{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,26]],"date-time":"2026-09-26T11:13:08Z","timestamp":1790421188058,"version":"4.1.0"},"reference-count":22,"publisher":"American Dairy Science Association","issue":"2","license":[{"start":{"date-parts":[[2018,2,1]],"date-time":"2018-02-01T00:00:00Z","timestamp":1517443200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2019,2,1]],"date-time":"2019-02-01T00:00:00Z","timestamp":1548979200000},"content-version":"vor","delay-in-days":365,"URL":"http:\/\/www.elsevier.com\/open-access\/userlicense\/1.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Journal of Dairy Science"],"published-print":{"date-parts":[[2018,2]]},"DOI":"10.3168\/jds.2017-12890","type":"journal-article","created":{"date-parts":[[2017,11,16]],"date-time":"2017-11-16T22:31:57Z","timestamp":1510871517000},"page":"1292-1296","source":"Crossref","is-referenced-by-count":39,"title":["Short communication: Genomic prediction using imputed whole-genome sequence variants in Brown Swiss Cattle"],"prefix":"10.3168","volume":"101","author":[{"given":"Mirjam","family":"Frischknecht","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Theodorus H.E.","family":"Meuwissen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Beat","family":"Bapst","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Franz R.","family":"Seefried","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christine","family":"Flury","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dorian","family":"Garrick","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Heidi","family":"Signer-Hasler","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christian","family":"Stricker","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anna","family":"Bieber","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ruedi","family":"Fries","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ingolf","family":"Russ","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Johann","family":"S\u00f6lkner","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alessandro","family":"Bagnato","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Birgit","family":"Gredler-Grandl","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1747","reference":[{"key":"10.3168\/jds.2017-12890_bib1","doi-asserted-by":"crossref","first-page":"122","DOI":"10.1111\/ahg.12099","article-title":"Effectiveness of shrinkage and variable selection methods for the prediction of complex human traits using data from distantly related individuals","volume":"79","author":"Berger","year":"2015","journal-title":"Ann. Hum. Genet."},{"key":"10.3168\/jds.2017-12890_bib2","doi-asserted-by":"crossref","first-page":"210","DOI":"10.1016\/j.ajhg.2009.01.005","article-title":"A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals","volume":"84","author":"Browning","year":"2009","journal-title":"Am. J. Hum. Genet."},{"key":"10.3168\/jds.2017-12890_bib3","doi-asserted-by":"crossref","first-page":"858","DOI":"10.1038\/ng.3034","article-title":"Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle","volume":"46","author":"Daetwyler","year":"2014","journal-title":"Nat. Genet."},{"key":"10.3168\/jds.2017-12890_bib4","doi-asserted-by":"crossref","first-page":"39","DOI":"10.1038\/hdy.2013.13","article-title":"Toward genomic prediction from whole-genome sequence data: Impact of sequencing design on genotype imputation and accuracy of predictions","volume":"112","author":"Druet","year":"2014","journal-title":"Heredity (Edinb.)"},{"key":"10.3168\/jds.2017-12890_bib5","series-title":"Experiences from genomic prediction using sequence data in different species. Page 103 in Book of Abstracts of the 67th Annual Meeting of the European Federation of Animal Science.","author":"Erbe","year":"2016"},{"key":"10.3168\/jds.2017-12890_bib6","series-title":"Accurate sequence imputation enables precise QTL mapping in Brown Swiss cattle. Page 104 in Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production.","author":"Frischknecht","year":"2016"},{"key":"10.3168\/jds.2017-12890_bib7","doi-asserted-by":"crossref","first-page":"782","DOI":"10.1093\/bioinformatics\/btu704","article-title":"Minimac2: Faster genotype imputation","volume":"31","author":"Fuchsberger","year":"2015","journal-title":"Bioinformatics"},{"key":"10.3168\/jds.2017-12890_bib8","doi-asserted-by":"crossref","first-page":"55","DOI":"10.1186\/1297-9686-41-55","article-title":"Deregressing estimated breeding values and weighting information for genomic regression analyses","volume":"41","author":"Garrick","year":"2009","journal-title":"Genet. Sel. Evol."},{"key":"10.3168\/jds.2017-12890_bib9","doi-asserted-by":"crossref","first-page":"e0143945","DOI":"10.1371\/journal.pone.0143945","article-title":"Rare variants in transcript and potential regulatory regions explain a small percentage of the missing heritability of complex traits in cattle","volume":"10","author":"Gonzalez-Recio","year":"2015","journal-title":"PLoS One"},{"key":"10.3168\/jds.2017-12890_bib10","series-title":"Genomic predictions in Norwegian Red Cattle: comparison of methods. Page 353 in Book of Abstracts of the 66th Annual Meeting of the European Federation of Animal Science.","author":"Iheshiulor","year":"2015"},{"key":"10.3168\/jds.2017-12890_bib11","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1186\/s12711-016-0193-1","article-title":"Within- and across-breed genomic prediction using whole-genome sequence and single nucleotide polymorphism panels","volume":"48","author":"Iheshiulor","year":"2016","journal-title":"Genet. Sel. Evol."},{"key":"10.3168\/jds.2017-12890_bib12","doi-asserted-by":"crossref","first-page":"348","DOI":"10.1038\/ng.548","article-title":"Variance component model to account for sample structure in genome-wide association studies","volume":"42","author":"Kang","year":"2010","journal-title":"Nat. Genet."},{"key":"10.3168\/jds.2017-12890_bib13","doi-asserted-by":"crossref","first-page":"122","DOI":"10.1186\/s13059-016-0974-4","article-title":"The Ensembl variant effect predictor","volume":"17","author":"McLaren","year":"2016","journal-title":"Genome Biol."},{"key":"10.3168\/jds.2017-12890_bib14","doi-asserted-by":"crossref","first-page":"623","DOI":"10.1534\/genetics.110.116590","article-title":"Accurate prediction of genetic values for complex traits by whole-genome resequencing","volume":"185","author":"Meuwissen","year":"2010","journal-title":"Genetics"},{"key":"10.3168\/jds.2017-12890_bib15","doi-asserted-by":"crossref","first-page":"24","DOI":"10.1186\/s12711-017-0301-x","article-title":"Evaluation of the accuracy of imputed sequence variants and their utility for causal variant detection in cattle","volume":"49","author":"Pausch","year":"2017","journal-title":"Genet. Sel. Evol."},{"key":"10.3168\/jds.2017-12890_bib16","first-page":"421","article-title":"FImpute\u2014An efficient imputation algorithm for dairy cattle populations","volume":"94","author":"Sargolzaei","year":"2011","journal-title":"J. Dairy Sci."},{"key":"10.3168\/jds.2017-12890_bib17","doi-asserted-by":"crossref","first-page":"41","DOI":"10.1186\/1297-9686-46-41","article-title":"Accuracy of imputation to whole-genome sequence data in Holstein Friesian cattle","volume":"46","author":"van Binsbergen","year":"2014","journal-title":"Genet. Sel. Evol."},{"key":"10.3168\/jds.2017-12890_bib18","doi-asserted-by":"crossref","first-page":"71","DOI":"10.1186\/s12711-015-0149-x","article-title":"Genomic prediction using imputed whole-genome sequence data in Holstein Friesian cattle","volume":"47","author":"van Binsbergen","year":"2015","journal-title":"Genet. Sel. Evol."},{"key":"10.3168\/jds.2017-12890_bib19","doi-asserted-by":"crossref","first-page":"32","DOI":"10.1186\/s12711-017-0307-4","article-title":"Selecting sequence variants to improve genomic predictions for dairy cattle","volume":"49","author":"VanRaden","year":"2017","journal-title":"Genet. Sel. Evol."},{"key":"10.3168\/jds.2017-12890_bib20","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1186\/s12711-016-0274-1","article-title":"Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holstein\u2013Friesian cattle","volume":"48","author":"Veerkamp","year":"2016","journal-title":"Genet. Sel. Evol."},{"key":"10.3168\/jds.2017-12890_bib21","doi-asserted-by":"crossref","first-page":"565","DOI":"10.1038\/ng.608","article-title":"Common SNPs explain a large proportion of heritability for human height","volume":"42","author":"Yang","year":"2010","journal-title":"Nat. Genet."},{"key":"10.3168\/jds.2017-12890_bib22","doi-asserted-by":"crossref","first-page":"76","DOI":"10.1016\/j.ajhg.2010.11.011","article-title":"GCTA: A tool for genome-wide complex trait analysis","volume":"88","author":"Yang","year":"2011","journal-title":"Am. J. Hum. Genet."}],"container-title":["Journal of Dairy Science"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0022030217310639?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0022030217310639?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0022030217310639","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,11,8]],"date-time":"2024-11-08T21:47:12Z","timestamp":1731102432000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0022030217310639"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,2]]},"references-count":22,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2018,2]]}},"alternative-id":["S0022030217310639"],"URL":"https:\/\/doi.org\/10.3168\/jds.2017-12890","relation":{},"ISSN":["0022-0302"],"issn-type":[{"value":"0022-0302","type":"print"}],"subject":[],"published":{"date-parts":[[2018,2]]}}}