{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,28]],"date-time":"2025-12-28T02:25:11Z","timestamp":1766888711226,"version":"3.28.0"},"reference-count":45,"publisher":"American Dairy Science Association","issue":"9","license":[{"start":{"date-parts":[[2018,9,1]],"date-time":"2018-09-01T00:00:00Z","timestamp":1535760000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2019,9,1]],"date-time":"2019-09-01T00:00:00Z","timestamp":1567296000000},"content-version":"vor","delay-in-days":365,"URL":"http:\/\/www.elsevier.com\/open-access\/userlicense\/1.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Journal of Dairy Science"],"published-print":{"date-parts":[[2018,9]]},"DOI":"10.3168\/jds.2017-14306","type":"journal-article","created":{"date-parts":[[2018,6,21]],"date-time":"2018-06-21T06:29:00Z","timestamp":1529562540000},"page":"8401-8416","source":"Crossref","is-referenced-by-count":3,"title":["A mathematical model of in vivo bovine blastocyst developmental to gestational Day 15"],"prefix":"10.3168","volume":"101","author":[{"given":"P.R.","family":"Shorten","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"M.","family":"Donnison","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"R.M.","family":"McDonald","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"S.","family":"Meier","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"A.M.","family":"Ledgard","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"D.","family":"Berg","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"1747","reference":[{"key":"10.3168\/jds.2017-14306_bib1","doi-asserted-by":"crossref","first-page":"424","DOI":"10.1002\/mrd.22640","article-title":"Differences in mRNA populations of short and long bovine conceptuses on Day 15 of gestation","volume":"83","author":"Barnwell","year":"2016","journal-title":"Mol. Reprod. Dev."},{"year":"2007","author":"Bates","series-title":"Nonlinear Regression Analysis and Its Applications","key":"10.3168\/jds.2017-14306_bib2"},{"key":"10.3168\/jds.2017-14306_bib3","doi-asserted-by":"crossref","first-page":"35","DOI":"10.1093\/ansci\/49.Supplement_II.35","article-title":"Actions of hormones on the uterus and effect on conceptus development","volume":"49","author":"Bazer","year":"1979","journal-title":"J. Anim. Sci."},{"key":"10.3168\/jds.2017-14306_bib4","doi-asserted-by":"crossref","first-page":"213","DOI":"10.1002\/cem.2609","article-title":"Partial least squares discriminant analysis: Taking the magic away","volume":"28","author":"Bereton","year":"2014","journal-title":"J. Chem."},{"key":"10.3168\/jds.2017-14306_bib5","doi-asserted-by":"crossref","first-page":"250","DOI":"10.1016\/j.theriogenology.2009.09.005","article-title":"Embryo loss in cattle between Days 7 and 16 of pregnancy","volume":"73","author":"Berg","year":"2010","journal-title":"Theriogenology"},{"key":"10.3168\/jds.2017-14306_bib6","doi-asserted-by":"crossref","first-page":"368","DOI":"10.1071\/RD07204","article-title":"Effect of increasing progesterone concentration from day 3 of pregnancy on subsequent embryo survival and development in beef heifers","volume":"20","author":"Carter","year":"2008","journal-title":"Reprod. Fertil. Dev."},{"key":"10.3168\/jds.2017-14306_bib7","doi-asserted-by":"crossref","first-page":"478","DOI":"10.1111\/1541-4337.12141","article-title":"Recent applications of spectroscopic and hyperspectral imaging techniques with chemometric analysis for rapid inspection of microbial spoilage in muscle foods","volume":"14","author":"Cheng","year":"2015","journal-title":"Compr. Rev. Food Sci. Food Saf."},{"key":"10.3168\/jds.2017-14306_bib8","doi-asserted-by":"crossref","first-page":"507","DOI":"10.1530\/REP-09-0152","article-title":"Progesterone and conceptus elongation in cattle: A direct effect on the embryo or an indirect effect via the endometrium?","volume":"138","author":"Clemente","year":"2009","journal-title":"Reproduction"},{"key":"10.3168\/jds.2017-14306_bib9","doi-asserted-by":"crossref","first-page":"260","DOI":"10.1111\/j.1439-0531.2008.01171.x","article-title":"Embryonic and early foetal losses in cattle and other ruminants","volume":"43","author":"Diskin","year":"2008","journal-title":"Reprod. Domest. Anim."},{"key":"10.3168\/jds.2017-14306_bib10","doi-asserted-by":"crossref","first-page":"266","DOI":"10.1095\/biolreprod.110.085910","article-title":"Changes in the endometrial transcriptome during the bovine estrous cycle: Effect of low circulating progesterone and consequences for conceptus elongation","volume":"84","author":"Forde","year":"2011","journal-title":"Biol. Reprod."},{"key":"10.3168\/jds.2017-14306_bib11","doi-asserted-by":"crossref","first-page":"437","DOI":"10.1530\/jrf.0.0840437","article-title":"Evidence for maternal regulation of early conceptus growth and development in beef cattle","volume":"84","author":"Garrett","year":"1988","journal-title":"J. Reprod. Fertil."},{"key":"10.3168\/jds.2017-14306_bib12","doi-asserted-by":"crossref","first-page":"551","DOI":"10.1530\/REP-10-0476","article-title":"Bovine blastocysts with developmental competence to term share similar expression of developmentally important genes although derived from different culture environments","volume":"142","author":"Ghanem","year":"2011","journal-title":"Reproduction"},{"year":"1996","author":"Gilks","series-title":"Markov chain Monte Carlo in practice","key":"10.3168\/jds.2017-14306_bib13"},{"key":"10.3168\/jds.2017-14306_bib14","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1530\/rep.0.1240289","article-title":"Evidence that absence of endometrial gland secretions in uterine gland knockout ewes compromises conceptus survival and elongation","volume":"124","author":"Gray","year":"2002","journal-title":"Reproduction"},{"key":"10.3168\/jds.2017-14306_bib15","doi-asserted-by":"crossref","first-page":"756","DOI":"10.1186\/1471-2164-15-756","article-title":"Transcriptional profiles of bovine in vivo pre-implantation development","volume":"15","author":"Jiang","year":"2014","journal-title":"BMC Genomics"},{"key":"10.3168\/jds.2017-14306_bib16","doi-asserted-by":"crossref","first-page":"932","DOI":"10.1644\/BFW-009","article-title":"Estimating timing of life history events with coarse data","volume":"85","author":"Johnson","year":"2004","journal-title":"J. Mammal."},{"key":"10.3168\/jds.2017-14306_bib17","doi-asserted-by":"crossref","first-page":"19768","DOI":"10.1073\/pnas.0805616105","article-title":"Genome-wide expression profiling reveals distinct clusters of transcriptional regulation during bovine preimplantation development in vivo","volume":"105","author":"Kues","year":"2008","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.3168\/jds.2017-14306_bib18","doi-asserted-by":"crossref","first-page":"737","DOI":"10.1071\/RD10183","article-title":"Evaluation of the uterine environment early in pregnancy establishment to characterise cows with a potentially superior ability to support conceptus survival","volume":"23","author":"Ledgard","year":"2011","journal-title":"Reprod. Fertil. Dev."},{"key":"10.3168\/jds.2017-14306_bib19","doi-asserted-by":"crossref","first-page":"48","DOI":"10.1002\/mrd.1080370107","article-title":"Effect of follicle size on bovine oocyte quality and developmental competence following maturation, fertilization, and culture in vitro","volume":"37","author":"Lonergan","year":"1994","journal-title":"Mol. Reprod. Dev."},{"key":"10.3168\/jds.2017-14306_bib20","doi-asserted-by":"crossref","first-page":"500","DOI":"10.1016\/j.tvjl.2004.12.005","article-title":"Effects of time of progesterone supplementation on embryo development and interferon-\u03c4 production in the cow","volume":"171","author":"Mann","year":"2006","journal-title":"Vet. J."},{"key":"10.3168\/jds.2017-14306_bib21","doi-asserted-by":"crossref","first-page":"E1749","DOI":"10.1073\/pnas.1721191115","article-title":"Uterine influences on conceptus development in fertility-classified animals","volume":"115","author":"Moraes","year":"2018","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.3168\/jds.2017-14306_bib22","doi-asserted-by":"crossref","first-page":"1112","DOI":"10.1017\/S1751731108002474","article-title":"Effect of progesterone on embryo survival","volume":"2","author":"Morris","year":"2008","journal-title":"Animal"},{"key":"10.3168\/jds.2017-14306_bib23","doi-asserted-by":"crossref","first-page":"627","DOI":"10.1530\/REP-17-0345","article-title":"Single-cell gene expression of the bovine blastocyst","volume":"154","author":"Negr\u00f3n-P\u00e9rez","year":"2017","journal-title":"Reproduction"},{"key":"10.3168\/jds.2017-14306_bib24","doi-asserted-by":"crossref","first-page":"531","DOI":"10.1095\/biolreprod.116.145367","article-title":"Prosurvival effect of cumulus prostaglandin G\/H synthase 2\/prostaglandin2 signaling on bovine blastocyst: Impact on in vivo posthatching development","volume":"96","author":"Nuttinck","year":"2017","journal-title":"Biol. Reprod."},{"key":"10.3168\/jds.2017-14306_bib25","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1186\/1471-213X-12-33","article-title":"Global gene expression of the inner cell mass and trophectoderm of the bovine blastocyst","volume":"12","author":"Ozawa","year":"2012","journal-title":"BMC Dev. Biol."},{"key":"10.3168\/jds.2017-14306_bib26","doi-asserted-by":"crossref","first-page":"63","DOI":"10.1002\/mrd.1080310111","article-title":"Fertilization and developmental competence of bovine oocytes derived from different categories of antral follicles","volume":"31","author":"Pavlok","year":"1992","journal-title":"Mol. Reprod. Dev."},{"key":"10.3168\/jds.2017-14306_bib27","first-page":"587","article-title":"Embryo mortality in the cow","volume":"64","author":"Peters","year":"1996","journal-title":"Anim. Breed. Abstr."},{"year":"2002","author":"Rencher","series-title":"Methods of Multivariate Analysis","key":"10.3168\/jds.2017-14306_bib28"},{"key":"10.3168\/jds.2017-14306_bib29","doi-asserted-by":"crossref","first-page":"470","DOI":"10.1002\/mrd.20431","article-title":"In vivo expression of interferon tau mRNA by the embryonic trophoblast and uterine concentrations of interferon tau protein during early pregnancy in the cow","volume":"73","author":"Robinson","year":"2006","journal-title":"Mol. Reprod. Dev."},{"key":"10.3168\/jds.2017-14306_bib30","doi-asserted-by":"crossref","first-page":"1045","DOI":"10.1071\/AN10162","article-title":"Nutrition x reproduction interaction in pasture-based systems: Is nutrition a factor in reproductive failure?","volume":"51","author":"Roche","year":"2011","journal-title":"Anim. Prod. Sci."},{"key":"10.3168\/jds.2017-14306_bib31","doi-asserted-by":"crossref","first-page":"3076","DOI":"10.3168\/jds.S0022-0302(04)73441-4","article-title":"Relationships among international body condition scoring systems","volume":"87","author":"Roche","year":"2004","journal-title":"J. Dairy Sci."},{"key":"10.3168\/jds.2017-14306_bib32","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1095\/biolreprod.106.052944","article-title":"Progesterone regulation of preimplantation conceptus growth and galectin 15 (LGALS15) in the ovine uterus","volume":"75","author":"Satterfield","year":"2006","journal-title":"Biol. Reprod."},{"key":"10.3168\/jds.2017-14306_bib33","doi-asserted-by":"crossref","first-page":"736","DOI":"10.3168\/jds.2017-12845","article-title":"A mathematical model of the interaction between bovine blastocyst developmental stage and progesterone stimulated uterine factors on differential embryonic development observed on gestational day 15","volume":"101","author":"Shorten","year":"2018","journal-title":"J. Dairy Sci."},{"key":"10.3168\/jds.2017-14306_bib34","doi-asserted-by":"crossref","first-page":"4641","DOI":"10.2527\/jas.2013-6415","article-title":"Effect of age, weight, and sire on embryo and fetal survival in sheep","volume":"91","author":"Shorten","year":"2013","journal-title":"J. Anim. Sci."},{"key":"10.3168\/jds.2017-14306_bib35","doi-asserted-by":"crossref","first-page":"62","DOI":"10.1016\/j.jtbi.2010.06.005","article-title":"A mathematical model of pregnancy recognition in mammals","volume":"266","author":"Shorten","year":"2010","journal-title":"J. Theor. Biol."},{"key":"10.3168\/jds.2017-14306_bib36","doi-asserted-by":"crossref","first-page":"1073","DOI":"10.1530\/rep.1.00967","article-title":"Gene expression profiling of individual bovine nuclear transfer blastocysts","volume":"131","author":"Somers","year":"2006","journal-title":"Reproduction"},{"key":"10.3168\/jds.2017-14306_bib37","doi-asserted-by":"crossref","first-page":"48","DOI":"10.2527\/af.2013-0033","article-title":"Early pregnancy: Concepts, challenges, and potential solutions","volume":"3","author":"Spencer","year":"2013","journal-title":"Anim. Front."},{"key":"10.3168\/jds.2017-14306_bib38","doi-asserted-by":"crossref","first-page":"65","DOI":"10.1071\/RD06102","article-title":"Pregnancy recognition and conceptus implantation in domestic ruminants: Roles of progesterone, interferons and endogenous retroviruses","volume":"19","author":"Spencer","year":"2007","journal-title":"Reprod. Fertil. Dev."},{"key":"10.3168\/jds.2017-14306_bib39","doi-asserted-by":"crossref","first-page":"2","DOI":"10.1095\/biolreprod.103.024133","article-title":"Progesterone and placental hormone actions on the uterus: Insights from domestic animals","volume":"71","author":"Spencer","year":"2004","journal-title":"Biol. Reprod."},{"key":"10.3168\/jds.2017-14306_bib40","doi-asserted-by":"crossref","first-page":"346","DOI":"10.1095\/biolreprod58.2.346","article-title":"Prostaglandin F2\u03b1 regulates distinct physiological changes in early and mid-cycle bovine corpora lutea","volume":"58","author":"Tsai","year":"1998","journal-title":"Biol. Reprod."},{"key":"10.3168\/jds.2017-14306_bib41","doi-asserted-by":"crossref","first-page":"62","DOI":"10.1071\/RD12279","article-title":"Hosting the preimplantation embryo: Potentials and limitations of different approaches for analysing embryo-endometrium interactions in cattle","volume":"25","author":"Ulbrich","year":"2012","journal-title":"Reprod. Fertil. Dev."},{"key":"10.3168\/jds.2017-14306_bib42","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1262\/jrd.20075","article-title":"Classification of morphological changes based on the number of cleavage divisions in bovine embryos","volume":"55","author":"Ushijima","year":"2009","journal-title":"J. Reprod. Dev."},{"key":"10.3168\/jds.2017-14306_bib43","doi-asserted-by":"crossref","first-page":"1041","DOI":"10.1095\/biolreprod57.5.1041","article-title":"Timing of compaction and inner cell allocation in bovine embryos produced in vivo after superovulation","volume":"57","author":"Van Soom","year":"1997","journal-title":"Biol. Reprod."},{"key":"10.3168\/jds.2017-14306_bib44","doi-asserted-by":"crossref","first-page":"109","DOI":"10.1016\/S0169-7439(01)00155-1","article-title":"PLS-regression: A basic tool of chemometrics","volume":"58","author":"Wold","year":"2001","journal-title":"Chemom. Intell. Lab. Syst."},{"key":"10.3168\/jds.2017-14306_bib45","doi-asserted-by":"crossref","first-page":"726","DOI":"10.1111\/rda.12737","article-title":"Transcriptome analyses of inner cell mass and trophectoderm cells isolated by magnetic-activated cell sorting from bovine blastocysts using single cell RNA-seq","volume":"51","author":"Zhao","year":"2016","journal-title":"Reprod. Domest. Anim."}],"container-title":["Journal of Dairy Science"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0022030218305915?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0022030218305915?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0022030218305915","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,11,8]],"date-time":"2024-11-08T21:19:01Z","timestamp":1731100741000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0022030218305915"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,9]]},"references-count":45,"journal-issue":{"issue":"9","published-print":{"date-parts":[[2018,9]]}},"alternative-id":["S0022030218305915"],"URL":"https:\/\/doi.org\/10.3168\/jds.2017-14306","relation":{},"ISSN":["0022-0302"],"issn-type":[{"type":"print","value":"0022-0302"}],"subject":[],"published":{"date-parts":[[2018,9]]}}}