{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,2]],"date-time":"2026-07-02T14:49:09Z","timestamp":1783003749575,"version":"3.54.5"},"reference-count":46,"publisher":"American Veterinary Medical Association (AVMA)","issue":"4","license":[{"start":{"date-parts":[[2024,4,1]],"date-time":"2024-04-01T00:00:00Z","timestamp":1711929600000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["ajvr"],"published-print":{"date-parts":[[2024,4,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n<jats:sec id=\"sc_a1\">\n<jats:title>OBJECTIVE<\/jats:title>\n<jats:p>This study aimed to characterize the bacterial and eukaryotic microbiota of the gastrointestinal (GI) tract in domestic rabbits and to evaluate the effect of different diet characteristics, such as pelleting, extrusion, and hay supplementation.<\/jats:p>\n<\/jats:sec>\n<jats:sec id=\"sc_a2\">\n<jats:title>ANIMALS<\/jats:title>\n<jats:p>30 New Zealand White rabbits (15 male and 15 female; 6 to 7 months old) were fed 1 of 6 diets (5 rabbits per diet) for 30 days after an initial acclimation period. At the end of the trial, samples were collected from the stomach, small intestine, cecum, large intestine, and hard feces.<\/jats:p>\n<\/jats:sec>\n<jats:sec id=\"sc_a3\">\n<jats:title>METHODS<\/jats:title>\n<jats:p>The samples were analyzed using 16S rRNA and internal transcribed spacer 1 region-targeted amplicon sequencing.<\/jats:p>\n<\/jats:sec>\n<jats:sec id=\"sc_a4\">\n<jats:title>RESULTS<\/jats:title>\n<jats:p>The bacterial microbiota was distinct between the foregut and hindgut. The most abundant bacterial genera included an unclassified genus in the Bacteroidales order and <jats:italic>Alistipes. Candida<\/jats:italic> was the most abundant genus in the eukaryotic dataset. In the bacterial dataset, diet No Hay\/Pellet E was shown to have lower diversity (Shannon diversity, <jats:italic>P<\/jats:italic> &lt; .05) compared to all diet groups except for No Hay\/Pellet M. Few significant differences in alpha-diversity indexes between diet groups were detected in the eukaryotic dataset.<\/jats:p>\n<\/jats:sec>\n<jats:sec id=\"sc_a5\">\n<jats:title>CLINICAL RELEVANCE<\/jats:title>\n<jats:p>Our findings demonstrated that feeding hay had a significant effect on the beta diversity of the bacterial microbiota. Given the prevalence of gastrointestinal disease in the domestic rabbit population, furthering our understanding of what constitutes a healthy rabbit microbiota and the effects of different diets on the microbial community can help veterinarians implement better intervention strategies and allow pet owners to provide the best level of care.<\/jats:p>\n<\/jats:sec>","DOI":"10.2460\/ajvr.23.10.0234","type":"journal-article","created":{"date-parts":[[2024,2,7]],"date-time":"2024-02-07T16:31:35Z","timestamp":1707323495000},"source":"Crossref","is-referenced-by-count":2,"title":["Effects of diet on the bacterial and eukaryotic microbiota across the gastrointestinal tract of healthy rabbits (Oryctolagus cuniculus)"],"prefix":"10.2460","volume":"85","author":[{"given":"Faith M.","family":"Rahic-Seggerman","sequence":"first","affiliation":[{"name":"Department of Animal Science, Iowa State University, Ames, IA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Karen","family":"Rosenthal","sequence":"additional","affiliation":[{"name":"Veterinary Emergency Group, White Plains, NY"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Craig","family":"Miller","sequence":"additional","affiliation":[{"name":"Department of Veterinary Pathobiology, Oklahoma State University, Stillwater, OK"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cayla","family":"Iske","sequence":"additional","affiliation":[{"name":"Omaha's Henry Doorly Zoo and Aquarium, Omaha, NE"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jennifer","family":"Graham","sequence":"additional","affiliation":[{"name":"Graham Veterinary Consulting, LLC, Madison, AL"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Stephan","family":"Schmitz-Esser","sequence":"additional","affiliation":[{"name":"Department of Animal Science, Iowa State University, Ames, IA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Micah R.","family":"Kohles","sequence":"additional","affiliation":[{"name":"Oxbow Animal Health\/Compana Pet Brands, Omaha, NE"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1272","reference":[{"key":"B1","series-title":"Front Microbiol","first-page":"1","article-title":"The gut microbiome of 54 mammalian species","volume":"13","author":"de Jonge N","year":"2022","unstructured":"de Jonge N, Carlsen B, Christensen MH, Pertoldi C, Nielsen JL. The gut microbiome of 54 mammalian species. Front Microbiol. 2022;13:1\u201311. doi:10.3389\/fmicb.2022.886252"},{"issue":"1","key":"B2","series-title":"J Vet Intern Med","first-page":"9","article-title":"The gastrointestinal microbiome: a review","volume":"32","author":"Barko PC","year":"2018","unstructured":"Barko PC, McMichael MA, Swanson KS, Williams DA. The gastrointestinal microbiome: a review. J Vet Intern Med. 2018;32(1):9\u201325. doi:10.1111\/jvim.14875"},{"issue":"1","key":"B3","series-title":"Animals","first-page":"1","article-title":"Gut microbiota implications for health and welfare in farm animals: a review","volume":"12","author":"Chen S","year":"2022","unstructured":"Chen S, Luo S, Yan C. Gut microbiota implications for health and welfare in farm animals: a review. Animals. 2022;12(1):1\u201314. doi:10.3390\/ani12010093"},{"issue":"1","key":"B4","series-title":"Animals","first-page":"1","article-title":"Characterization of bacterial microbiota composition along the gastrointestinal tract in rabbits","volume":"11","author":"Cotozzolo E","year":"2020","unstructured":"Cotozzolo E, Cremonesi P, Curone G, et al. Characterization of bacterial microbiota composition along the gastrointestinal tract in rabbits. Animals. 2020;11(1):1\u201316. doi:10.3390\/ani11010031"},{"issue":"1","key":"B5","series-title":"Animals","first-page":"121","article-title":"Dietary supplementation with goji berries (Lycium barbarum) modulates the microbiota of digestive tract and caecal metabolites in rabbits","volume":"12","author":"Cremonesi P","year":"2022","unstructured":"Cremonesi P, Curone G, Biscarini F, et al. Dietary supplementation with goji berries (Lycium barbarum) modulates the microbiota of digestive tract and caecal metabolites in rabbits. Animals. 2022;12(1):121. doi:10.3390\/ANI12010121"},{"key":"B6","series-title":"Front Microbiol","first-page":"1","article-title":"Microbiome of total versus live bacteria in the gut of Rex rabbits","volume":"9","author":"Fu X","year":"2018","unstructured":"Fu X, Zeng B, Wang P, et al. Microbiome of total versus live bacteria in the gut of Rex rabbits. Front Microbiol. 2018;9:1\u201310. doi:10.3389\/fmicb.2018.00733"},{"issue":"1","key":"B7","series-title":"Semin Avian Exot Pet Med","first-page":"45","article-title":"Normal bacterial flora of the rabbit gastrointestinal tract: a clinical approach","volume":"10","author":"Fann MK","year":"2001","unstructured":"Fann MK, O'Rourke D. Normal bacterial flora of the rabbit gastrointestinal tract: a clinical approach. Semin Avian Exot Pet Med. 2001;10(1):45\u201347. doi:10.1053\/saep.2001.19794"},{"issue":"2","key":"B8","series-title":"PLoS One","first-page":"1","article-title":"Comparison of the microbial population in rabbits and guinea pigs by next generation sequencing","volume":"12","author":"Crowley EJ","year":"2017","unstructured":"Crowley EJ, King JM, Wilkinson T, et al. Comparison of the microbial population in rabbits and guinea pigs by next generation sequencing. PLoS One. 2017;12(2):1\u201314. doi:10.1371\/journal.pone.0165779"},{"key":"B9","series-title":"Front Microbiol","first-page":"1","article-title":"Rabbit microbiota changes throughout the intestinal tract","volume":"9","author":"Velasco-Galilea M","year":"2018","unstructured":"Velasco-Galilea M, Piles M, Vi\u00f1as M, et al. Rabbit microbiota changes throughout the intestinal tract. Front Microbiol. 2018;9:1\u201314. doi:10.3389\/fmicb.2018.02144"},{"issue":"1","key":"B10","series-title":"BMC Microbiol","first-page":"1","article-title":"Rabbit microbiota across the whole body revealed by 16S rRNA gene amplicon sequencing","volume":"21","author":"Hu X","year":"2021","unstructured":"Hu X, Wang F, Yang S, et al. Rabbit microbiota across the whole body revealed by 16S rRNA gene amplicon sequencing. BMC Microbiol. 2021;21(1):1\u201316. doi:10.1186\/s12866-021-02377-x"},{"issue":"3","key":"B11","series-title":"FEMS Microbiol Ecol","first-page":"620","article-title":"Potential core species and satellite species in the bacterial community within the rabbit caecum","volume":"66","author":"Monteils V","year":"2008","unstructured":"Monteils V, Cauquil L, Combes S, Godon JJ, Gidenne T. Potential core species and satellite species in the bacterial community within the rabbit caecum. FEMS Microbiol Ecol. 2008;66(3):620\u2013629. doi:10.1111\/j.1574-6941.2008.00611.x"},{"issue":"3","key":"B12","series-title":"mSystems","first-page":"e0024322","article-title":"Early introduction of plant polysaccharides drives the establishment of rabbit gut bacterial ecosystems and the acquisition of microbial functions","volume":"7","author":"Pa\u00ebs C","year":"2022","unstructured":"Pa\u00ebs C, Gidenne T, B\u00e9bin K, et al. Early introduction of plant polysaccharides drives the establishment of rabbit gut bacterial ecosystems and the acquisition of microbial functions. mSystems. 2022;7(3):e0024322. doi:10.1128\/msystems.00243-22"},{"issue":"2","key":"B13","series-title":"J Anim Sci","first-page":"652","article-title":"Coprophagous behavior of rabbit pups affects implantation of cecal microbiota and health status","volume":"92","author":"Combes S","year":"2014","unstructured":"Combes S, Gidenne T, Cauquil L, Bouchez O, Fortun-Lamothe L. Coprophagous behavior of rabbit pups affects implantation of cecal microbiota and health status. J Anim Sci. 2014;92(2):652\u2013665. doi:10.2527\/jas.2013-6394"},{"issue":"3","key":"B14","series-title":"Anaerobe","first-page":"344","article-title":"Biodiversity and fermentative activity of caecal microbial communities in wild and farm rabbits from Spain","volume":"18","author":"Abecia L","year":"2012","unstructured":"Abecia L, Rodr\u00edguez-Romero N, Ya\u00f1ez-Ruiz DR, Fondevila M. Biodiversity and fermentative activity of caecal microbial communities in wild and farm rabbits from Spain. Anaerobe. 2012;18(3):344\u2013349. doi:10.1016\/j.anaerobe.2012.04.004"},{"issue":"6","key":"B15","series-title":"Anaerobe","first-page":"602","article-title":"Bacterial profile from caecal contents and soft faeces in growing rabbits given diets differing in soluble and insoluble fibre levels","volume":"18","author":"Rodr\u00edguez-Romero N","year":"2012","unstructured":"Rodr\u00edguez-Romero N, Abecia L, Fondevila M. Bacterial profile from caecal contents and soft faeces in growing rabbits given diets differing in soluble and insoluble fibre levels. Anaerobe. 2012;18(6):602\u2013607. doi:10.1016\/j.anaerobe.2012.10.006"},{"issue":"2","key":"B16","series-title":"Vet Clin North Am Exot Anim Pract","first-page":"165","article-title":"Gastrointestinal anatomy and physiology of select exotic companion mammals","volume":"17","author":"Kohles M","year":"2014","unstructured":"Kohles M. Gastrointestinal anatomy and physiology of select exotic companion mammals. Vet Clin North Am Exot Anim Pract. 2014;17(2):165\u2013178. doi:10.1016\/j.cvex.2014.01.010"},{"key":"B17","series-title":"Ferrets, Rabbits, and Rodents","first-page":"174","article-title":"Gastrointestinal diseases of rabbits","volume":"Vol 21","author":"Oglesbee BL","year":"2020","unstructured":"Oglesbee BL, Lord B. Gastrointestinal diseases of rabbits. In: Ferrets, Rabbits, and Rodents. Vol 21. Elsevier; 2020:174\u2013187. doi:10.1016\/B978-0-323-48435-0.00014-9"},{"issue":"6","key":"B18","series-title":"Lab Anim Sci","first-page":"757","article-title":"Microbial dysbiosis in rabbit mucoid enteropathy","volume":"37","author":"Lelkes L","year":"1987","unstructured":"Lelkes L, Chang CL. Microbial dysbiosis in rabbit mucoid enteropathy. Lab Anim Sci. 1987;37(6):757\u2013764."},{"issue":"8","key":"B19","series-title":"PLoS One","first-page":"e105707","article-title":"Changes in cecal microbiota and mucosal gene expression revealed new aspects of epizootic rabbit enteropathy","volume":"9","author":"B\u00e4uerl C","year":"2014","unstructured":"B\u00e4uerl C, Collado MC, Z\u00fa\u00f1iga M, Blas E, Mart\u00ednez GP. Changes in cecal microbiota and mucosal gene expression revealed new aspects of epizootic rabbit enteropathy. PLoS One. 2014;9(8):e105707. doi:10.1371\/journal.pone.0105707"},{"key":"B20","series-title":"Nutrition of the Rabbit","first-page":"17","article-title":"Digestion of starch and sugars","author":"Blas E","year":"2020","unstructured":"Blas E, Gidenne T, Blas E, Gidenne T, Carlos DB, Julian W. Digestion of starch and sugars. In: Nutrition of the Rabbit. CAB International; 2020:17\u201338."},{"issue":"8","key":"B21","series-title":"Nat Biotechnol","first-page":"852","article-title":"Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2","volume":"37","author":"Bolyen E","year":"2019","unstructured":"Bolyen E, Rideout JR, Dillon MR, et al. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nat Biotechnol. 2019;37(8):852\u2013857. doi:10.1038\/s41587-019-0209-9"},{"issue":"23","key":"B22","series-title":"Appl Environ Microbiol","first-page":"7537","article-title":"Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities","volume":"75","author":"Schloss PD","year":"2009","unstructured":"Schloss PD, Westcott SL, Ryabin T, et al. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol. 2009;75(23):7537\u20137541. doi:10.1128\/AEM.01541-09"},{"issue":"D1","key":"B23","series-title":"Nucleic Acids Res","first-page":"590","article-title":"The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools","volume":"41","author":"Quast C","year":"2013","unstructured":"Quast C, Pruesse E, Yilmaz P, et al. The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools. Nucleic Acids Res. 2013;41(D1):590\u2013596. doi:10.1093\/nar\/gks1219"},{"issue":"4","key":"B24","series-title":"PLoS One","first-page":"e61217","article-title":"Phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data","volume":"8","author":"McMurdie PJ","year":"2013","unstructured":"McMurdie PJ, Holmes S. Phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data. PLoS One. 2013;8(4):e61217. doi:10.1371\/journal.pone.0061217"},{"key":"B25","author":"Oksanen J","year":"2022","unstructured":"Oksanen J. vegan: Community Ecology Package. The R Foundation; 2022. https:\/\/cran.r-project.org\/package=vegan"},{"key":"B26","series-title":"ggplot2: Elegant Graphics for Data Analysis","author":"Wickham H","year":"2016","unstructured":"Wickham H. ggplot2: Elegant Graphics for Data Analysis. Springer-Verlag; 2016."},{"issue":"W1","key":"B27","series-title":"Nucleic Acids Res","first-page":"W395","article-title":"The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update","volume":"48","author":"Jalili V","year":"2021","unstructured":"Jalili V, Afgan E, Gu Q, et al. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update. Nucleic Acids Res. 2021;48(W1):W395\u2013W402. doi:10.1093\/NAR\/GKAA434"},{"issue":"D1","key":"B28","series-title":"Nucleic Acids Res","first-page":"D259","article-title":"The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications","volume":"47","author":"Nilsson RH","year":"2019","unstructured":"Nilsson RH, Larsson KH, Taylor AFS, et al. The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications. Nucleic Acids Res. 2019;47(D1):D259\u2013D264. doi:10.1093\/nar\/gky1022"},{"key":"B29","author":"Martinez Arbizu P","year":"2020","unstructured":"Martinez Arbizu P. pairwiseAdonis: Pairwise Multilevel Comparison using Adonis. R Package. Version 0.4. The R Foundation; 2020."},{"key":"B30","first-page":"5366","year":"2011","unstructured":"The MIXED procedure. SAS\/STAT 93 user's guide. SAS Institute Inc; 2011:5366\u20135584."},{"issue":"293","key":"B31","series-title":"J Am Stat Assoc","first-page":"52","article-title":"Multiple comparisons among means","volume":"56","author":"Dunn OJ","year":"1961","unstructured":"Dunn OJ. Multiple comparisons among means. J Am Stat Assoc. 1961;56(293):52\u201364. doi:10.1080\/01621459.1961.10482090"},{"key":"B32","series-title":"Front Microbiol","first-page":"1","article-title":"Comparison of methods for picking the operational taxonomic units from amplicon sequences","volume":"12","author":"Wei ZG","year":"2021","unstructured":"Wei ZG, Zhang XD, Cao M, Liu F, Qian Y, Zhang SW. Comparison of methods for picking the operational taxonomic units from amplicon sequences. Front Microbiol. 2021;12:1\u201316. doi:10.3389\/fmicb.2021.644012"},{"issue":"2","key":"B33","series-title":"Anim Nutr","first-page":"151","article-title":"Effects of raw material extrusion and steam conditioning on feed pellet quality and nutrient digestibility of growing meat rabbits","volume":"3","author":"Liao K","year":"2017","unstructured":"Liao K, Cai J, Shi Z, Tian G, Yan D, Chen D. Effects of raw material extrusion and steam conditioning on feed pellet quality and nutrient digestibility of growing meat rabbits. Anim Nutr. 2017;3(2):151\u2013155. doi:10.1016\/j.aninu.2017.03.006"},{"issue":"12","key":"B34","series-title":"Animals","first-page":"1","article-title":"The effect of feed form on diet digestibility and cecal parameters in rabbits","volume":"7","author":"Alvarenga IC","year":"2017","unstructured":"Alvarenga IC, Aldrich CG, Kohles M. The effect of feed form on diet digestibility and cecal parameters in rabbits. Animals. 2017;7(12):1\u201312. doi:10.3390\/ani7120095"},{"issue":"5","key":"B35","series-title":"J Anim Physiol Anim Nutr (Berl)","first-page":"991","article-title":"Food and water intake and selective feeding in rabbits on four feeding regimes","volume":"98","author":"Prebble JL","year":"2014","unstructured":"Prebble JL, Meredith AL. Food and water intake and selective feeding in rabbits on four feeding regimes. J Anim Physiol Anim Nutr (Berl). 2014;98(5):991\u20131000. doi:10.1111\/jpn.12163"},{"issue":"3","key":"B36","series-title":"J Small Anim Pract","first-page":"139","article-title":"Impact of diet on faecal output and caecotroph consumption in rabbits","volume":"58","author":"Meredith AL","year":"2017","unstructured":"Meredith AL, Prebble JL. Impact of diet on faecal output and caecotroph consumption in rabbits. J Small Anim Pract. 2017;58(3):139\u2013145. doi:10.1111\/jsap.12620"},{"key":"B37","series-title":"Ferrets, Rabbits, and Rodents","volume":"Vol 4","author":"Quesenberry KE","year":"2021","unstructured":"Quesenberry KE, Orcutt CJ, Mans C, Carpenter JW. Ferrets, Rabbits, and Rodents. 4th ed. Vol 4. Elsevier; 2021."},{"issue":"3","key":"B38","series-title":"Anim Sci","first-page":"389","article-title":"Impact of replacing starch by digestible fibre, at two levels of lignocellulose, on digestion, growth and digestive health of the rabbit","volume":"78","author":"Gidenne T","year":"2004","unstructured":"Gidenne T, Mirabito L, Jehl N, et al. Impact of replacing starch by digestible fibre, at two levels of lignocellulose, on digestion, growth and digestive health of the rabbit. Anim Sci. 2004;78(3):389\u2013398. doi:10.1017\/s1357729800058793"},{"issue":"5","key":"B39","series-title":"Anim Res","first-page":"401","article-title":"Impact of fibre deficiency and sanitary status on non-specific enteropathy of the growing rabbit","volume":"50","author":"Bennegadi N","year":"2001","unstructured":"Bennegadi N, Gidenne T, Licois D. Impact of fibre deficiency and sanitary status on non-specific enteropathy of the growing rabbit. Anim Res. 2001;50(5):401\u2013413. doi:10.1051\/animres:2001135"},{"issue":"23","key":"B40","series-title":"Vet Rec","first-page":"567","article-title":"Calcium deficiency, diet and dental disease in pet rabbits","volume":"139","author":"Harcourt-Brown FM","year":"1996","unstructured":"Harcourt-Brown FM. Calcium deficiency, diet and dental disease in pet rabbits. Vet Rec. 1996;139(23):567\u2013571."},{"key":"B41","series-title":"PeerJ","first-page":"e4100","article-title":"Impacts of diarrhea on the immune system, intestinal environment, and expression of PGRPs in New Zealand rabbits","volume":"5","author":"Chen Y","year":"2017","unstructured":"Chen Y, Zhao B, Wu Y, et al. Impacts of diarrhea on the immune system, intestinal environment, and expression of PGRPs in New Zealand rabbits. PeerJ. 2017;5:e4100. doi:10.7717\/peerj.4100"},{"issue":"10","key":"B42","series-title":"United European Gastroenterol J","first-page":"1496","article-title":"Fecal SCFAs and SCFA-producing bacteria in gut microbiome of human NAFLD as a putative link to systemic T-cell activation and advanced disease","volume":"6","author":"Rau M","year":"2018","unstructured":"Rau M, Rehman A, Dittrich M, et al. Fecal SCFAs and SCFA-producing bacteria in gut microbiome of human NAFLD as a putative link to systemic T-cell activation and advanced disease. United European Gastroenterol J. 2018;6(10):1496\u20131507. doi:10.1177\/2050640618804444"},{"issue":"7","key":"B43","series-title":"FEMS Yeast Res","first-page":"1","article-title":"Candida albicans commensalism in the gastrointestinal tract","volume":"15","author":"Neville BA","year":"2015","unstructured":"Neville BA, d'Enfert C, Bougnoux ME. Candida albicans commensalism in the gastrointestinal tract. FEMS Yeast Res. 2015;15(7):1\u201313. doi:10.1093\/femsyr\/fov081"},{"issue":"1","key":"B44","series-title":"Anim Microbiome","first-page":"70","article-title":"Equine grass sickness (a multiple systems neuropathy) is associated with alterations in the gastrointestinal mycobiome","volume":"3","author":"McGorum BC","year":"2021","unstructured":"McGorum BC, Chen Z, Glendinning L, et al. Equine grass sickness (a multiple systems neuropathy) is associated with alterations in the gastrointestinal mycobiome. Anim Microbiome. 2021;3(1):70. doi:10.1186\/s42523-021-00131-2"},{"key":"B45","series-title":"Vet Med Int","first-page":"1","article-title":"Characterization of the fungal microbiome (mycobiome) in fecal samples from dogs","volume":"2013","author":"Foster ML","year":"2013","unstructured":"Foster ML, Dowd SE, Stephenson C, Steiner JM, Suchodolski JS. Characterization of the fungal microbiome (mycobiome) in fecal samples from dogs. Vet Med Int. 2013;2013:1\u20138. doi:10.1155\/2013\/658373"},{"issue":"6","key":"B46","series-title":"Gut","first-page":"833","article-title":"Bacterial and fungal microbiota in relation to probiotic therapy (VSL#3) in pouchitis","volume":"55","author":"K\u00fchbacher T","year":"2006","unstructured":"K\u00fchbacher T, Ott SJ, Helwig U, et al. Bacterial and fungal microbiota in relation to probiotic therapy (VSL#3) in pouchitis. Gut. 2006;55(6):833\u2013841. doi:10.1136\/gut.2005.078303"}],"container-title":["American Journal of Veterinary Research"],"original-title":[],"link":[{"URL":"https:\/\/avmajournals.avma.org\/view\/journals\/ajvr\/85\/4\/ajvr.23.10.0234.xml","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/avmajournals.avma.org\/downloadpdf\/journals\/ajvr\/85\/4\/ajvr.23.10.0234.xml","content-type":"text\/html","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/avmajournals.avma.org\/downloadpdf\/journals\/ajvr\/85\/4\/ajvr.23.10.0234.xml","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,10,1]],"date-time":"2024-10-01T17:28:28Z","timestamp":1727803708000},"score":1,"resource":{"primary":{"URL":"https:\/\/avmajournals.avma.org\/view\/journals\/ajvr\/85\/4\/ajvr.23.10.0234.xml"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,4,1]]},"references-count":46,"journal-issue":{"issue":"4"},"URL":"https:\/\/doi.org\/10.2460\/ajvr.23.10.0234","relation":{},"ISSN":["0002-9645","1943-5681"],"issn-type":[{"value":"0002-9645","type":"print"},{"value":"1943-5681","type":"electronic"}],"subject":[],"published":{"date-parts":[[2024,4,1]]}}}