{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,8,4]],"date-time":"2024-08-04T09:14:12Z","timestamp":1722762852043},"reference-count":31,"publisher":"Public Library of Science (PLoS)","issue":"11","license":[{"start":{"date-parts":[[2014,11,12]],"date-time":"2014-11-12T00:00:00Z","timestamp":1415750400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["www.plosone.org"],"crossmark-restriction":false},"short-container-title":["PLoS ONE"],"DOI":"10.1371\/journal.pone.0112853","type":"journal-article","created":{"date-parts":[[2014,11,12]],"date-time":"2014-11-12T19:18:59Z","timestamp":1415819939000},"page":"e112853","update-policy":"http:\/\/dx.doi.org\/10.1371\/journal.pone.corrections_policy","source":"Crossref","is-referenced-by-count":4,"title":["High-Frequency Rugose Exopolysaccharide Production by Vibrio cholerae Strains Isolated in Haiti"],"prefix":"10.1371","volume":"9","author":[{"given":"Mustafizur","family":"Rahman","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mohammad","family":"Jubair","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Meer T.","family":"Alam","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Thomas A.","family":"Weppelmann","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Taj","family":"Azarian","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Marco","family":"Salemi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ilya A.","family":"Sakharuk","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mohammed H.","family":"Rashid","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Judith A.","family":"Johnson","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mahmuda","family":"Yasmin","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"J. Glenn","family":"Morris","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Afsar","family":"Ali","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"340","published-online":{"date-parts":[[2014,11,12]]},"reference":[{"key":"ref1","first-page":"2099","article-title":"Cholera - Modern pandemic disease of ancient lineage","volume":"17","author":"JG Morris Jr","year":"2011","journal-title":"Emerg Infect Dis"},{"key":"ref2","doi-asserted-by":"crossref","first-page":"1301","DOI":"10.1128\/MMBR.62.4.1301-1314.1998","article-title":"Epidemiology, genetics, and ecology of toxigenic <italic>Vibrio cholerae<\/italic>","volume":"62","author":"SM Faruque","year":"1998","journal-title":"Microbiology and Molecular Biology Reviews"},{"key":"ref3","doi-asserted-by":"crossref","first-page":"48","DOI":"10.1128\/CMR.8.1.48","article-title":"Cholera","volume":"8","author":"JB Kaper","year":"1995","journal-title":"Clinical Microbiology Reviews"},{"key":"ref4","doi-asserted-by":"crossref","unstructured":"Colwell RR, Huq A (1994) Vibrios in the environment: viable but nonculturable <italic>Vibrio cholerae<\/italic>. In: Wachsmuth IK, Blake PA, Olsvik \u00d8, editors. <italic>Vibrio cholerae<\/italic> and cholera: molecular to global perspectives. Washington: American Society for Microbiology.","DOI":"10.1128\/9781555818364.ch9"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"817","DOI":"10.1038\/nbt0985-817","article-title":"Viable, but non-culturable <italic>Vibrio cholerae<\/italic> and related pathogens in the environment: implications for release of genetically engineered microorganisms","volume":"3","author":"RR Colwell","year":"1985","journal-title":"Bio\/Technology"},{"key":"ref6","doi-asserted-by":"crossref","first-page":"e45187","DOI":"10.1371\/journal.pone.0045187","article-title":"Survival of <italic>Vibrio cholerae<\/italic> in nutrient-poor environments is associated with a novel &quot;persister&quot; phenotype","volume":"7","author":"M Jubair","year":"2012","journal-title":"PloS ONE"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"4028","DOI":"10.1073\/pnas.96.7.4028","article-title":"<italic>Vibrio cholerae<\/italic> O1 El Tor: identification of a gene cluster required for the rugose colony type, exopolysaccharide production, chlorine resistance, and biofilm formation","volume":"96","author":"FH Yildiz","year":"1999","journal-title":"Proc Natl Acad Sci USA"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"5773","DOI":"10.1128\/AEM.68.11.5773-5778.2002","article-title":"High-Frequency Rugose Exopolysaccharide Production by <italic>Vibrio cholerae<\/italic>","volume":"68","author":"A Ali","year":"2002","journal-title":"Appl Environ Microbiol"},{"key":"ref9","doi-asserted-by":"crossref","first-page":"3648","DOI":"10.1128\/AEM.64.10.3648-3655.1998","article-title":"<italic>Vibrio cholerae<\/italic> O1 strain TSI-4 produces the exopolysaccharide materials that determine colony morphology, stress resistance, and biofilm formation","volume":"64","author":"SN Wai","year":"1998","journal-title":"Applied and Environmental Microbiology"},{"key":"ref10","doi-asserted-by":"crossref","first-page":"3492","DOI":"10.1128\/JB.00119-09","article-title":"<italic>Pseudomonas aeruginosa<\/italic> Rugose Small-Colony Variants Have Adaptations That Likely Promote Persistence in the Cystic Fibrosis Lung","volume":"191","author":"M Starkey","year":"2009","journal-title":"Journal of Bacteriology"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"125","DOI":"10.1111\/j.1574-6976.2002.tb00605.x","article-title":"<italic>Vibrio cholerae<\/italic> and cholera: out of the water and into the host","volume":"26","author":"J Reidl","year":"2002","journal-title":"FEMS Microbiol Rev"},{"key":"ref12","doi-asserted-by":"crossref","first-page":"893","DOI":"10.1111\/j.1574-6976.2011.00322.x","article-title":"Pseudomonas biofilm matrix composition and niche biology","volume":"36","author":"EE Mann","year":"2012","journal-title":"FEMS Microbiol Rev"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"3296","DOI":"10.1128\/JCM.40.9.3296-3299.2002","article-title":"New Variants of <italic>Vibrio cholerae<\/italic> O1 Biotype El Tor with Attributes of the Classical Biotype from Hospitalized Patients with Acute Diarrhea in Bangladesh","volume":"40","author":"GB Nair","year":"2002","journal-title":"Journal of Clinical Microbiology"},{"key":"ref14","first-page":"987","article-title":"<italic>Vibrio cholerae<\/italic> O1 hybrid El Tor strains, Asia and Africa: Emerg Infect Dis","volume":"14(6)","author":"A Safa","year":"2008","journal-title":"Jun"},{"key":"ref15","first-page":"356","article-title":"Monitoring water sources for environmental reservoirs of toxigenic <italic>Vibrio cholerae<\/italic> O1, Haiti","volume":"20","author":"MT Alam","year":"2014","journal-title":"Emerg Infect Dis"},{"key":"ref16","doi-asserted-by":"crossref","first-page":"699","DOI":"10.3201\/eid1704.101973","article-title":"Recent clonal origin of cholera in Haiti","volume":"17","author":"A Ali","year":"2011","journal-title":"Emerg Infect dis"},{"key":"ref17","doi-asserted-by":"crossref","first-page":"2757","DOI":"10.1099\/mic.0.040196-0","article-title":"Role of Vibrio polysaccharide (vps) genes in VPS production, biofilm formation and Vibrio cholerae pathogenesis","volume":"156","author":"JC Fong","year":"2010","journal-title":"Microbiology"},{"key":"ref18","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0092883","article-title":"<italic>Vibrio cholerae<\/italic> persisted in microcosm for 700 days inhibits motility but promotes biofilm formation in nutrient-poor lake water microcosms","volume":"9","author":"M Jubair","year":"2014","journal-title":"PloS ONE"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"1967","DOI":"10.1128\/IAI.68.4.1967-1974.2000","article-title":"Mutations in the extracellular protein secretion pathway genes (<italic>eps<\/italic>) interfere with rugose polysaccharide production in and motility of <italic>Vibrio cholerae<\/italic>","volume":"68","author":"A Ali","year":"2000","journal-title":"Infect Immun"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"586","DOI":"10.1046\/j.1365-2958.1999.01624.x","article-title":"Steps in the development of a <italic>Vibrio cholerae<\/italic> El Tor biofilm","volume":"34","author":"PI Watnick","year":"1999","journal-title":"Mol Microbiol"},{"key":"ref21","doi-asserted-by":"crossref","first-page":"200","DOI":"10.1111\/j.1462-2920.2005.00880.x","article-title":"daime, a novel image analysis program for microbial ecology and biofilm research","volume":"8","author":"H Daims","year":"2006","journal-title":"Environ Microbiol"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"395","DOI":"10.1016\/j.mimet.2004.08.003","article-title":"Three-dimensional biofilm structure quantification","volume":"59","author":"H Beyenal","year":"2004","journal-title":"Journal of microbiological methods"},{"key":"ref23","doi-asserted-by":"crossref","first-page":"2731","DOI":"10.1093\/molbev\/msr121","article-title":"MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods","volume":"28","author":"K Tamura","year":"2011","journal-title":"Mol Biol Evol"},{"key":"ref24","doi-asserted-by":"crossref","first-page":"00157","DOI":"10.1128\/mBio.00157-11","article-title":"Population genetics of <italic>Vibrio cholerae<\/italic> from Nepal in 2010: evidence on the origin of the Haitian outbreak","volume":"2","author":"RS Hendriksen","year":"2011","journal-title":"MBio"},{"key":"ref25","doi-asserted-by":"crossref","first-page":"676","DOI":"10.1093\/bioinformatics\/bti079","article-title":"HyPhy: hypothesis testing using phylogenies","volume":"21","author":"SL Pond","year":"2005","journal-title":"Bioinformatics"},{"key":"ref26","doi-asserted-by":"crossref","first-page":"109","DOI":"10.1016\/j.tim.2008.12.004","article-title":"Vibrio biofilms: so much the same yet so different","volume":"17","author":"FH Yildiz","year":"2009","journal-title":"Trends Microbiol"},{"key":"ref27","doi-asserted-by":"crossref","first-page":"2519","DOI":"10.1128\/JB.187.7.2519-2525.2005","article-title":"High-frequency phase variation of <italic>Vibrio vulnificus<\/italic> 1003: isolation and characterization of a rugose phenotypic variant","volume":"187","author":"BL Grau","year":"2005","journal-title":"J Bacteriol"},{"key":"ref28","doi-asserted-by":"crossref","first-page":"4048","DOI":"10.1128\/AEM.67.9.4048-4056.2001","article-title":"<italic>Salmonella enterica<\/italic> serovar Typhimurium DT104 displays a rugose phenotype","volume":"67","author":"YA Anriany","year":"2001","journal-title":"Appl Environ Microbiol"},{"key":"ref29","doi-asserted-by":"crossref","first-page":"784","DOI":"10.1038\/nbt1183-784","article-title":"A broad host range mobilization system for <italic>in vivo<\/italic> genetic engineering:transposon mutagenesis in Gram negative bacteria","volume":"1","author":"R Simon","year":"1983","journal-title":"Biotechnology"},{"key":"ref30","doi-asserted-by":"crossref","first-page":"195","DOI":"10.1016\/0378-1119(91)90366-J","article-title":"Construction of versatile low-copy-number vectors for cloning, sequencing and gene expression in <italic>Escherichia coli<\/italic>","volume":"100","author":"RF Wang","year":"1999","journal-title":"Gene"},{"key":"ref31","doi-asserted-by":"crossref","first-page":"1418","DOI":"10.1172\/JCI116718","article-title":"The role of the <italic>eae<\/italic> gene of enterohemorrhagic <italic>Escherichia coli<\/italic> in intimate attachment in vitro and in a porcine model","volume":"92","author":"MS Donnenberg","year":"1993","journal-title":"The Journal of Clinical Investigation"}],"container-title":["PLoS ONE"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pone.0112853","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,8,26]],"date-time":"2020-08-26T18:31:09Z","timestamp":1598466669000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pone.0112853"}},"subtitle":[],"editor":[{"given":"Adam","family":"Driks","sequence":"first","affiliation":[],"role":[{"role":"editor","vocabulary":"crossref"}]}],"short-title":[],"issued":{"date-parts":[[2014,11,12]]},"references-count":31,"journal-issue":{"issue":"11","published-online":{"date-parts":[[2014,11,12]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pone.0112853","relation":{},"ISSN":["1932-6203"],"issn-type":[{"value":"1932-6203","type":"electronic"}],"subject":[],"published":{"date-parts":[[2014,11,12]]}}}