{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,25]],"date-time":"2026-01-25T03:54:12Z","timestamp":1769313252811,"version":"3.49.0"},"reference-count":43,"publisher":"Public Library of Science (PLoS)","issue":"6","license":[{"start":{"date-parts":[[2016,6,7]],"date-time":"2016-06-07T00:00:00Z","timestamp":1465257600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100007197","name":"U.S. Public Health Service","doi-asserted-by":"publisher","award":["Award 2 RO1 AI457838-15"],"award-info":[{"award-number":["Award 2 RO1 AI457838-15"]}],"id":[{"id":"10.13039\/100007197","id-type":"DOI","asserted-by":"publisher"}]},{"name":"RB Roberts Bacterial Antibiotic Resistance Group"}],"content-domain":{"domain":["www.plosone.org"],"crossmark-restriction":false},"short-container-title":["PLoS ONE"],"DOI":"10.1371\/journal.pone.0156924","type":"journal-article","created":{"date-parts":[[2016,6,7]],"date-time":"2016-06-07T17:31:25Z","timestamp":1465320685000},"page":"e0156924","update-policy":"https:\/\/doi.org\/10.1371\/journal.pone.corrections_policy","source":"Crossref","is-referenced-by-count":33,"title":["MRSA Causing Infections in Hospitals in Greater Metropolitan New York: Major Shift in the Dominant Clonal Type between 1996 and 2014"],"prefix":"10.1371","volume":"11","author":[{"given":"Maria","family":"Pardos de la Gandara","sequence":"first","affiliation":[]},{"given":"Marie","family":"Curry","sequence":"additional","affiliation":[]},{"given":"Judith","family":"Berger","sequence":"additional","affiliation":[]},{"given":"David","family":"Burstein","sequence":"additional","affiliation":[]},{"given":"Phyllis","family":"Della-Latta","sequence":"additional","affiliation":[]},{"given":"Virgina","family":"Kopetz","sequence":"additional","affiliation":[]},{"given":"John","family":"Quale","sequence":"additional","affiliation":[]},{"given":"Eric","family":"Spitzer","sequence":"additional","affiliation":[]},{"given":"Rexie","family":"Tan","sequence":"additional","affiliation":[]},{"given":"Carl","family":"Urban","sequence":"additional","affiliation":[]},{"given":"Guiqing","family":"Wang","sequence":"additional","affiliation":[]},{"given":"Susan","family":"Whittier","sequence":"additional","affiliation":[]},{"given":"Herminia","family":"de Lencastre","sequence":"additional","affiliation":[]},{"given":"Alexander","family":"Tomasz","sequence":"additional","affiliation":[]}],"member":"340","published-online":{"date-parts":[[2016,6,7]]},"reference":[{"key":"ref1","doi-asserted-by":"crossref","first-page":"874","DOI":"10.1016\/S0140-6736(06)68853-3","article-title":"Emergence and resurgence of meticillin-resistant <italic>Staphylococcus aureus<\/italic> as a public-health threat","volume":"368","author":"H Grundmann","year":"2006","journal-title":"Lancet"},{"key":"ref2","doi-asserted-by":"crossref","first-page":"164","DOI":"10.1086\/515610","article-title":"Molecular epidemiology of methicillin-resistant <italic>Staphylococcus aureus<\/italic> in 12 New York hospitals. MRSA Collaborative Study Group","volume":"178","author":"RB Roberts","year":"1998","journal-title":"J Infect Dis"},{"key":"ref3","doi-asserted-by":"crossref","first-page":"563","DOI":"10.1016\/j.meegid.2013.04.030","article-title":"Evolution of community- and healthcare-associated methicillin-resistant <italic>Staphylococcus aureus<\/italic>","volume":"21","author":"A-C Uhlemann","year":"2014","journal-title":"Infect Genet Evol"},{"key":"ref4","doi-asserted-by":"crossref","first-page":"747","DOI":"10.1016\/j.meegid.2008.07.007","article-title":"The evolution of <italic>Staphylococcus aureus<\/italic>","volume":"8","author":"RH Deurenberg","year":"2008","journal-title":"Infect Genet Evol"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"e1000215","DOI":"10.1371\/journal.pmed.1000215","article-title":"Geographic distribution of <italic>Staphylococcus aureus<\/italic> causing invasive infections in Europe: a molecular-epidemiological analysis","volume":"7","author":"H Grundmann","year":"2010","journal-title":"PLoS Med"},{"key":"ref6","doi-asserted-by":"crossref","first-page":"245","DOI":"10.1089\/mdr.2000.6.245","article-title":"Distribution of methicillin-resistant <italic>Staphylococcus aureus<\/italic> clones among health care facilities in Connecticut, New Jersey, and Pennsylvania","volume":"6","author":"RB Roberts","year":"2000","journal-title":"Microb Drug Resist"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"253","DOI":"10.1089\/mdr.2000.6.253","article-title":"Similarity of antibiotic resistance patterns and molecular typing properties of methicillin-resistant <italic>Staphylococcus aureus<\/italic> isolates widely spread in hospitals in New York City and in a hospital in Tokyo, Japan","volume":"6","author":"M Aires-de-Sousa","year":"2000","journal-title":"Microb Drug Resist"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"629","DOI":"10.1038\/nrmicro2200","article-title":"Waves of resistance: <italic>Staphylococcus aureus<\/italic> in the antibiotic era","volume":"7","author":"HF Chambers","year":"2009","journal-title":"Nat Rev Microbiol"},{"key":"ref9","doi-asserted-by":"crossref","first-page":"725","DOI":"10.1086\/666329","article-title":"Trends in hospitalization for community-associated methicillin-resistant <italic>Staphylococcus aureus<\/italic> in New York City, 1997\u20132006: data from New York State&apos;s Statewide Planning and Research Cooperative System","volume":"33","author":"AM Farr","year":"2012","journal-title":"Infect Control Hosp Epidemiol"},{"key":"ref10","doi-asserted-by":"crossref","first-page":"470","DOI":"10.1016\/j.ajic.2004.10.001","article-title":"A report from the NNIS System. National Nosocomial Infections Surveillance (NNIS) System Report, data summary from January 1992 through June 2004, issued October 2004","volume":"32","year":"2004","journal-title":"Am J Infect Control"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"2464","DOI":"10.1172\/JCI38226","article-title":"Reemergence of antibiotic-resistant <italic>Staphylococcus aureus<\/italic> in the genomics era","volume":"119","author":"FR DeLeo","year":"2009","journal-title":"J Clin Invest"},{"key":"ref12","first-page":"1","article-title":"New York State HOSPITAL-ACQUIRED INFECTION REPORTING SYSTEM 2008","year":"2009"},{"key":"ref13","first-page":"1","article-title":"New York State HOSPITAL-ACQUIRED INFECTION REPORTING SYSTEM 2013","year":"2014"},{"key":"ref14","unstructured":"Centers for Disease Control and Prevention (CDC). Ative Bacterial Core Surveillance Report, Emerging Infections Program Network, Methicillin-Resistant <italic>Staphylococcus aureus<\/italic>. 2012; 1\u20133. Available: <ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/www.cdc.gov\/abcs\/reports-findings\/survreports\/mrsa12.pdf\" xlink:type=\"simple\">http:\/\/www.cdc.gov\/abcs\/reports-findings\/survreports\/mrsa12.pdf<\/ext-link>"},{"key":"ref15","first-page":"1","article-title":"Transporting Infectious Substances Safely","author":"R Ingram","year":"2007"},{"key":"ref16","article-title":"Performance Standards for Antimicrobial Susceptibility Testing; Twenty-Third Informational Supplement. CLSI Document M100-S23","year":"2013"},{"key":"ref17","doi-asserted-by":"crossref","first-page":"619","DOI":"10.1128\/JCM.44.2.619-621.2006","article-title":"High interlaboratory reproducibility of DNA sequence-based typing of bacteria in a multicenter study","volume":"44","author":"M Aires-de-Sousa","year":"2006","journal-title":"J Clin Microbiol"},{"key":"ref18","doi-asserted-by":"crossref","first-page":"1008","DOI":"10.1128\/JCM.38.3.1008-1015.2000","article-title":"Multilocus sequence typing for characterization of methicillin-resistant and methicillin-susceptible clones of <italic>Staphylococcus aureus<\/italic>","volume":"38","author":"MC Enright","year":"2000","journal-title":"J Clin Microbiol"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"3307","DOI":"10.1128\/JB.185.11.3307-3316.2003","article-title":"How clonal is <italic>Staphylococcus aureus<\/italic>","volume":"185","author":"EJ Feil","year":"2003","journal-title":"J Bacteriol"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"189","DOI":"10.1089\/mdr.2000.6.189","article-title":"Molecular typing of methicillin-resistant <italic>Staphylococcus aureus<\/italic> by pulsed-field gel electrophoresis: comparison of results obtained in a multilaboratory effort using identical protocols and MRSA strains","volume":"6","author":"M Chung","year":"2000","journal-title":"Microb Drug Resist"},{"key":"ref21","doi-asserted-by":"crossref","first-page":"2233","DOI":"10.1128\/JCM.33.9.2233-2239.1995","article-title":"Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing","volume":"33","author":"FC Tenover","year":"1995","journal-title":"J Clin Microbiol"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"5113","DOI":"10.1128\/JCM.41.11.5113-5120.2003","article-title":"Pulsed-field gel electrophoresis typing of oxacillin-resistant <italic>Staphylococcus aureus<\/italic> isolates from the United States: establishing a national database","volume":"41","author":"LK McDougal","year":"2003","journal-title":"J Clin Microbiol"},{"key":"ref23","doi-asserted-by":"crossref","first-page":"2155","DOI":"10.1128\/AAC.46.7.2155-2161.2002","article-title":"Multiplex PCR strategy for rapid identification of structural types and variants of the <italic>mec<\/italic> element in methicillin-resistant <italic>Staphylococcus aureus<\/italic>","volume":"46","author":"DC Oliveira","year":"2002","journal-title":"Antimicrob Agents Chemother"},{"key":"ref24","doi-asserted-by":"crossref","first-page":"3374","DOI":"10.1128\/AAC.00275-07","article-title":"Update to the multiplex PCR strategy for assignment of <italic>mec<\/italic> element types in <italic>Staphylococcus aureus<\/italic>","volume":"51","author":"C Milheirico","year":"2007","journal-title":"Antimicrob Agents Chemother"},{"key":"ref25","doi-asserted-by":"crossref","first-page":"959","DOI":"10.1093\/jac\/dkn021","article-title":"<italic>CcrB<\/italic> typing tool: an online resource for staphylococci <italic>ccrB<\/italic> sequence typing","volume":"61","author":"DC Oliveira","year":"2008","journal-title":"J Antimicrob Chemother"},{"key":"ref26","doi-asserted-by":"crossref","first-page":"42","DOI":"10.1093\/jac\/dkm112","article-title":"Multiplex PCR strategy for subtyping the staphylococcal cassette chromosome <italic>mec<\/italic> type IV in methicillin-resistant <italic>Staphylococcus aureus<\/italic>: \u201cSCC<italic>mec<\/italic> IV multiplex.\u201d","volume":"60","author":"C Milheirico","year":"2007","journal-title":"J Antimicrob Chemother"},{"key":"ref27","doi-asserted-by":"crossref","first-page":"4289","DOI":"10.1128\/JCM.40.11.4289-4294.2002","article-title":"Dissemination of new methicillin-resistant <italic>Staphylococcus aureus<\/italic> clones in the community","volume":"40","author":"K Okuma","year":"2002","journal-title":"J Clin Microbiol"},{"key":"ref28","doi-asserted-by":"crossref","first-page":"1128","DOI":"10.1086\/313461","article-title":"Involvement of Panton-Valentine leukocidin-producing <italic>Staphylococcus aureus<\/italic> in primary skin infections and pneumonia","volume":"29","author":"G Lina","year":"1999","journal-title":"Clin Infect Dis"},{"key":"ref29","doi-asserted-by":"crossref","first-page":"731","DOI":"10.1016\/S0140-6736(06)68231-7","article-title":"Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant <italic>Staphylococcus aureus<\/italic>","volume":"367","author":"BA Diep","year":"2006","journal-title":"Lancet"},{"key":"ref30","doi-asserted-by":"crossref","first-page":"1523","DOI":"10.1086\/587907","article-title":"The arginine catabolic mobile element and staphylococcal chromosomal cassette <italic>mec<\/italic> linkage: convergence of virulence and resistance in the USA300 clone of methicillin-resistant <italic>Staphylococcus aureus<\/italic>","volume":"197","author":"BA Diep","year":"2008","journal-title":"J Infect Dis"},{"key":"ref31","doi-asserted-by":"crossref","first-page":"324","DOI":"10.1016\/j.ijmm.2013.02.007","article-title":"Community-associated MRSA: what makes them special?","volume":"303","author":"M Otto","year":"2013","journal-title":"Int J Med Microbiol"},{"key":"ref32","doi-asserted-by":"crossref","first-page":"5","DOI":"10.1111\/j.1574-695X.2012.00937.x","article-title":"Virulence strategies of the dominant USA300 lineage of community-associated methicillin-resistant <italic>Staphylococcus aureus<\/italic> (CA-MRSA)","volume":"65","author":"LR Thurlow","year":"2012","journal-title":"FEMS Immunol Med Microbiol"},{"key":"ref33","doi-asserted-by":"crossref","first-page":"1198","DOI":"10.1056\/NEJMoa1306801","article-title":"Multistate point-prevalence survey of health care-associated infections","volume":"370","author":"SS Magill","year":"2014","journal-title":"N Eng J Med"},{"key":"ref34","doi-asserted-by":"crossref","first-page":"211","DOI":"10.1016\/j.jhin.2011.05.013","article-title":"Trends in sources of meticillin-resistant <italic>Staphylococcus aureus<\/italic> (MRSA) bacteraemia: data from the national mandatory surveillance of MRSA bacteraemia in England, 2006\u20132009","volume":"79","author":"J Wilson","year":"2011","journal-title":"J Hosp Infect"},{"key":"ref35","first-page":"1970","article-title":"National burden of invasive methicillin-resistant <italic>Staphylococcus aureus<\/italic> infections, United States, 2011","volume":"173","author":"R Dantes","year":"2013","journal-title":"JAMA Intern Med"},{"key":"ref36","doi-asserted-by":"crossref","first-page":"e18217","DOI":"10.1371\/journal.pone.0018217","article-title":"Methicillin-susceptible <italic>Staphylococcus aureus<\/italic> as a predominantly healthcare-associated pathogen: a possible reversal of roles?","volume":"6","author":"MZ David","year":"2011","journal-title":"PLoS One"},{"key":"ref37","doi-asserted-by":"crossref","first-page":"e59960","DOI":"10.1371\/journal.pone.0059960","article-title":"Extensive dissemination of methicillin-resistant <italic>Staphylococcus aureus<\/italic> (MRSA) between the hospital and the community in a country with a high prevalence of nosocomial MRSA","volume":"8","author":"D Espadinha","year":"2013","journal-title":"PLoS One"},{"key":"ref38","doi-asserted-by":"crossref","first-page":"e17630","DOI":"10.1371\/journal.pone.0017630","article-title":"High prevalence of EMRSA-15 in Portuguese public buses: a worrisome finding","volume":"6","author":"RR Sim\u00f5es","year":"2011","journal-title":"PLoS One"},{"key":"ref39","doi-asserted-by":"crossref","first-page":"1557","DOI":"10.1016\/S0140-6736(09)61999-1","article-title":"Community-associated meticillin-resistant <italic>Staphylococcus aureus<\/italic>","volume":"375","author":"FR Deleo","year":"2010","journal-title":"Lancet"},{"key":"ref40","doi-asserted-by":"crossref","first-page":"e92760","DOI":"10.1371\/journal.pone.0092760","article-title":"Replacement of HA-MRSA by CA-MRSA Infections at an Academic Medical Center in the Midwestern United States, 2004\u20135 to 2008","volume":"9","author":"MZ David","year":"2014","journal-title":"PLoS One"},{"key":"ref41","doi-asserted-by":"crossref","first-page":"285","DOI":"10.1093\/cid\/cir034","article-title":"Clinical practice guidelines by the infectious diseases society of america for the treatment of methicillin-resistant <italic>Staphylococcus aureus<\/italic> infections in adults and children: executive summary","volume":"52","author":"C Liu","year":"2011","journal-title":"Clin Infect Dis"},{"key":"ref42","doi-asserted-by":"crossref","first-page":"12","DOI":"10.4236\/ojmm.2015.51002","article-title":"In Vitro Activities of Mupirocin, Tigecycline, Ceftaroline, Vancomycin, Linezolid and Daptomycin in Clinical Isolates of Methicillin-Resistant <italic>Staphylococcus<\/italic> by E-Test Methodology","author":"P Chadha","year":"2015","journal-title":"Open Journal of Medical Microbiology"},{"key":"ref43","doi-asserted-by":"crossref","first-page":"2648","DOI":"10.1128\/JCM.00591-15","article-title":"Molecular Types of MRSA and MSSA Strains Causing Skin and Soft Tissue Infections and Nasal Colonization\u2014Identified in Community Health Centers in New York City","author":"M Pardos de la Gandara","year":"2015","journal-title":"J Clin Microbiol"}],"container-title":["PLOS ONE"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/dx.plos.org\/10.1371\/journal.pone.0156924","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,9,21]],"date-time":"2020-09-21T20:44:20Z","timestamp":1600721060000},"score":1,"resource":{"primary":{"URL":"https:\/\/dx.plos.org\/10.1371\/journal.pone.0156924"}},"subtitle":[],"editor":[{"given":"Paul J","family":"Planet","sequence":"first","affiliation":[]}],"short-title":[],"issued":{"date-parts":[[2016,6,7]]},"references-count":43,"journal-issue":{"issue":"6","published-online":{"date-parts":[[2016,6,7]]}},"URL":"https:\/\/doi.org\/10.1371\/journal.pone.0156924","relation":{},"ISSN":["1932-6203"],"issn-type":[{"value":"1932-6203","type":"electronic"}],"subject":[],"published":{"date-parts":[[2016,6,7]]}}}