{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,29]],"date-time":"2026-04-29T02:55:07Z","timestamp":1777431307660,"version":"3.51.4"},"reference-count":55,"publisher":"Tsinghua University Press","issue":"3","funder":[{"DOI":"10.13039\/501100012166","name":"National Key R&D Program of China","doi-asserted-by":"publisher","award":["2022ZD0116004"],"award-info":[{"award-number":["2022ZD0116004"]}],"id":[{"id":"10.13039\/501100012166","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["62106211,62376236"],"award-info":[{"award-number":["62106211,62376236"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Big Data Min. Anal."],"published-print":{"date-parts":[[2024,9]]},"DOI":"10.26599\/bdma.2024.9020011","type":"journal-article","created":{"date-parts":[[2024,8,28]],"date-time":"2024-08-28T15:09:04Z","timestamp":1724857744000},"page":"809-827","source":"Crossref","is-referenced-by-count":4,"title":["G3DC: A Gene-Graph-Guided Selective Deep Clustering Method for Single Cell RNA-seq Data"],"prefix":"10.26599","volume":"7","author":[{"given":"Shuqing","family":"He","sequence":"first","affiliation":[{"name":"University of Michigan,Department of Statistics,Ann Arbor,MI,USA,48109"}]},{"given":"Jicong","family":"Fan","sequence":"additional","affiliation":[{"name":"School of Data Science, The Chinese University of Hong Kong, Shenzhen (CUHK-Shenzhen),Shenzhen,China,518172"}]},{"given":"Tianwei","family":"Yu","sequence":"additional","affiliation":[{"name":"School of Data Science, The Chinese University of Hong Kong, Shenzhen (CUHK-Shenzhen),Shenzhen,China,518172"}]}],"member":"11138","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.5555\/2980539.2980649"},{"key":"ref2","first-page":"478","article-title":"Unsupervised deep embedding for clustering analysis","volume-title":"Proc. 33rd Int. Conf. Machine Learning","author":"Xie"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1145\/3447548.3467267"},{"issue":"1","key":"ref4","first-page":"100","article-title":"A K-means clustering algorithm","volume":"28","author":"Hartigan","year":"1979","journal-title":"J. Roy. Stat. Soc. Ser. C: Appl. Stat."},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-016-0984-y"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1037\/h0070888"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.4662"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1008625"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-017-1188-0"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1126\/science.aaa1934"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1004575"},{"key":"ref12","first-page":"720","article-title":"A simple approach to automated spectral clustering","volume-title":"Proc. 36th Int. Conf. Neural Information Processing Systems","author":"Fan"},{"key":"ref13","article-title":"Federated spectral clustering via secure similarity reconstruction","author":"Qiao","journal-title":"presented at the 37th Int. Conf. Neural Information Processing Systems"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1016\/j.neunet.2018.01.014"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1109\/34.868688"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1088\/1742-5468\/2008\/10\/P10008"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-019-41695-z"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.3192"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-017-1382-0"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1088\/1742-6596\/2129\/1\/012028"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv088"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1002\/pmic.201700232"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.4402"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty793"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkz959"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2020.604790"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-021-04028-4"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1007\/s12539-019-00357-4"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.2174\/1574893614666181120095038"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.4236"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-018-07931-2"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1109\/CVPR52688.2022.00012"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1038\/s42256-019-0037-0"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-020-15851-3"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.24963\/ijcai.2017\/243"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-022-14218-6"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM52615.2021.9669529"},{"key":"ref38","article-title":"Semi-supervised classification with graph convolutional networks","volume-title":"Proc. 5th Int. Conf. on Learning Representations","author":"Kipf"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac099"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbac018"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.2142\/biophysics.1.21"},{"issue":"86","key":"ref42","first-page":"2579","article-title":"Visualizing data using t-SNE","volume":"9","author":"van der Maaten","year":"2008","journal-title":"J. Mach. Learn. Res."},{"key":"ref43","first-page":"507","article-title":"Laplacian score for feature selection","volume-title":"Proc. 18th Int. Conf. Neural Information Processing Systems","author":"He"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bth088"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1038\/s41419-021-03856-9"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1385\/CBB:40:3:191"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1038\/s42255-022-00531-x"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbc.2021.101002"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.1038\/ni1001-907"},{"key":"ref50","doi-asserted-by":"publisher","DOI":"10.48550\/arXiv.1406.3269"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1016\/j.cmet.2016.08.020"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1016\/j.cels.2016.08.011"},{"key":"ref53","doi-asserted-by":"publisher","DOI":"10.1016\/j.cmet.2016.08.018"},{"key":"ref54","doi-asserted-by":"publisher","DOI":"10.1038\/nn.3881"},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.4042"}],"container-title":["Big Data Mining and Analytics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/8254253\/10654612\/10654682.pdf?arnumber=10654682","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,8,31]],"date-time":"2024-08-31T00:43:35Z","timestamp":1725065015000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/10654682\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,9]]},"references-count":55,"journal-issue":{"issue":"3"},"URL":"https:\/\/doi.org\/10.26599\/bdma.2024.9020011","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2023.01.15.524109","asserted-by":"object"}]},"ISSN":["2096-0654","2097-406X"],"issn-type":[{"value":"2096-0654","type":"print"},{"value":"2097-406X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2024,9]]}}}