pharmacol"},{"key":"ref30","doi-asserted-by":"crossref","first-page":"81","DOI":"10.1096\/fj.11-192914","article-title":"Retinoid receptors trigger neuritogenesis in retinal degenerations","volume":"26","author":"Y Lin","year":"2012","journal-title":"FASEB J"},{"key":"ref31","first-page":"6415","article-title":"Retinoic acid receptor gamma (Rarg) and nuclear receptor subfamily 5, group A, member 2 (Nr5a2) promote conversion of fibroblasts to functional neurons. J. Biol","volume":"289","author":"Z Shi","year":"2014","journal-title":"Chem"},{"key":"ref32","doi-asserted-by":"crossref","first-page":"1015","DOI":"10.1172\/JCI113943","article-title":"A Role for Apolipoprotein E, Apolipoprotein A-I, and Low Density Lipoprotein Receptors in Cholesterol Transport during Regeneration and Remyelination of the Rat Sciatic Nerve. J. Clin","volume":"83","author":"JK Boyles","year":"1989","journal-title":"Invest"},{"key":"ref33","doi-asserted-by":"crossref","first-page":"160","DOI":"10.1016\/j.clinbiochem.2012.10.028","article-title":"Enhanced expression and fucosylation of ficolin3 in plasma of RA patients","volume":"46","author":"S Roy","year":"2013","journal-title":"Clin Biochem"},{"key":"ref34","doi-asserted-by":"crossref","first-page":"39","DOI":"10.1016\/S1015-9584(09)60242-6","article-title":"How Useful is Glucose Detection in Diagnosing Cerebrospinal Fluid Leak? The Rational Use of CT and Beta-2 Transferrin Assay in Detection of Cerebrospinal Fluid Fistula","volume":"27","author":"DTM Chan","year":"2004","journal-title":"Asian J Surg"},{"key":"ref35","doi-asserted-by":"crossref","first-page":"149","DOI":"10.2119\/molmed.2011.00183","article-title":"The Interaction of ApoA-I and ABCA1 Triggers Signal Transduction Pathways to Mediate Efflux of Cellular Lipids","volume":"18","author":"GJ Zhao","year":"2012","journal-title":"Mol Med"},{"key":"ref36","doi-asserted-by":"crossref","first-page":"1831","DOI":"10.1089\/neu.2004.21.1831","article-title":"Activation of complement pathways after contusion-induced spinal cord injury","volume":"21","author":"AJ Anderson","year":"2004","journal-title":"J Neurotrauma"}],"container-title":["PLoS ONE"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pone.0110885","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,6,4]],"date-time":"2024-06-04T12:56:10Z","timestamp":1717505770000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pone.0110885"}},"subtitle":[],"editor":[{"given":"Naren L.","family":"Banik","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2014,10,28]]},"references-count":36,"journal-issue":{"issue":"10","published-online":{"date-parts":[[2014,10,28]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pone.0110885","relation":{},"ISSN":["1932-6203"],"issn-type":[{"value":"1932-6203","type":"electronic"}],"subject":[],"published":{"date-parts":[[2014,10,28]]}}}