{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,28]],"date-time":"2026-02-28T00:13:37Z","timestamp":1772237617767,"version":"3.50.1"},"reference-count":43,"publisher":"JMIR Publications Inc.","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["JMIR Public Health Surveill"],"abstract":"<jats:sec>\n                    <jats:title>Background<\/jats:title>\n                    <jats:p>Contact tracing is a fundamental intervention in public health. When systematically applied, it enables the breaking of chains of transmission, which is important for controlling COVID-19 transmission. In theoretically perfect contact tracing, all new cases should occur among quarantined individuals, and an epidemic should vanish. However, the availability of resources influences the capacity to perform contact tracing. Therefore, it is necessary to estimate its effectiveness threshold. We propose that this effectiveness threshold may be indirectly estimated using the ratio of COVID-19 cases arising from quarantined high-risk contacts, where higher ratios indicate better control and, under a threshold, contact tracing may fail and other restrictions become necessary.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Objective<\/jats:title>\n                    <jats:p>This study assessed the ratio of COVID-19 cases in high-risk contacts quarantined through contact tracing and its potential use as an ancillary pandemic control indicator.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>We built a 6-compartment epidemiological model to emulate COVID-19 infection flow according to publicly available data from Portuguese authorities. Our model extended the usual susceptible-exposed-infected-recovered model by adding a compartment Q with individuals in mandated quarantine who could develop infection or return to the susceptible pool and a compartment P with individuals protected from infection because of vaccination. To model infection dynamics, data on SARS-CoV-2 infection risk (IR), time until infection, and vaccine efficacy were collected. Estimation was needed for vaccine data to reflect the timing of inoculation and booster efficacy. In total, 2 simulations were built: one adjusting for the presence and absence of variants or vaccination and another maximizing IR in quarantined individuals. Both simulations were based on a set of 100 unique parameterizations. The daily ratio of infected cases arising from high-risk contacts (q estimate) was calculated. A theoretical effectiveness threshold of contact tracing was defined for 14-day average q estimates based on the classification of COVID-19 daily cases according to the pandemic phases and was compared with the timing of population lockdowns in Portugal. A sensitivity analysis was performed to understand the relationship between different parameter values and the threshold obtained.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>An inverse relationship was found between the q estimate and daily cases in both simulations (correlations &gt;0.70). The theoretical effectiveness thresholds for both simulations attained an alert phase positive predictive value of &gt;70% and could have anticipated the need for additional measures in at least 4 days for the second and fourth lockdowns. Sensitivity analysis showed that only the IR and booster dose efficacy at inoculation significantly affected the q estimates.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusions<\/jats:title>\n                    <jats:p>We demonstrated the impact of applying an effectiveness threshold for contact tracing on decision-making. Although only theoretical thresholds could be provided, their relationship with the number of confirmed cases and the prediction of pandemic phases shows the role as an indirect indicator of the efficacy of contact tracing.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.2196\/43836","type":"journal-article","created":{"date-parts":[[2023,3,1]],"date-time":"2023-03-01T13:36:39Z","timestamp":1677677799000},"page":"e43836","source":"Crossref","is-referenced-by-count":1,"title":["COVID-19 Contact Tracing as an Indicator for Evaluating a Pandemic Situation: Simulation Study"],"prefix":"10.2196","volume":"9","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-9827-2551","authenticated-orcid":false,"given":"Manuel","family":"Marques-Cruz","sequence":"first","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3163-8694","authenticated-orcid":false,"given":"Diogo","family":"Nogueira-Leite","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1248-4631","authenticated-orcid":false,"given":"Jo\u00e3o Miguel","family":"Alves","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1788-1524","authenticated-orcid":false,"given":"Francisco","family":"Fernandes","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5987-5838","authenticated-orcid":false,"given":"Jos\u00e9 Miguel","family":"Fernandes","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6560-4513","authenticated-orcid":false,"given":"Miguel \u00c2ngelo","family":"Almeida","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4126-2723","authenticated-orcid":false,"given":"Patr\u00edcia","family":"Cunha Correia","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7298-7858","authenticated-orcid":false,"given":"Paula","family":"Perestrelo","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3764-5158","authenticated-orcid":false,"given":"Ricardo","family":"Cruz-Correia","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0881-4928","authenticated-orcid":false,"given":"Pedro","family":"Pita Barros","sequence":"additional","affiliation":[]}],"member":"1010","published-online":{"date-parts":[[2023,4,6]]},"reference":[{"key":"ref1","unstructured":"Contact tracing for COVID-19: current evidence, options for scale-up and an assessment of resources neededEuropean Centre for Disease Prevention and Control2020552022-10-25https:\/\/www.ecdc.europa.eu\/en\/publications-data\/contact- tracing-covid-19-evidence-scale-up-assessment-resources"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.2100814118"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.2196\/32468"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.2196\/27917"},{"key":"ref5","unstructured":"Norma 015\/2020 de 24\/07\/2020, COVID-19 - Rastreio de ContactosDire\u00e7\u00e3o Geral da Sa\u00fade202007242022-01-05https:\/\/www.dgs.pt\/normas-orientacoes-e-informacoes\/normas-e-circulares-normativas\/norma-n-0152020-de-24072020-pdf.aspx"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1136\/jech-2020-214051"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1016\/S1473-3099(20)30457-6"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1016\/S2214-109X(20)30074-7"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/ciaa1155"},{"key":"ref10","unstructured":"Plano nacional de prepara\u00e7\u00e3o e resposta \u00e0 doen\u00e7a por novo coronav\u00edrus (COVID-19)Dire\u00e7\u00e3o Geral da Sa\u00fade20202022-10-25https:\/\/www.dgs.pt\/documentos-e-publicacoes\/plano-nacional-de-preparacao-e-resposta-para-a-doenca-por-novo-corona virus-covid-19-pdf.aspx"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1016\/j.lanwpc.2021.100374"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1098\/rstb.2018.0365"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1016\/j.eclinm.2020.100457"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-021-82873-2"},{"key":"ref15","unstructured":"Peralta-SantosANunesBMateiro GomesBNunesCAntunesCGouveiaJCarmo GomesMFelgueiras\u00d3Linhas Vermelhas: Epidemia de infe\u00e7\u00e3o por SARS-CoV-2\/COVID-19Dire\u00e7\u00e3o Geral de Sa\u00fade, Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Escola Nacional de Sa\u00fade P\u00fablica, Faculdade de Ci\u00eancias da Universidade de Lisboa, Faculdade de Ci\u00eancias da Universidade do Porto202132022-10-20https:\/\/static.poder360.com.br\/2021\/03\/Linhas-Vermelhas-pandemia-dgs-portugal.pdf"},{"key":"ref16","unstructured":"Relat\u00f3rio de Situa\u00e7\u00e3oDire\u00e7\u00e3o Geral da Sa\u00fade20222022-10-20https:\/\/covid19.min-saude.pt\/relatorio-de-situacao\/"},{"key":"ref17","unstructured":"Dados relativos \u00e0 pandemia COVID-19 em PortugalGitHub20232022-10-25Lisbon, PortugalAssocia\u00e7\u00e3o Portuguesa de Ci\u00eancia de Dados para o Bem Social (DSSG)https:\/\/github.com\/dssg-pt\/covid19pt-data"},{"key":"ref18","unstructured":"Data on SARS-CoV-2 variants in the EU\/EEAEuropean Centre for Disease Prevention and Control20232022-09-01https:\/\/www.ecdc.europa.eu\/en\/publications-data\/data-virus-variants-covid-19-eueea"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMoa2118691"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMoa2034577"},{"key":"ref21","unstructured":"Norma 004\/2020 de 23\/03\/2020 - Abordagem das Pessoas com Suspeita ou Confirma\u00e7\u00e3o de COVID-19Dire\u00e7\u00e3o Geral da Sa\u00fade202003232022-01-05https:\/\/www.dgs.pt\/normas-orientacoes-e-informacoes\/normas-e-circulares-normativas\/norma- n-0042020-de-230320201.aspx"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1001\/jamanetworkopen.2022.28008"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1136\/bmjopen-2021-051491"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.3390\/jcm9020462"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1098\/rspa.1927.0118"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.3390\/ijerph18052667"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1186\/s40249-022-01001-y"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1016\/j.mran.2021.100161"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1016\/j.idm.2020.06.007"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.3390\/ijerph17093113"},{"key":"ref31","doi-asserted-by":"crossref","first-page":"220","DOI":"10.1163\/9789004470170_014","author":"Harris-Birtill, R","year":"2021","journal-title":"Time in Variance"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1090\/s0002-9947-2011-05340-7"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1186\/1475-925X-10-77"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.3390\/ijgi9110639"},{"key":"ref35","unstructured":"Pandemic influenza risk management: a WHO guide to inform and harmonize national and international pandemic preparedness and responseWorld Health Organization20172022-10-25https:\/\/apps.who.int\/iris\/handle\/10665\/259893"},{"key":"ref36","unstructured":"MathieuERitchieHRod\u00e9s-GuiraoLAppelCGiattinoCHasellJMacdonaldBDattaniSBeltekianDOrtiz-OspinaERoserMCoronavirus Pandemic (COVID-19)Our World in Data20202022-10-25https:\/\/ourworldindata.org\/coronavirus"},{"key":"ref37","unstructured":"Referencial escolas: controlo da transmiss\u00e3o de COVID-19 em contexto escolarDire\u00e7\u00e3o Geral de Sa\u00fade20202022-10-25https:\/\/www.portugal.gov.pt\/download-ficheiros\/ficheiro.aspx?v=%3D%3DBQAAAB%2BLCAAAAAAABAAzNDAxNg QAzLafLAUAAAA%3D"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-030-77211-6_30"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1038\/518477a"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkab417"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1093\/jamia\/ocaa141"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(22)00152-0"},{"key":"ref43","unstructured":"Marques da CruzMAlvesJMNogueira LeiteDFernandesFAlmeidaM\u00c2Simulation of COVID-19 cases arising from high-risk contactsGitHub202210262022-10-26https:\/\/github.com\/marquescruz\/covid19-contact-tracing-cases-simulation"}],"container-title":["JMIR Public Health and Surveillance"],"original-title":[],"language":"en","deposited":{"date-parts":[[2023,4,6]],"date-time":"2023-04-06T10:00:44Z","timestamp":1680775244000},"score":1,"resource":{"primary":{"URL":"https:\/\/publichealth.jmir.org\/2023\/1\/e43836"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,4,6]]},"references-count":43,"URL":"https:\/\/doi.org\/10.2196\/43836","relation":{"has-preprint":[{"id-type":"doi","id":"10.2196\/preprints.43836","asserted-by":"object"}]},"ISSN":["2369-2960"],"issn-type":[{"value":"2369-2960","type":"electronic"}],"subject":[],"published":{"date-parts":[[2023,4,6]]}}}