{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,21]],"date-time":"2026-08-21T11:53:50Z","timestamp":1787313230064,"version":"build-2736575974"},"reference-count":102,"publisher":"Public Library of Science (PLoS)","issue":"11","license":[{"start":{"date-parts":[[2023,11,16]],"date-time":"2023-11-16T00:00:00Z","timestamp":1700092800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["www.plosone.org"],"crossmark-restriction":false},"short-container-title":["PLoS ONE"],"abstract":"<jats:p>Sweet fig (<jats:italic>M<\/jats:italic>.<jats:italic>acuminata<\/jats:italic>cv. Sotoumon) is an economically important dessert banana in Benin, with high nutritional, medicinal, and cultural values. Nevertheless, its productivity and yield are threatened by biotic and abiotic stresses. Relevant knowledge of the genetic diversity of this economically important crop is essential for germplasm conservation and the development of breeding programs. However, very little is known about the genetic makeup of this cultivar in Benin. To advance the understanding of genetic diversity in sweet fig banana germplasm, a Genotype-By-Sequencing (GBS) was performed on a panel of 273 accessions collected in different phytogeographical zones of Benin. GBS generated 8,457 quality SNPs, of which 1992 were used for analysis after filtering. The results revealed a low diversity in the studied germplasm (He = 0.0162). Genetic differentiation was overall very low in the collection as suggested by the negative differentiation index (Fstg = -0.003). The Analysis of Molecular Variance (AMOVA) indicated that the variation between accessions within populations accounted for 83.8% of the total variation observed (P &lt; 0.001). The analysis of population structure and neighbor-joining tree partitioned the germplasm into three clusters out of which a predominant major one contained 98.1% of all accessions. These findings demonstrate that current sweet fig banana genotypes shared a common genetic background, which made them vulnerable to biotic and abiotic stress. Therefore, broadening the genetic base of the crop while maintaining its quality attributes and improving yield performance is of paramount importance. Moreover, the large genetic group constitutes an asset for future genomic selection studies in the crop and can guide the profiling of its conservation strategies.<\/jats:p>","DOI":"10.1371\/journal.pone.0294315","type":"journal-article","created":{"date-parts":[[2023,11,16]],"date-time":"2023-11-16T18:47:14Z","timestamp":1700160434000},"page":"e0294315","update-policy":"https:\/\/doi.org\/10.1371\/journal.pone.corrections_policy","source":"Crossref","is-referenced-by-count":1,"title":["Narrow genetic diversity in germplasm from the Guinean and Sudano-Guinean zones in Benin indicates the need to broaden the genetic base of sweet fig banana (Musa acuminata cv Sotoumon)"],"prefix":"10.1371","volume":"18","author":[{"ORCID":"https:\/\/orcid.org\/0009-0008-3855-7636","authenticated-orcid":true,"given":"D\u00e8noumi B. 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H\u00e4kkinen","year":"2013","journal-title":"Taxon"},{"key":"pone.0294315.ref005","doi-asserted-by":"crossref","first-page":"1453","DOI":"10.1111\/nph.13856","article-title":"Evolutionary dynamics and biogeography of Musaceae reveal a correlation between the diversification of the banana family and the geological and climatic history of Southeast Asia","volume":"210","author":"SB Janssens","year":"2016","journal-title":"New Phytol"},{"key":"pone.0294315.ref006","doi-asserted-by":"crossref","first-page":"302","DOI":"10.1111\/j.1095-8339.1955.tb00015.x","article-title":"The taxonomy and origins of the cultivated bananas","volume":"55","author":"NW Simmonds","year":"1955","journal-title":"J Linn Soc London, Bot"},{"key":"pone.0294315.ref007","first-page":"1","article-title":"Preliminary analysis of the literature on the distribution of wild Musa species using MGIS and DIVA-GIS","author":"BP Pollefeys","year":"2004","journal-title":"Inibap"},{"key":"pone.0294315.ref008","doi-asserted-by":"crossref","first-page":"11311","DOI":"10.1073\/pnas.1102001108","article-title":"Multidisciplinary perspectives on (Musa spp.) domestication","volume":"108","author":"X Perrier","year":"2011","journal-title":"Proc Natl Acad Sci U S A"},{"key":"pone.0294315.ref009","doi-asserted-by":"crossref","first-page":"2140","DOI":"10.1093\/molbev\/msx164","article-title":"Evolution of the banana genome (musa acuminata) is impacted by large chromosomal translocations","volume":"34","author":"G Martin","year":"2017","journal-title":"Mol Biol Evol"},{"key":"pone.0294315.ref010","doi-asserted-by":"crossref","first-page":"319","DOI":"10.1093\/aob\/mcz078","article-title":"Two large reciprocal translocations characterized in the disease resistance-rich burmannica genetic group of Musa acuminata","volume":"124","author":"M Dupouy","year":"2019","journal-title":"Ann Bot"},{"key":"pone.0294315.ref011","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s13002-018-0280-1","article-title":"Banana and plantain production systems in Benin: Ethnobotanical investigation, varietal diversity, pests, and implications for better production","volume":"14","author":"MC Chabi","year":"2018","journal-title":"J Ethnobiol Ethnomed"},{"key":"pone.0294315.ref012","article-title":"Musalogue: A Catalogue of Musa Germplasm, Diversity in the Genus Musa","author":"JW Daniells","year":"2001","journal-title":"Cirad"},{"key":"pone.0294315.ref013","first-page":"33","article-title":"La diversit\u00e9 g\u00e9n\u00e9tique des bananiers cultiv\u00e9s: situation actuelle et perspectives","volume":"55","author":"F Bakry","year":"2005","journal-title":"Le s\u00e9lectionneur Fran\u00e7ais"},{"key":"pone.0294315.ref014","unstructured":"Toessi GH. Distribution g\u00e9ographique des esp\u00e8ces de Fusarium spp. agent de la fusariose du bananier au Sud B\u00e9nin [Master of Science Thesis]. UFR\/Biosciences, Universit\u00e9 Felix Houphouet Boigny, Abidjan. 2018."},{"key":"pone.0294315.ref015","doi-asserted-by":"crossref","first-page":"172","DOI":"10.11648\/j.ajls.20200805.23","article-title":"Farmers\u2019 Knowledge, Perceptions and Management of Black Sigatoka in Small Plantain-Based Farms in Southern Benin","volume":"8","author":"F Alain Ahohouendo","year":"2020","journal-title":"Am J Life Sci"},{"key":"pone.0294315.ref016","first-page":"2015","article-title":"Importance of genetic diversity assessment in crop plants and its recent advances: An overview of its analytical perspectives","author":"M Govindaraj","year":"2015","journal-title":"Genet Res Int"},{"key":"pone.0294315.ref017","doi-asserted-by":"crossref","first-page":"115","DOI":"10.11598\/btb.2019.26.2.896","article-title":"Genetic variation of wild Musa acuminata Colla from Indonesia","volume":"26","author":"YS Poerba","year":"2019","journal-title":"Biotropia (Bogor)"},{"key":"pone.0294315.ref018","doi-asserted-by":"crossref","first-page":"147210","DOI":"10.1016\/j.gene.2023.147210","article-title":"Analysis of genetic diversity and agronomic variation in banana sub-populations for genomic selection under drought stress in southern Benin","volume":"859","author":"LF Mbo Nkoulou","year":"2023","journal-title":"Gene"},{"key":"pone.0294315.ref019","doi-asserted-by":"crossref","first-page":"723","DOI":"10.1023\/B:GRES.0000034578.37951.c4","article-title":"Genetic diversity of Musa diploid and triploid accessions from the Brazilian banana breeding program estimated by microsatellite markers","volume":"51","author":"S Creste","year":"2004","journal-title":"Genet Resour Crop Evol"},{"key":"pone.0294315.ref020","doi-asserted-by":"crossref","first-page":"19","DOI":"10.1093\/aob\/mcy156","article-title":"East african diploid and triploid bananas: A genetic complex transported from south-east Asia","volume":"123","author":"X Perrier","year":"2019","journal-title":"Ann Bot"},{"key":"pone.0294315.ref021","first-page":"585","article-title":"Genetic Diversity and Network Within Dessert Bananas","volume":"12","author":"S Hariyanto","year":"2021","journal-title":"Int J"},{"key":"pone.0294315.ref022","first-page":"13","article-title":"Hybridization, missing wild ancestors and the domestication of cultivated diploid bananas","author":"J Sardos","year":"2022","journal-title":"Front Plant Sci"},{"key":"pone.0294315.ref023","doi-asserted-by":"crossref","first-page":"679","DOI":"10.1139\/g02-033","article-title":"Ascertaining maternal and paternal lineage within Musa by chloroplast and mitochondrial DNA RFLP analyses","volume":"45","author":"F Carreel","year":"2002","journal-title":"Genome"},{"key":"pone.0294315.ref024","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1371\/journal.pone.0134096","article-title":"Molecular and cytogenetic characterization of wild Musa species","volume":"10","author":"J \u010c\u00ed\u017ekov\u00e1","year":"2015","journal-title":"PLoS One"},{"key":"pone.0294315.ref025","article-title":"Phylogeny and estimated genetic divergence times of banana cultivars (Musa spp.) from Java Island by maturase K (mat K) genes","author":"RT Probojati","year":"2021","journal-title":"Bull Natl Res Cent"},{"key":"pone.0294315.ref026","doi-asserted-by":"crossref","first-page":"332","DOI":"10.1631\/jzus.B0900310","article-title":"Analysis of genetic diversity in banana cultivars (Musa cvs.) from the South of Oman using AFLP markers and classification by phylogenetic, hierarchical clustering and principal component analyses","volume":"11","author":"UL Opara","year":"2010","journal-title":"J Zhejiang Univ Sci B"},{"key":"pone.0294315.ref027","doi-asserted-by":"crossref","first-page":"42","DOI":"10.22146\/jtbb.44047","article-title":"Clustering Analysis and Genome Inference of Pisang Raja Local Cultivars (Musa spp.) from Java Island by Random Amplified Polymorphic DNA (RAPD) Marker","volume":"4","author":"RT Probojati","year":"2019","journal-title":"J Trop Biodivers Biotechnol"},{"key":"pone.0294315.ref028","first-page":"13","article-title":"Genetic diversity and population structure of Musa accessions in ex situ conservation","author":"ON de Jesus","year":"2013","journal-title":"BMC Plant Biol"},{"key":"pone.0294315.ref029","first-page":"1449","article-title":"Assessing genetic diversity of some banana cultivars using inter simple sequence repeats (ISSR) markers","volume":"47","author":"P Wanvisait","year":"2019","journal-title":"Khon Kaen Agric J"},{"key":"pone.0294315.ref030","first-page":"1876","article-title":"Molecular characterization of diploid and triploid banana germplasms through DNA fingerprinting using ISSR markers","volume":"10","author":"S Saranya","year":"2021","journal-title":"~ 1876 ~ Pharma Innov J"},{"key":"pone.0294315.ref031","doi-asserted-by":"crossref","first-page":"801","DOI":"10.1007\/s10531-016-1273-9","article-title":"Molecular and cytological characterization of the global Musa germplasm collection provides insights into the treasure of banana diversity","volume":"26","author":"P Christelov\u00e1","year":"2017","journal-title":"Biodivers Conserv"},{"key":"pone.0294315.ref032","first-page":"36","article-title":"Genetic diversity and structure of plantain (Musa sapientum L.) landraces from C\u00f4te d \u2018 Ivoire using SSR markers Genetic diversity and structure of plantain (Musa sapientum L.) landraces from C\u00f4te d \u2018 Ivoire using SSR markers","volume":"7","author":"KGC Koffi","year":"2019","journal-title":"Eur J Biotechnol Biosci Eur"},{"key":"pone.0294315.ref033","first-page":"270","article-title":"Identification of banana accessions sampled from subtropical region of turkey using srap markers","volume":"21","author":"H Pinar","year":"2015","journal-title":"Bulg J Agric Sci"},{"key":"pone.0294315.ref034","first-page":"52","article-title":"Assessment of Genetic Diversity among Musa Cultivars based on Sequence-Related Amplified Polymorphism Technique","volume":"15","author":"T Boonsrangsom","year":"2020","journal-title":"Naresuan Univ J Sci Technol 2020"},{"key":"pone.0294315.ref035","doi-asserted-by":"crossref","first-page":"1269","DOI":"10.1093\/aob\/mcw170","article-title":"DArT whole genome profiling provides insights on the evolution and taxonomy of edible Banana (Musa spp.)","volume":"118","author":"J Sardos","year":"2016","journal-title":"Ann Bot"},{"key":"pone.0294315.ref036","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1371\/journal.pone.0003376","article-title":"Rapid SNP discovery and genetic mapping using sequenced RAD markers","volume":"3","author":"NA Baird","year":"2008","journal-title":"PLoS One"},{"key":"pone.0294315.ref037","first-page":"36","article-title":"Genome-wide identification of SNPs and copy number variation in common bean (Phaseolus vulgaris L.) using genotyping-by-sequencing (GBS)","author":"A Ariani","year":"2016","journal-title":"Mol Breed"},{"key":"pone.0294315.ref038","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1371\/journal.pone.0019379","article-title":"A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species","volume":"6","author":"RJ Elshire","year":"2011","journal-title":"PLoS One"},{"key":"pone.0294315.ref039","first-page":"19","article-title":"Enhancement of Glen Moy x Latham raspberry linkage map using GbS to further understand control of developmental processes leading to fruit ripening","author":"CA Hackett","year":"2018","journal-title":"BMC Genet"},{"key":"pone.0294315.ref040","doi-asserted-by":"crossref","first-page":"1","DOI":"10.3389\/fpls.2015.00162","article-title":"Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea","volume":"6","author":"A Kujur","year":"2015","journal-title":"Front Plant Sci"},{"key":"pone.0294315.ref041","doi-asserted-by":"crossref","first-page":"66","DOI":"10.1111\/eva.12624","article-title":"Genetic diversity and relationship between domesticated rye and its wild relatives as revealed through genotyping-by-sequencing","volume":"12","author":"M Schreiber","year":"2019","journal-title":"Evol Appl"},{"key":"pone.0294315.ref042","first-page":"50","volume-title":"Flore Analytique du B\u00e9nin","author":"A Akoegninou","year":"2006"},{"key":"pone.0294315.ref043","unstructured":"Redlands, C.E.S.R.I. 2015. ArcGIS Desktop: Ver 10.4. ArcGIS,2015."},{"key":"pone.0294315.ref044","unstructured":"INSAE. Cahier des villages et quartiers de ville du departement du Littoral (RGPH-4, 2013). Rgph-4. 2016."},{"key":"pone.0294315.ref045","unstructured":"IPGRI-INIPAB\/CIRAD. Descripteur pour le bananier (Musa spp.). Institut international des ressources phytog\u00e9n\u00e9tiques;, Centre de coop\u00e9ration internationale en recherche agronomique pour le d\u00e9veloppement, editors. Rome, Italie; Montepelier, France; 1996."},{"key":"pone.0294315.ref046","doi-asserted-by":"crossref","first-page":"67","DOI":"10.1007\/978-1-61779-870-2_5","article-title":"Diversity arrays technology: A generic genome profiling technology on open platforms","volume":"888","author":"A Kilian","year":"2012","journal-title":"Methods Mol Biol"},{"key":"pone.0294315.ref047","doi-asserted-by":"crossref","first-page":"213","DOI":"10.1038\/nature11241","article-title":"The banana (Musa acuminata) genome and the evolution of monocotyledonous plants","volume":"488","author":"A D\u2019hont","year":"2012","journal-title":"Nature"},{"key":"pone.0294315.ref048","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s12864-016-2579-4","article-title":"Improvement of the banana \u201cMusa acuminata\u201d reference sequence using NGS data and semi-automated bioinformatics methods","volume":"17","author":"G Martin","year":"2016","journal-title":"BMC Genomics"},{"key":"pone.0294315.ref049","doi-asserted-by":"crossref","first-page":"691","DOI":"10.1111\/1755-0998.12745","article-title":"dartr: An r package to facilitate analysis of SNP data generated from reduced representation genome sequencing","volume":"18","author":"B Gruber","year":"2018","journal-title":"Mol Ecol Resour"},{"key":"pone.0294315.ref050","doi-asserted-by":"crossref","first-page":"886","DOI":"10.1093\/czoolo\/61.5.886","article-title":"Statistical measures of genetic differentiation of populations: Rationales, history and current states","volume":"61","author":"L Ma","year":"2015","journal-title":"Curr Zool"},{"key":"pone.0294315.ref051","first-page":"359","article-title":"the Genetics of Populations, Volume 4: Variability within and among Natural Populations","volume":"35","author":"Wright S. Evolution","year":"1978","journal-title":"Biometrics"},{"key":"pone.0294315.ref052","first-page":"1","article-title":"Poppr: An R package for genetic analysis of populations with clonal, partially clonal, and\/or sexual reproduction","volume":"2014","author":"ZN Kamvar","year":"2014","journal-title":"PeerJ"},{"key":"pone.0294315.ref053","doi-asserted-by":"crossref","first-page":"945","DOI":"10.1093\/genetics\/155.2.945","article-title":"Inference of population structure using multilocus genotype data","volume":"155","author":"JK Pritchard","year":"2000","journal-title":"Genetics"},{"key":"pone.0294315.ref054","doi-asserted-by":"crossref","first-page":"2611","DOI":"10.1111\/j.1365-294X.2005.02553.x","article-title":"Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study","volume":"14","author":"G Evanno","year":"2005","journal-title":"Mol Ecol"},{"key":"pone.0294315.ref055","doi-asserted-by":"crossref","first-page":"359","DOI":"10.1007\/s12686-011-9548-7","article-title":"STRUCTURE HARVESTER: A website and program for visualizing STRUCTURE output and implementing the Evanno method","volume":"4","author":"DA Earl","year":"2012","journal-title":"Conserv Genet Resour"},{"key":"pone.0294315.ref056","doi-asserted-by":"crossref","first-page":"1547","DOI":"10.1093\/molbev\/msy096","article-title":"MEGA X: Molecular evolutionary genetics analysis across computing platforms","volume":"35","author":"S Kumar","year":"2018","journal-title":"Mol Biol Evol"},{"key":"pone.0294315.ref057","doi-asserted-by":"crossref","first-page":"W293","DOI":"10.1093\/nar\/gkab301","article-title":"Interactive tree of life (iTOL) v5: An online tool for phylogenetic tree display and annotation","volume":"49","author":"I Letunic","year":"2021","journal-title":"Nucleic Acids Res"},{"key":"pone.0294315.ref058","article-title":"Principles of Cultivar Development, vol. 1, Theory and Technique","author":"WR Fehr","year":"1987","journal-title":"Soil Science"},{"key":"pone.0294315.ref059","doi-asserted-by":"crossref","first-page":"167","DOI":"10.1016\/j.pbi.2010.01.004","article-title":"Accessing genetic diversity for crop improvement","volume":"13","author":"JC Glaszmann","year":"2010","journal-title":"Curr Opin Plant Biol"},{"key":"pone.0294315.ref060","first-page":"11","article-title":"A multi gene sequence-based phylogeny of the Musaceae (banana) family","author":"P Christelov\u00e1","year":"2011","journal-title":"BMC Evol Biol"},{"key":"pone.0294315.ref061","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s12864-016-3297-7","article-title":"Genome-wide SNP discovery and population structure analysis in pepper (Capsicum annuum) using genotyping by sequencing","volume":"17","author":"Taranto F","year":"2016","journal-title":"BMC Genomics"},{"key":"pone.0294315.ref062","first-page":"10","article-title":"A Distinct Genetic Cluster in Cultivated Chickpea as Revealed by Genome\u2010wide Marker Discovery and Genotyping","author":"S Pavan","year":"2017","journal-title":"Plant Genome"},{"key":"pone.0294315.ref063","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/s41598-021-82437-4","article-title":"Population structure, genetic diversity and genomic selection signatures among a Brazilian common bean germplasm","volume":"11","author":"J Delfini","year":"2021","journal-title":"Sci Rep"},{"key":"pone.0294315.ref064","first-page":"1","article-title":"Transversions have larger regulatory effects than transitions","volume":"18","author":"C Guo","year":"2017","journal-title":"BMC Genomics"},{"key":"pone.0294315.ref065","first-page":"1","article-title":"Genetic diversity and population structure of a Camelina sativa spring panel","volume":"10","author":"Z Luo","year":"2019","journal-title":"Front Plant Sci"},{"key":"pone.0294315.ref066","first-page":"301","article-title":"Haplotype network analysis of wild banana relatives ensete glaucum, musa acuminata and musa balbisiana based on cpdna rbcl sequences in ex-situ collection","volume":"80","author":"L Hapsari","year":"2020","journal-title":"Indian J Genet Plant Breed"},{"key":"pone.0294315.ref067","doi-asserted-by":"crossref","first-page":"E7109","DOI":"10.1073\/pnas.1807334115","article-title":"GC content elevates mutation and recombination rates in the yeast Saccharomyces cerevisiae","volume":"115","author":"DA Kiktev","year":"2018","journal-title":"Proc Natl Acad Sci U S A"},{"key":"pone.0294315.ref068","doi-asserted-by":"crossref","first-page":"547","DOI":"10.1007\/s00122-015-2647-1","article-title":"The triploid East African Highland Banana (EAHB) genepool is genetically uniform arising from a single ancestral clone that underwent population expansion by vegetative propagation","volume":"129","author":"M Kitavi","year":"2016","journal-title":"Theor Appl Genet"},{"key":"pone.0294315.ref069","doi-asserted-by":"crossref","first-page":"1","DOI":"10.3389\/fpls.2018.01371","article-title":"Molecular and cytogenetic study of east african highland banana","volume":"9","author":"A N\u011bme\u010dkov\u00e1","year":"2018","journal-title":"Front Plant Sci"},{"key":"pone.0294315.ref070","first-page":"205","article-title":"Plant domestication, a unique opportunity to identify the genetic basis of adaptation","volume":"1","author":"J Ross-Ibarra","year":"2007","journal-title":"Light Evol"},{"key":"pone.0294315.ref071","doi-asserted-by":"crossref","first-page":"971","DOI":"10.1093\/biosci\/bix114","article-title":"The Genetics and Genomics of Plant Domestication","volume":"67","author":"MB Kantar","year":"2017","journal-title":"Bioscience"},{"key":"pone.0294315.ref072","doi-asserted-by":"crossref","first-page":"1246","DOI":"10.1007\/s00122-002-0914-4","article-title":"Genetic Diversity in Musa acuminata Colla and Musa balbisiana Colla and some of their natural hybrids using AFLP Markers","volume":"104","author":"G Ude","year":"2002","journal-title":"Theor Appl Genet"},{"key":"pone.0294315.ref073","first-page":"493","article-title":"Genetic diversity and differentiation analysis among wild antecedents of banana (Musa acuminata Colla) using RAPD markers","volume":"12","author":"S Mukunthakumar","year":"2013","journal-title":"Indian J Biotechnol"},{"key":"pone.0294315.ref074","doi-asserted-by":"crossref","first-page":"172","DOI":"10.12692\/ijb\/12.4.172-180","article-title":"Assessment of genetic diversity among thai banana cultivars (Musaspp.) based on RAPD and SRAP markers","volume":"12","author":"ROB Zozimo","year":"2018","journal-title":"Int J Biosci"},{"key":"pone.0294315.ref075","first-page":"1479","article-title":"Diversity and Population Structure Analysis, and Methods To","volume":"11","author":"MK Biswas","year":"2020","journal-title":"Genes (Basel)"},{"key":"pone.0294315.ref076","doi-asserted-by":"crossref","first-page":"49","DOI":"10.1007\/s10722-021-01202-8","article-title":"Assessment of genetic diversity of Musa species accessions with variable genomes using ISSR and SCoT markers","volume":"69","author":"DO Igwe","year":"2022","journal-title":"Genet Resour Crop Evol"},{"key":"pone.0294315.ref077","doi-asserted-by":"crossref","first-page":"840","DOI":"10.1038\/nrg3605","article-title":"Evolution of crop species: Genetics of domestication and diversification","volume":"14","author":"RS Meyer","year":"2013","journal-title":"Nat Rev Genet"},{"key":"pone.0294315.ref078","doi-asserted-by":"crossref","first-page":"1008","DOI":"10.1111\/tpj.14683","article-title":"Genome ancestry mosaics reveal multiple and cryptic contributors to cultivated banana","volume":"102","author":"G Martin","year":"2020","journal-title":"Plant J"},{"key":"pone.0294315.ref079","doi-asserted-by":"crossref","first-page":"7","DOI":"10.1093\/aob\/mcaa032","article-title":"Unravelling the complex story of intergenomic recombination in ABB allotriploid bananas","volume":"127","author":"A Cenci","year":"2021","journal-title":"Ann Bot"},{"key":"pone.0294315.ref080","first-page":"14","article-title":"A draft Musa balbisiana genome sequence for molecular genetics in polyploid, inter- and intra-specific Musa hybrids","author":"MW Davey","year":"2013","journal-title":"BMC Genomics"},{"key":"pone.0294315.ref081","doi-asserted-by":"crossref","first-page":"2267","DOI":"10.1007\/s10722-018-0690-x","article-title":"Collection of new diversity of wild and cultivated bananas (Musa spp.) in the Autonomous Region of Bougainville, Papua New Guinea","volume":"65","author":"J Sardos","year":"2018","journal-title":"Genet Resour Crop Evol"},{"key":"pone.0294315.ref082","article-title":"Wild to domesticates: genomes of edible diploid bananas hold traces of several undefined genepools","author":"J Sardos","year":"2021","journal-title":"bioRxiv. 2021"},{"key":"pone.0294315.ref083","doi-asserted-by":"crossref","first-page":"1591","DOI":"10.1007\/s00299-012-1273-5","article-title":"Exploring wild genetic resources of Musa acuminata Colla distributed in the humid forests of southern Western Ghats of peninsular India using ISSR markers","volume":"31","author":"P Padmesh","year":"2012","journal-title":"Plant Cell Rep"},{"key":"pone.0294315.ref084","doi-asserted-by":"crossref","first-page":"349","DOI":"10.1007\/s12298-015-0295-1","article-title":"Efficacy of RAPD, ISSR and DAMD markers in assessment of genetic variability and population structure of wild Musa acuminata colla","volume":"21","author":"A Lamare","year":"2015","journal-title":"Physiol Mol Biol Plants"},{"key":"pone.0294315.ref085","doi-asserted-by":"crossref","first-page":"514","DOI":"10.1046\/j.1523-1739.1999.98182.x","article-title":"Evaluation of the contribution of genetic research to the management of the endangered plant Zieria prostrata","volume":"13","author":"PM Hogbin","year":"1999","journal-title":"Conserv Biol"},{"key":"pone.0294315.ref086","doi-asserted-by":"crossref","first-page":"2389","DOI":"10.1046\/j.0962-1083.2001.01378.x","article-title":"Conservation genetics of the rare and endangered Leucopogon obtectus (Ericaceae)","volume":"10","author":"G Zawko","year":"2001","journal-title":"Mol Ecol"},{"key":"pone.0294315.ref087","first-page":"1","article-title":"Genetic variation and population structure of clonal Zingiber zerumbet at a fine geographic scale: a comparison with two closely related selfing and outcrossing Zingiber species","volume":"21","author":"R Huang","year":"2021","journal-title":"BMC Ecol Evol"},{"key":"pone.0294315.ref088","doi-asserted-by":"crossref","first-page":"47","DOI":"10.1016\/j.scienta.2007.07.017","article-title":"Genetic structure of mulberry from different ecotypes revealed by ISSRs in China: An implications for conservation of local mulberry varieties","volume":"115","author":"W Zhao","year":"2007","journal-title":"Sci Hortic (Amsterdam)"},{"key":"pone.0294315.ref089","first-page":"11","article-title":"Molecular characterisation of Musa L. cultivars cultivated in Malawi using microsatellite markers","author":"W Changadeya","year":"2012","journal-title":"African J Biotechnol"},{"key":"pone.0294315.ref090","first-page":"189","article-title":"Genome classification of banana genetic resources of Manipur using morphological characters","volume":"15","author":"AD Atom","year":"2015","journal-title":"Sci Vis"},{"key":"pone.0294315.ref091","doi-asserted-by":"crossref","first-page":"379","DOI":"10.1055\/s-2000-5958","article-title":"Genetic diversity and the survival of populations","volume":"2","author":"G Booy","year":"2000","journal-title":"Plant Biol"},{"key":"pone.0294315.ref092","doi-asserted-by":"crossref","first-page":"1569","DOI":"10.1002\/ece3.571","article-title":"Effects of clonality on the genetic variability of rare, insular species: The case of Ruta microcarpa from the Canary Islands","volume":"3","author":"M Meloni","year":"2013","journal-title":"Ecol Evol"},{"key":"pone.0294315.ref093","unstructured":"MusaNet. Global strategy for the conservation and use of Musa (banana) genetic resources (B.Lalibert\u00e9, Complier). International B, editor. Global Strategy for the Conservation and Use of Musa (Banana) Genetic Resources A consultative document prepared by the Global Musa Genetic Resources Network (MusaNet). Montpellier, France: MusaNet; 2016."},{"key":"pone.0294315.ref094","first-page":"1","article-title":"Plant breeding in the omics era","author":"R. Ortiz","year":"2015","journal-title":"Plant Breed Omi Era"},{"key":"pone.0294315.ref095","first-page":"1","article-title":"Biotechnologies for plant mutation breeding: Protocols","author":"J Jankowicz-Cieslak","year":"2016","journal-title":"Biotechnol Plant Mutat Breed Protoc"},{"key":"pone.0294315.ref096","doi-asserted-by":"crossref","first-page":"1644","DOI":"10.1111\/pbi.12901","article-title":"Induction and recovery of copy number variation in banana through gamma irradiation and low-coverage whole-genome sequencing","volume":"16","author":"S Datta","year":"2018","journal-title":"Plant Biotechnol J"},{"key":"pone.0294315.ref097","first-page":"5","article-title":"Genotyping\u2010by\u2010Sequencing for Plant Breeding and Genetics","author":"JA Poland","year":"2012","journal-title":"Plant Genome"},{"key":"pone.0294315.ref098","first-page":"1","article-title":"Genotyping-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding","volume":"5","author":"J He","year":"2014"},{"key":"pone.0294315.ref099","doi-asserted-by":"crossref","first-page":"1","DOI":"10.3389\/fpls.2022.953133","article-title":"Perspective for genomic-enabled prediction against black sigatoka disease and drought stress in polyploid species","volume":"13","author":"LF Mbo Nkoulou","year":"2022","journal-title":"Front Plant Sci"},{"key":"pone.0294315.ref100","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1002\/fes3.168","article-title":"Application of genetic modification and genome editing for developing climate-smart banana","volume":"8","author":"L Tripathi","year":"2019","journal-title":"Food Energy Secur"},{"key":"pone.0294315.ref101","doi-asserted-by":"crossref","first-page":"118","DOI":"10.1016\/j.pbi.2020.05.003","article-title":"CRISPR\/Cas9-based genome editing of banana for disease resistance","author":"L Tripathi","year":"2020","journal-title":"Current Opinion in Plant Biology"},{"key":"pone.0294315.ref102","doi-asserted-by":"crossref","first-page":"214","DOI":"10.2174\/1389202922666210412102214","article-title":"Engineering Resistance Against Viruses in Field Crops Using CRISPRCas9","volume":"22","author":"VR Hinge","year":"2021","journal-title":"Curr Genomics"}],"container-title":["PLOS ONE"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pone.0294315","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,11,2]],"date-time":"2024-11-02T03:21:30Z","timestamp":1730517690000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pone.0294315"}},"subtitle":[],"editor":[{"given":"Valentine Otang","family":"Ntui","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2023,11,16]]},"references-count":102,"journal-issue":{"issue":"11","published-online":{"date-parts":[[2023,11,16]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pone.0294315","relation":{},"ISSN":["1932-6203"],"issn-type":[{"value":"1932-6203","type":"electronic"}],"subject":[],"published":{"date-parts":[[2023,11,16]]}}}