{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,16]],"date-time":"2026-10-16T13:01:22Z","timestamp":1792155682602,"version":"4.4.0"},"reference-count":57,"publisher":"JMIR Publications Inc.","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J Med Internet Res"],"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:sec sec-type=\"background\">\n                    <jats:title>Background<\/jats:title>\n                    <jats:p>Rare hematologic diseases are frequently underdiagnosed or misdiagnosed due to their clinical complexity. Whether new-generation large language models (LLMs), particularly those using chain-of-thought reasoning, can improve diagnostic accuracy remains unclear.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec sec-type=\"objective\">\n                    <jats:title>Objective<\/jats:title>\n                    <jats:p>This study aimed to evaluate the diagnostic performance of new-generation commercial LLMs in rare hematologic diseases and to determine whether the LLM output enhances physicians\u2019 diagnostic accuracy.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec sec-type=\"methods\">\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>We conducted a 2-phase study. In the retrospective phase, we evaluated 7 mainstream LLMs on 158 nonpublic real-world admission records covering 9 rare hematologic diseases, assessed diagnostic performance using top-10 accuracy and mean reciprocal rank (MRR), and evaluated ranking stability via Jaccard similarity and entropy. Spearman rank correlation was used to examine the association between physicians\u2019 diagnoses and LLM-generated outputs. In the prospective phase, 28 physicians with varying levels of experience diagnosed 5 cases each, gaining access to LLM-generated diagnoses across 3 sequential steps to assess whether LLMs can improve diagnostic accuracy.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec sec-type=\"results\">\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>In the retrospective phase, ChatGPT-o1-preview demonstrated the highest top-10 accuracy (70.3%) and MRR (0.577), and DeepSeek-R1 ranked second. Diagnostic performance was low for amyloid light-chain (AL) amyloidosis; Castleman disease; Erdheim-Chester disease; and polyneuropathy, organomegaly, endocrinopathy, monoclonal gammopathy, and skin changes (POEMS) syndrome. Interestingly, higher accuracy often correlated with lower ranking stability across most LLMs. The physician performance showed a strong correlation with both top-10 accuracy (\u03c1=0.565) and MRR (\u03c1=0.650). In the prospective phase, LLMs significantly improved the diagnostic accuracy of less-experienced physicians; no significant benefit was observed for specialists. However, when LLMs generated biased responses, physician performance often failed to improve or even declined.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec sec-type=\"conclusions\">\n                    <jats:title>Conclusions<\/jats:title>\n                    <jats:p>Without fine-tuning, new-generation commercial LLMs, particularly those with chain-of-thought reasoning, can identify diagnoses of rare hematologic diseases with high accuracy and significantly enhance the diagnostic performance of less-experienced physicians. Nevertheless, biased LLM outputs may mislead clinicians, highlighting the need for critical appraisal and cautious clinical integration with appropriate safeguard systems.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.2196\/77334","type":"journal-article","created":{"date-parts":[[2025,10,10]],"date-time":"2025-10-10T10:38:41Z","timestamp":1760092721000},"page":"e77334-e77334","source":"Crossref","is-referenced-by-count":13,"title":["Performance of Large Language Models in Diagnosing Rare Hematologic Diseases and the Impact of Their Diagnostic Outputs on Physicians: Combined Retrospective and Prospective 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