{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,20]],"date-time":"2026-08-20T16:14:12Z","timestamp":1787242452761,"version":"build-2736575974"},"reference-count":44,"publisher":"Public Library of Science (PLoS)","issue":"6","license":[{"start":{"date-parts":[[2017,6,8]],"date-time":"2017-06-08T00:00:00Z","timestamp":1496880000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001807","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","doi-asserted-by":"publisher","award":["05\/57500-9"],"award-info":[{"award-number":["05\/57500-9"]}],"id":[{"id":"10.13039\/501100001807","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001807","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","doi-asserted-by":"publisher","award":["11\/18204-6"],"award-info":[{"award-number":["11\/18204-6"]}],"id":[{"id":"10.13039\/501100001807","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001807","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","doi-asserted-by":"publisher","award":["14\/11523-7"],"award-info":[{"award-number":["14\/11523-7"]}],"id":[{"id":"10.13039\/501100001807","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["www.plosone.org"],"crossmark-restriction":false},"short-container-title":["PLoS ONE"],"DOI":"10.1371\/journal.pone.0178970","type":"journal-article","created":{"date-parts":[[2017,6,8]],"date-time":"2017-06-08T13:46:46Z","timestamp":1496929606000},"page":"e0178970","update-policy":"https:\/\/doi.org\/10.1371\/journal.pone.corrections_policy","source":"Crossref","is-referenced-by-count":48,"title":["Pandemic extra-intestinal pathogenic Escherichia coli (ExPEC) clonal group O6-B2-ST73 as a cause of avian colibacillosis in Brazil"],"prefix":"10.1371","volume":"12","author":[{"given":"Marcos Paulo Vieira","family":"Cunha","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andre Becker","family":"Saidenberg","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrea Micke","family":"Moreno","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Antonio Jos\u00e9 Piantino","family":"Ferreira","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"M\u00f4nica Aparecida Midolli","family":"Vieira","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"T\u00e2nia Aparecida Tardelli","family":"Gomes","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7107-5710","authenticated-orcid":true,"given":"Terezinha","family":"Kn\u00f6bl","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"340","published-online":{"date-parts":[[2017,6,8]]},"reference":[{"issue":"5","key":"ref1","doi-asserted-by":"crossref","first-page":"380","DOI":"10.1111\/1469-0691.12646","article-title":"Pandemic lineages of extraintestinal pathogenic <italic>Escherichia coli<\/italic>","volume":"20","author":"LW Riley","year":"2014","journal-title":"Clin Microbiol Infect"},{"issue":"11","key":"ref2","doi-asserted-by":"crossref","first-page":"916","DOI":"10.1089\/fpd.2013.1533","article-title":"Human and avian extraintestinal pathogenic <italic>Escherichia coli<\/italic>: infections, zoonotic risks, and antibiotic resistance trends","volume":"10","author":"M Mellata","year":"2013","journal-title":"Foodborne Pathog Dis"},{"issue":"2","key":"ref3","doi-asserted-by":"crossref","first-page":"122","DOI":"10.1016\/j.cmi.2015.11.010","article-title":"<italic>Escherichia coli<\/italic> and urinary tract infections: the role of poultry-meat","volume":"22","author":"AR Manges","year":"2016","journal-title":"Clin Microbiol Infect"},{"issue":"9","key":"ref4","first-page":"1","article-title":"Extraintestinal pathogenic <italic>Escherichia coli<\/italic>: a combination of virulence with antibiotic resistance","volume":"3","author":"JD Pitout","year":"2012","journal-title":"Front Microbiol"},{"issue":"2\u20133","key":"ref5","first-page":"299","article-title":"Avian pathogenic <italic>Escherichia coli<\/italic> (APEC)","volume":"30","author":"M Dho-Moulin","year":"1999","journal-title":"Vet Res"},{"key":"ref6","first-page":"631","article-title":"Diseases of Poultry","author":"HJ Barnes","year":"2003"},{"issue":"3","key":"ref7","doi-asserted-by":"crossref","first-page":"163","DOI":"10.1016\/j.ijmm.2007.01.003","article-title":"Avian pathogenic, uropathogenic, and newborn meningitis-causing <italic>Escherichia coli<\/italic>: how closely related are they?","volume":"297","author":"C Ewers","year":"2007","journal-title":"Int J Med Microbiol"},{"issue":"1","key":"ref8","doi-asserted-by":"crossref","first-page":"88","DOI":"10.3201\/eid1601.091118","article-title":"Food reservoir for <italic>Escherichia coli<\/italic> causing urinary tract infections","volume":"16","author":"C Vincent","year":"2010","journal-title":"Emerg Infect Dis"},{"issue":"(9)","key":"ref9","first-page":"1","article-title":"Extraintestinal pathogenic <italic>Escherichia coli<\/italic> O1:K1:H7\/NM from human and avian origin: detection of clonal groups B2 ST95 and D ST59 with different host distribution","volume":"132","author":"A Mora","year":"2009","journal-title":"BMC Microbiol"},{"issue":"8","key":"ref10","doi-asserted-by":"crossref","first-page":"e105016","DOI":"10.1371\/journal.pone.0105016","article-title":"Overlapped sequence types (STs) and serogroups of avian pathogenic (APEC) and human extra-intestinal pathogenic (ExPEC) <italic>Escherichia coli<\/italic> isolated in Brazil","volume":"9","author":"RP Maluta","year":"2014","journal-title":"PLoS One"},{"issue":"8","key":"ref11","doi-asserted-by":"crossref","first-page":"3412","DOI":"10.1128\/IAI.00347-10","article-title":"Avian-pathogenic <italic>Escherichia coli<\/italic> strains are similar to neonatal meningitis <italic>E<\/italic>. <italic>coli<\/italic> strains and are able to cause meningitis in the rat model of human disease","volume":"78","author":"KA Tivendale","year":"2010","journal-title":"Infect Immun"},{"issue":"6","key":"ref12","doi-asserted-by":"crossref","first-page":"1121","DOI":"10.1007\/s10096-011-1417-5","article-title":"Is <italic>Escherichia coli<\/italic> urinary tract infection a zoonosis? Proof of direct link with production animals and meat","volume":"31","author":"L Jakobsen","year":"2012","journal-title":"Eur J Clin Microbiol Infect Dis"},{"issue":"3","key":"ref13","doi-asserted-by":"crossref","first-page":"838","DOI":"10.1128\/IAI.00585-12","article-title":"Sequencing and functional annotation of avian pathogenic <italic>Escherichia coli<\/italic> serogroup O78 strains reveal the evolution of <italic>E<\/italic>. <italic>coli<\/italic> lineages pathogenic for poultry via distinct mechanisms","volume":"81","author":"F Dziva","year":"2013","journal-title":"Infect Immun"},{"issue":"11","key":"ref14","doi-asserted-by":"crossref","first-page":"e112048","DOI":"10.1371\/journal.pone.0112048","article-title":"Comparative genomic analysis shows that avian pathogenic <italic>Escherichia coli<\/italic> isolate IMT5155 (O2:K1:H5; ST complex 95, ST140) shares close relationship with ST95 APEC O1:K1 and human ExPEC O18:K1 strains","volume":"9","author":"X Zhu Ge","year":"2014","journal-title":"PLoS One"},{"issue":"29","key":"ref15","first-page":"1","article-title":"Foodborne urinary tract infections: a new paradigm for antimicrobial-resistant foodborne illness","volume":"4","author":"L Nordstrom","year":"2013","journal-title":"Front Microbiol"},{"issue":"5","key":"ref16","doi-asserted-by":"crossref","first-page":"712","DOI":"10.1093\/cid\/cis502","article-title":"Food-borne origins of <italic>Escherichia coli<\/italic> causing extraintestinal infections","volume":"55","author":"AR Manges","year":"2012","journal-title":"Clin Infect Dis"},{"issue":"2","key":"ref17","doi-asserted-by":"crossref","first-page":"346","DOI":"10.1093\/jac\/dkr451","article-title":"Population structure, virulence potential and antibiotic susceptibility of uropathogenic <italic>Escherichia coli<\/italic> from Northwest England","volume":"67","author":"TM Gibreel","year":"2012","journal-title":"J Antimicrob Chemother"},{"key":"ref18","first-page":"126","article-title":"<italic>Escherichia coli<\/italic> associated with neonatal diarrhoea in piglets and calves","volume":"13","author":"PAM Guinee","year":"1981","journal-title":"Curr Top Vet Med Anim Sci"},{"issue":"2","key":"ref19","doi-asserted-by":"crossref","first-page":"417","DOI":"10.1128\/JCM.00674-07","article-title":"Virulence genotypes and phylogenetic background of <italic>Escherichia coli<\/italic> serogroup O6 isolates from humans, dogs, and cats","volume":"46","author":"JR Johnson","year":"2008","journal-title":"J Clin Microbiol"},{"issue":"12","key":"ref20","doi-asserted-by":"crossref","first-page":"3987","DOI":"10.1128\/JCM.00816-08","article-title":"Identification of minimal predictors of avian pathogenic <italic>Escherichia coli<\/italic> virulence for use as a rapid diagnostic tool","volume":"46","author":"TJ Johnson","year":"2008","journal-title":"J Clin Microbiol"},{"issue":"1","key":"ref21","doi-asserted-by":"crossref","first-page":"261","DOI":"10.1086\/315217","article-title":"Extended virulence genotypes of <italic>Escherichia coli<\/italic> strains from patients with urosepsis in relation to phylogeny and host compromise","volume":"181","author":"JR Johnson","year":"2000","journal-title":"J Infect Dis"},{"issue":"9","key":"ref22","doi-asserted-by":"crossref","first-page":"880","DOI":"10.1111\/j.1469-0691.2006.01461.x","article-title":"Pathogenicity island markers in commensal and uropathogenic <italic>Escherichia coli<\/italic> isolates","volume":"12","author":"M Sabat\u00e9","year":"2006","journal-title":"Clin Microbiol Infect"},{"issue":"10","key":"ref23","doi-asserted-by":"crossref","first-page":"1521","DOI":"10.1086\/340206","article-title":"Molecular epidemiology of 3 putative virulence genes for <italic>Escherichia coli<\/italic> urinary tract infection <italic>usp<\/italic>-<italic>iha<\/italic> and <italic>iroN<\/italic>","volume":"185","author":"RJ Bauer","year":"2002","journal-title":"J Infect Dis"},{"key":"ref24","doi-asserted-by":"crossref","first-page":"289024","DOI":"10.1155\/2014\/289024","article-title":"Virulence profiles, phylogenetic background, and antibiotic resistance of <italic>Escherichia coli<\/italic> isolated from turkeys with airsacculitis","volume":"2014","author":"MP Cunha","year":"2014","journal-title":"Scientific World Journal"},{"issue":"1","key":"ref25","doi-asserted-by":"crossref","first-page":"58","DOI":"10.1111\/1758-2229.12019","article-title":"The Clermont <italic>Escherichia coli<\/italic> phylo-typing method revisited: improvement of specificity and detection of new phylo-groups","volume":"5","author":"O Clermont","year":"2013","journal-title":"Environ Microbiol Rep"},{"issue":"1","key":"ref26","doi-asserted-by":"crossref","first-page":"59","DOI":"10.1089\/fpd.2006.3.59","article-title":"Standardization of pulsed-field gel electrophoresis protocols for the subtyping of <italic>Escherichia coli<\/italic> O157:H7, <italic>Salmonella<\/italic>, and <italic>Shigella<\/italic> for PulseNet","volume":"3","author":"EM Ribot","year":"2006","journal-title":"Foodborne Pathog Dis"},{"key":"ref27","article-title":"Clinical and Laboratory Standards Institute Performance Standards for Antimicrobial Susceptibility Testing: 24th informational supplement M100-S24","year":"2014"},{"issue":"4","key":"ref28","doi-asserted-by":"crossref","first-page":"355","DOI":"10.1080\/03079450802216652","article-title":"Colibacillosis in poultry: unravelling the molecular basis of virulence of avian pathogenic <italic>Escherichia coli<\/italic> in their natural hosts","volume":"37","author":"F Dziva","year":"2008","journal-title":"Avian Pathol"},{"issue":"1","key":"ref29","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/j.1574-695X.2011.00797.x","article-title":"<italic>Escherichia coli<\/italic> from animal reservoirs as a potential source of human extraintestinal pathogenic <italic>E<\/italic>. <italic>coli<\/italic>","volume":"62","author":"L Belanger","year":"2011","journal-title":"FEMS Immunol Med Microbiol"},{"issue":"22","key":"ref30","doi-asserted-by":"crossref","first-page":"7043","DOI":"10.1128\/AEM.01395-08","article-title":"Comparison of extraintestinal pathogenic <italic>Escherichia coli<\/italic> strains from human and avian sources reveals a mixed subset representing potential zoonotic pathogens","volume":"74","author":"TJ Johnson","year":"2008","journal-title":"Appl Environ Microbiol"},{"issue":"Pt 6","key":"ref31","doi-asserted-by":"crossref","first-page":"2097","DOI":"10.1099\/mic.0.27499-0","article-title":"Comparison of <italic>Escherichia coli<\/italic> isolates implicated in human urinary tract infection and avian colibacillosis","volume":"151","author":"KE Rodriguez-Siek","year":"2005","journal-title":"Microbiology"},{"issue":"4","key":"ref32","first-page":"B4187","article-title":"Bacterial characteristics of importance for recurrent urinary tract infections caused by Escherichia coli","volume":"58","author":"K Ejrnaes","year":"2011","journal-title":"Dan Med Bull"},{"issue":"1","key":"ref33","doi-asserted-by":"crossref","first-page":"140","DOI":"10.1186\/s12917-016-0762-0","article-title":"Diversity of <italic>Escherichia coli<\/italic> strains involved in vertebral osteomyelitis and arthritis in broilers in Brazil","volume":"12","author":"JF Braga","year":"2016","journal-title":"BMC Vet Res"},{"issue":"Pt 4","key":"ref34","doi-asserted-by":"crossref","first-page":"1179","DOI":"10.1099\/mic.0.27809-0","article-title":"<italic>ibeA<\/italic>, a virulence factor of avian pathogenic <italic>Escherichia coli<\/italic>","volume":"151","author":"P Germon","year":"2005","journal-title":"Microbiology"},{"issue":"1","key":"ref35","doi-asserted-by":"crossref","first-page":"960","DOI":"10.1186\/s12864-016-3289-7","article-title":"Comparative genomics of European avian pathogenic <italic>E<\/italic>. <italic>coli<\/italic> (APEC)","volume":"17","author":"G Cordoni","year":"2016","journal-title":"BMC Genomics"},{"issue":"10","key":"ref36","doi-asserted-by":"crossref","first-page":"1661","DOI":"10.1007\/s10096-016-2707-8","article-title":"Trends in ExPEC serogroups in the UK and their significance","volume":"35","author":"H Ciesielczuk","year":"2016","journal-title":"Eur J Clin Microbiol Infect Dis"},{"issue":"8","key":"ref37","doi-asserted-by":"crossref","first-page":"2139","DOI":"10.1093\/jac\/dkw145","article-title":"The population structure of <italic>Escherichia coli<\/italic> causing bacteraemia in the UK and Ireland between 2001 and 2010","volume":"71","author":"M Day","year":"2016","journal-title":"J Antimicrob Chemother"},{"issue":"4","key":"ref38","doi-asserted-by":"crossref","first-page":"303","DOI":"10.1089\/mdr.2009.0067","article-title":"Clonal composition of <italic>Escherichia coli<\/italic> in the state of Rio de Janeiro, Brazil","volume":"15","author":"RCS Dias","year":"2009","journal-title":"Microb Drug Resist"},{"key":"ref39","article-title":"<italic>Escherichia coli<\/italic> sequence type 73 as a cause of community acquired urinary tract infection in men and women in Rio de Janeiro, Brazil","author":"APS da Silva","year":"2017","journal-title":"Diagn Microbiol Infect Dis. Forthcoming"},{"issue":"11","key":"ref40","doi-asserted-by":"crossref","first-page":"e0143335","DOI":"10.1371\/journal.pone.0143335","article-title":"Multilocus sequence typing and virulence profiles in uropathogenic <italic>Escherichia coli<\/italic> isolated from cats in the United States","volume":"10","author":"X Liu","year":"2015","journal-title":"PLoS One"},{"issue":"12","key":"ref41","first-page":"4078","article-title":"Multiple-host sharing, long-term persistence and virulence of <italic>Escherichia coli<\/italic> clones from human and animal household members","volume":"46","author":"JR Johnson","year":"2008"},{"issue":"2","key":"ref42","doi-asserted-by":"crossref","first-page":"339","DOI":"10.1093\/jac\/dkv365","article-title":"Increase in bacteraemia cases in the East Midlands region of the UK due to MDR <italic>Escherichia coli<\/italic> ST73: high levels of genomic and plasmid diversity in causative isolates","volume":"71","author":"F Alhashash","year":"2015","journal-title":"J Antimicrob Chemother"},{"issue":"1","key":"ref43","doi-asserted-by":"crossref","first-page":"67","DOI":"10.1089\/mdr.2010.0063","article-title":"CTX-M-15-producing <italic>Escherichia coli<\/italic> clinical isolates in Cairo (Egypt), including isolates of clonal complex ST10 and clones ST131, ST73, and ST405 in both community and hospital settings","volume":"17","author":"N Fam","year":"2011","journal-title":"Microb Drug Resist"},{"issue":"11","key":"ref44","doi-asserted-by":"crossref","first-page":"e0143191","DOI":"10.1371\/journal.pone.0143191","article-title":"Diversity of multi-drug resistant Avian Pathogenic <italic>Escherichia coli<\/italic> (APEC) causing outbreaks of colibacillosis in broilers during 2012 in Spain","volume":"10","author":"M Sol\u00e1-Gin\u00e9s","year":"2015","journal-title":"PLoS One"}],"container-title":["PLOS ONE"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pone.0178970","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2018,10,20]],"date-time":"2018-10-20T09:50:20Z","timestamp":1540029020000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pone.0178970"}},"subtitle":[],"editor":[{"given":"Dongsheng","family":"Zhou","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2017,6,8]]},"references-count":44,"journal-issue":{"issue":"6","published-online":{"date-parts":[[2017,6,8]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pone.0178970","relation":{},"ISSN":["1932-6203"],"issn-type":[{"value":"1932-6203","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,6,8]]}}}