{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,28]],"date-time":"2026-09-28T17:39:42Z","timestamp":1790617182244,"version":"4.1.0"},"reference-count":38,"publisher":"Public Library of Science (PLoS)","issue":"11","license":[{"start":{"date-parts":[[2018,11,29]],"date-time":"2018-11-29T00:00:00Z","timestamp":1543449600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"Ministero dell\u2019Istruzione, dell\u2019Universit\u00e0 e della Ricerca (IT)","award":["PON03PE_00090_02"],"award-info":[{"award-number":["PON03PE_00090_02"]}]}],"content-domain":{"domain":["www.plosone.org"],"crossmark-restriction":false},"short-container-title":["PLoS ONE"],"DOI":"10.1371\/journal.pone.0199403","type":"journal-article","created":{"date-parts":[[2018,11,29]],"date-time":"2018-11-29T13:58:55Z","timestamp":1543499935000},"page":"e0199403","update-policy":"https:\/\/doi.org\/10.1371\/journal.pone.corrections_policy","source":"Crossref","is-referenced-by-count":14,"title":["Impact of Bactrocera oleae on the fungal microbiota of ripe olive drupes"],"prefix":"10.1371","volume":"13","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6090-7200","authenticated-orcid":true,"given":"Ahmed","family":"Abdelfattah","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"David","family":"Ruano-Rosa","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Santa Olga","family":"Cacciola","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Maria G.","family":"Li Destri Nicosia","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9737-2593","authenticated-orcid":true,"given":"Leonardo","family":"Schena","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"340","published-online":{"date-parts":[[2018,11,29]]},"reference":[{"key":"ref1","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1023\/A:1022444005336","article-title":"Olive groves: &quot;The life and identity of the Mediterranean&quot;","volume":"20","author":"A Loumou","year":"2003","journal-title":"Agric Human Values"},{"key":"ref2","unstructured":"FAOSTAT (2017) Food and Agriculture Organization of the United Nations. Food and Agriculture Organization of the United Nations."},{"key":"ref3","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1007\/s11104-010-0629-2","article-title":"Verticillium wilt of olive: a case study to implement an integrated strategy to control a soil-borne pathogen","volume":"344","author":"FJ L\u00f3pez-Escudero","year":"2011","journal-title":"Plant Soil"},{"key":"ref4","first-page":"469","article-title":"Abiotic diseases of olive","volume":"94","author":"SM Sanzani","year":"2012","journal-title":"J Plant Pathol"},{"key":"ref5","first-page":"223","article-title":"Olive diseases and Disorders","author":"SO Cacciola","year":"2011"},{"key":"ref6","doi-asserted-by":"crossref","first-page":"195","DOI":"10.1007\/s10584-008-9528-4","article-title":"Effects of climate warming on olive and olive fly (<italic>Bactrocera oleae<\/italic> (Gmelin)) in California and Italy","volume":"95","author":"AP Gutierrez","year":"2009","journal-title":"Clim Change"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"e66533","DOI":"10.1371\/journal.pone.0066533","article-title":"Analysis of the olive fruit fly <italic>Bactrocera oleae<\/italic> transcriptome and phylogenetic classification of the major detoxification gene families","volume":"8","author":"N Pavlidi","year":"2013","journal-title":"PLoS One"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"42633","DOI":"10.1038\/srep42633","article-title":"Transcriptomic responses of the olive fruit fly <italic>Bactrocera oleae a<\/italic>nd its symbiont <italic>Candidatus Erwinia dacicola<\/italic> to olive feeding","volume":"7","author":"N Pavlidi","year":"2017","journal-title":"Sci Rep"},{"key":"ref9","doi-asserted-by":"crossref","first-page":"237","DOI":"10.1111\/eea.12609","article-title":"Review of the role of gut microbiota in mass rearing of the olive fruit fly, <italic>Bactrocera oleae<\/italic>, and its parasitoids","volume":"164","author":"E Ras","year":"2017","journal-title":"Entomol Exp Appl"},{"key":"ref10","doi-asserted-by":"crossref","first-page":"226","DOI":"10.1016\/j.tifs.2015.04.009","article-title":"A review of <italic>Bactrocera oleae<\/italic> (Rossi) impact in olive products: From the tree to the table","volume":"44","author":"R Malheiro","year":"2015","journal-title":"Trends Food Sci Technol"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"413","DOI":"10.1111\/jipb.12343","article-title":"Olive fruits infested with olive fly larvae respond with an ethylene burst and the emission of specific volatiles","volume":"58","author":"F Alagna","year":"2016","journal-title":"J Integr Plant Biol"},{"key":"ref12","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/j.biocontrol.2017.07.009","article-title":"Metabarcoding: A powerful tool to investigate microbial communities and shape future plant protection strategies","volume":"120","author":"A Abdelfattah","year":"2018","journal-title":"Biol Control"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"677","DOI":"10.1007\/s00248-016-0864-z","article-title":"A metabarcoding survey on the fungal microbiota associated to the olive fruit fly","volume":"73","author":"A Malacrin\u00f2","year":"2017","journal-title":"Microb Ecol"},{"key":"ref14","doi-asserted-by":"crossref","first-page":"e0131069","DOI":"10.1371\/journal.pone.0131069","article-title":"Metabarcoding analysis of fungal diversity in the phyllosphere and carposphere of olive (<italic>Olea europaea<\/italic>)","volume":"10","author":"A Abdelfattah","year":"2015","journal-title":"PLoS One"},{"key":"ref15","doi-asserted-by":"crossref","first-page":"e114031","DOI":"10.1371\/journal.pone.0114031","article-title":"Molecular analysis of <italic>Colletotrichum<\/italic> species in the carposphere and phyllosphere of olive","volume":"9","author":"S Mosca","year":"2014","journal-title":"PLoS One"},{"key":"ref16","doi-asserted-by":"crossref","first-page":"e40863","DOI":"10.1371\/journal.pone.0040863","article-title":"High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples","volume":"7","author":"H Toju","year":"2012","journal-title":"PLoS One"},{"key":"ref17","doi-asserted-by":"crossref","first-page":"70","DOI":"10.1016\/j.mimet.2006.03.003","article-title":"Assessing the potential of regions of the nuclear and mitochondrial genome to develop a \u201cmolecular tool box\u201d for the detection and characterization of <italic>Phytophthora<\/italic> species","volume":"67","author":"L Schena","year":"2006","journal-title":"J Microbiol Methods"},{"key":"ref18","first-page":"315","article-title":"PCR protocols: a guide to methods and applications","author":"TJ White","year":"1990"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"2114","DOI":"10.1093\/bioinformatics\/btu170","article-title":"Trimmomatic: a flexible trimmer for Illumina sequence data","volume":"30","author":"AM Bolger","year":"2014","journal-title":"Bioinformatics"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"31","DOI":"10.1186\/1471-2105-13-31","article-title":"PANDAseq: paired-end assembler for illumina sequences","volume":"13","author":"AP Masella","year":"2012","journal-title":"BMC Bioinformatics"},{"key":"ref21","doi-asserted-by":"crossref","unstructured":"Rognes T, Flouri T, Nichols B, Quince C, Mah\u00e9 F (2016) VSEARCH: a versatile open source tool for metagenomics. PeerJ Preprints 4: e2409v2401.","DOI":"10.7717\/peerj.2584"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"335","DOI":"10.1038\/nmeth.f.303","article-title":"QIIME allows analysis of high-throughput community sequencing data","volume":"7","author":"JG Caporaso","year":"2010","journal-title":"Nat Methods"},{"key":"ref23","doi-asserted-by":"crossref","first-page":"16047","DOI":"10.1038\/hortres.2016.47","article-title":"Spatial and compositional variation in the fungal communities of organic and conventionally grown apple fruit at the consumer point-of-purchase","volume":"3","author":"A Abdelfattah","year":"2016","journal-title":"Hortic Res"},{"key":"ref24","doi-asserted-by":"crossref","first-page":"1200","DOI":"10.1038\/nmeth.2658","article-title":"Differential abundance analysis for microbial marker-gene surveys","volume":"10","author":"JN Paulson","year":"2013","journal-title":"Nat Methods"},{"key":"ref25","doi-asserted-by":"crossref","first-page":"325","DOI":"10.2307\/1942268","article-title":"An ordination of the upland forest communities of southern Wisconsin","volume":"27","author":"JR Bray","year":"1957","journal-title":"Ecol Monogr"},{"key":"ref26","doi-asserted-by":"crossref","first-page":"8228","DOI":"10.1128\/AEM.71.12.8228-8235.2005","article-title":"UniFrac: a new phylogenetic method for comparing microbial communities","volume":"71","author":"C Lozupone","year":"2005","journal-title":"Appl Environ Microbiol"},{"key":"ref27","doi-asserted-by":"crossref","first-page":"117","DOI":"10.1111\/j.1442-9993.1993.tb00438.x","article-title":"Non-parametric multivariate analyses of changes in community structure","volume":"18","author":"KR Clarke","year":"1993","journal-title":"Aust J Ecol"},{"key":"ref28","doi-asserted-by":"crossref","first-page":"583","DOI":"10.1080\/01621459.1952.10483441","article-title":"Use of ranks in one-criterion variance analysis. \u200e","volume":"47","author":"WH Kruskal","year":"1952","journal-title":"J Am Stat Assoc"},{"key":"ref29","doi-asserted-by":"crossref","first-page":"292","DOI":"10.1080\/03235408.2013.809183","article-title":"Effect of fungal species involved in the olive fruit rot on the qualitative properties of olive oil","volume":"47","author":"M Torbati","year":"2014","journal-title":"Arch Phytopathol Plant Protect"},{"key":"ref30","doi-asserted-by":"crossref","first-page":"739","DOI":"10.1007\/s00248-016-0874-x","article-title":"Analysis of the Fungal Diversity in Citrus Leaves with Greasy Spot Disease Symptoms","volume":"73","author":"A Abdelfattah","year":"2017","journal-title":"Microb Ecol"},{"key":"ref31","doi-asserted-by":"crossref","first-page":"793","DOI":"10.1007\/s00253-009-1882-2","article-title":"Bioproducts from Aureobasidium pullulans, a biotechnologically important yeast","volume":"82","author":"Z Chi","year":"2009","journal-title":"Appl Microbiol Biotechnol"},{"key":"ref32","doi-asserted-by":"crossref","first-page":"245","DOI":"10.1016\/j.postharvbio.2005.02.007","article-title":"Control of postharvest rots of sweet cherries by pre-and postharvest applications of <italic>Aureobasidium pullulans<\/italic> in combination with calcium chloride or sodium bicarbonate","volume":"36","author":"A Ippolito","year":"2005","journal-title":"Postharvest Biol Technol"},{"key":"ref33","doi-asserted-by":"crossref","first-page":"79","DOI":"10.1007\/s11274-006-9195-4","article-title":"Antimicrobial potentials of endophytic fungi residing in <italic>Quercus variabilis<\/italic> and brefeldin A obtained from <italic>Cladosporium<\/italic> sp","volume":"23","author":"FW Wang","year":"2007","journal-title":"World J Microbiol Biotechnol"},{"key":"ref34","doi-asserted-by":"crossref","first-page":"265","DOI":"10.1016\/S0925-5214(00)00104-6","article-title":"Control of postharvest decay of apple fruit by <italic>Aureobasidium pullulans<\/italic> and induction of defense responses","volume":"19","author":"A Ippolito","year":"2000","journal-title":"Postharvest Biol Technol"},{"key":"ref35","doi-asserted-by":"crossref","first-page":"209","DOI":"10.1016\/S0925-5214(03)00111-X","article-title":"Control of postharvest rots of sweet cherries and table grapes with endophytic isolates of <italic>Aureobasidium pullulans<\/italic>","volume":"30","author":"L Schena","year":"2003","journal-title":"Postharvest Biol Technol"},{"key":"ref36","doi-asserted-by":"crossref","first-page":"43","DOI":"10.1016\/j.biocontrol.2017.03.005","article-title":"Antifungal activity of native yeasts from different microenvironments against <italic>Colletotrichum gloeosporioides<\/italic> on ripe olive fruits","volume":"120","author":"VM Pesce","year":"2017","journal-title":"Biol Control"},{"key":"ref37","doi-asserted-by":"crossref","first-page":"7647","DOI":"10.1128\/AEM.05565-11","article-title":"Geographical location determines the population structure in phyllosphere microbial communities of a salt-excreting desert tree","volume":"77","author":"OM Finkel","year":"2011","journal-title":"Appl Environ Microbiol"},{"key":"ref38","doi-asserted-by":"crossref","first-page":"682","DOI":"10.1111\/j.1439-0418.2008.01334.x","article-title":"Relationships between the olive fly and bacteria","volume":"132","author":"P Sacchetti","year":"2008","journal-title":"J Appl Entomol"}],"container-title":["PLOS ONE"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pone.0199403","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,5,11]],"date-time":"2020-05-11T11:10:24Z","timestamp":1589195424000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pone.0199403"}},"subtitle":[],"editor":[{"given":"Nikos T.","family":"Papadopoulos","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2018,11,29]]},"references-count":38,"journal-issue":{"issue":"11","published-online":{"date-parts":[[2018,11,29]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pone.0199403","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/342543","asserted-by":"object"}]},"ISSN":["1932-6203"],"issn-type":[{"value":"1932-6203","type":"electronic"}],"subject":[],"published":{"date-parts":[[2018,11,29]]}}}