{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,24]],"date-time":"2026-10-24T19:57:15Z","timestamp":1792871835538,"version":"4.5.0"},"reference-count":37,"publisher":"Centers for Disease Control and Prevention (CDC)","issue":"5","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Emerg. Infect. Dis."],"published-print":{"date-parts":[[2020,5]]},"DOI":"10.3201\/eid2605.191045","type":"journal-article","created":{"date-parts":[[2020,4,15]],"date-time":"2020-04-15T18:38:48Z","timestamp":1586975928000},"page":"937-944","source":"Crossref","is-referenced-by-count":16,"title":["<i>Rhizopus microsporus<\/i> Infections Associated with Surgical Procedures, Argentina, 2006\u20132014"],"prefix":"10.3201","volume":"26","author":[{"given":"Jolene R.","family":"Bowers","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Juan","family":"Monroy-Nieto","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lalitha","family":"Gade","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jason","family":"Travis","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nicol\u00e1s","family":"Refojo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ruben","family":"Abrantes","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jorge","family":"Santander","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chris","family":"French","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mar\u00eda Cecilia","family":"Dignani","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alejandra Ines","family":"Hevia","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chandler C.","family":"Roe","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Darrin","family":"Lemmer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shawn R.","family":"Lockhart","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tom","family":"Chiller","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anastasia P.","family":"Litvintseva","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Liliana","family":"Clara","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"David M.","family":"Engelthaler","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1822","reference":[{"key":"key-10.3201\/eid2605.191045-202004151438-R1","article-title":"The epidemiology and clinical manifestations of mucormycosis: a systematic review and meta-analysis of case reports.","author":"Jeong","year":"2018","journal-title":"Clin Microbiol Infect"},{"key":"key-10.3201\/eid2605.191045-202004151438-R2","doi-asserted-by":"publisher","first-page":"S23","DOI":"10.1093\/cid\/cir866","article-title":"Epidemiology and clinical manifestations of mucormycosis.","volume":"54","author":"Petrikkos","year":"2012","journal-title":"Clin Infect Dis"},{"key":"key-10.3201\/eid2605.191045-202004151438-R3","doi-asserted-by":"publisher","first-page":"2214","DOI":"10.1056\/NEJMoa1204781","article-title":"Necrotizing cutaneous mucormycosis after a tornado in Joplin, Missouri, in 2011.","volume":"367","author":"Neblett Fanfair","year":"2012","journal-title":"N Engl J Med"},{"key":"key-10.3201\/eid2605.191045-202004151438-R4","doi-asserted-by":"publisher","first-page":"2007","DOI":"10.1534\/g3.118.200235","article-title":"Phylogenetic and phylogenomic definition of Rhizopus species.","volume":"8","author":"Gryganskyi","year":"2018","journal-title":"G3 (Bethesda)"},{"key":"key-10.3201\/eid2605.191045-202004151438-R5","doi-asserted-by":"crossref","unstructured":"Slavin M, van Hal S, Sorrell TC, Lee A, Marriott DJ, Daveson K,  Invasive infections due to filamentous fungi other than Aspergillus: epidemiology and determinants of mortality. Clin Microbiol Infect. 2015;21:490 e1\u201310.","DOI":"10.1016\/j.cmi.2014.12.021"},{"key":"key-10.3201\/eid2605.191045-202004151438-R6","doi-asserted-by":"publisher","first-page":"2420","DOI":"10.1007\/s11999-009-0714-0","article-title":"Massive bone loss from fungal infection after anterior cruciate ligament arthroscopic reconstruction.","volume":"467","author":"Muscolo","year":"2009","journal-title":"Clin Orthop Relat Res"},{"key":"key-10.3201\/eid2605.191045-202004151438-R7","doi-asserted-by":"publisher","first-page":"617","DOI":"10.1016\/j.mycmed.2018.09.002","article-title":"Mucormycosis outbreak due to Rhizopus microsporus after arthroscopic anterior cruciate ligament reconstruction surgery evaluated by RAPD and MALDI-TOF Mass spectrometry.","volume":"28","author":"Gamarra","year":"2018","journal-title":"J Mycol Med"},{"key":"key-10.3201\/eid2605.191045-202004151438-R8","first-page":"92","article-title":"Osteomielitis por mucorales (OMM) asociada a artroscop\u00eda de reparaci\u00f3n de ligamento cruzado anterior: investigaci\u00f3n epidemiol\u00f3gica y recomendaciones para su prevenci\u00f3n.","volume":"25","author":"Dignani","year":"2018","journal-title":"Artroscopia."},{"key":"key-10.3201\/eid2605.191045-202004151438-R9","doi-asserted-by":"publisher","first-page":"e00176","DOI":"10.1128\/genomeA.00176-18","article-title":"Genome sequence of a multidrug-resistant Candida haemulonii isolate from a patient with chronic leg ulcers in Israel.","volume":"6","author":"Chow","year":"2018","journal-title":"Genome Announc"},{"key":"key-10.3201\/eid2605.191045-202004151438-R10","doi-asserted-by":"publisher","first-page":"455","DOI":"10.1089\/cmb.2012.0021","article-title":"SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.","volume":"19","author":"Bankevich","year":"2012","journal-title":"J Comput Biol"},{"key":"key-10.3201\/eid2605.191045-202004151438-R11","doi-asserted-by":"publisher","first-page":"722","DOI":"10.1101\/gr.215087.116","article-title":"Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.","volume":"27","author":"Koren","year":"2017","journal-title":"Genome Res"},{"key":"key-10.3201\/eid2605.191045-202004151438-R12","doi-asserted-by":"publisher","first-page":"e112963","DOI":"10.1371\/journal.pone.0112963","article-title":"Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.","volume":"9","author":"Walker","year":"2014","journal-title":"PLoS One"},{"key":"key-10.3201\/eid2605.191045-202004151438-R13","doi-asserted-by":"publisher","first-page":"e000074","DOI":"10.1099\/mgen.0.000074","article-title":"NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats.","volume":"2","author":"Sahl","year":"2016","journal-title":"Microb Genom"},{"key":"key-10.3201\/eid2605.191045-202004151438-R14","doi-asserted-by":"publisher","first-page":"1754","DOI":"10.1093\/bioinformatics\/btp324","article-title":"Fast and accurate short read alignment with Burrows-Wheeler transform.","volume":"25","author":"Li","year":"2009","journal-title":"Bioinformatics"},{"key":"key-10.3201\/eid2605.191045-202004151438-R15","doi-asserted-by":"publisher","first-page":"1297","DOI":"10.1101\/gr.107524.110","article-title":"The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.","volume":"20","author":"McKenna","year":"2010","journal-title":"Genome Res"},{"key":"key-10.3201\/eid2605.191045-202004151438-R16","doi-asserted-by":"publisher","first-page":"2478","DOI":"10.1093\/nar\/30.11.2478","article-title":"Fast algorithms for large-scale genome alignment and comparison.","volume":"30","author":"Delcher","year":"2002","journal-title":"Nucleic Acids Res"},{"key":"key-10.3201\/eid2605.191045-202004151438-R17","doi-asserted-by":"publisher","first-page":"268","DOI":"10.1093\/molbev\/msu300","article-title":"IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.","volume":"32","author":"Nguyen","year":"2015","journal-title":"Mol Biol Evol"},{"key":"key-10.3201\/eid2605.191045-202004151438-R18","doi-asserted-by":"publisher","first-page":"2725","DOI":"10.1093\/molbev\/mst197","article-title":"MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.","volume":"30","author":"Tamura","year":"2013","journal-title":"Mol Biol Evol"},{"key":"key-10.3201\/eid2605.191045-202004151438-R19","doi-asserted-by":"publisher","first-page":"W475-8","DOI":"10.1093\/nar\/gkr201","article-title":"Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy.","volume":"39","author":"Letunic","year":"2011","journal-title":"Nucleic Acids Res"},{"key":"key-10.3201\/eid2605.191045-202004151438-R20","doi-asserted-by":"publisher","first-page":"2665","DOI":"10.1534\/genetics.105.048975","article-title":"A simple and robust statistical test for detecting the presence of recombination.","volume":"172","author":"Bruen","year":"2006","journal-title":"Genetics"},{"key":"key-10.3201\/eid2605.191045-202004151438-R21","doi-asserted-by":"publisher","first-page":"2387","DOI":"10.1271\/bbb.60101","article-title":"The molecular phylogeny of the genus Rhizopus based on rDNA sequences.","volume":"70","author":"Abe","year":"2006","journal-title":"Biosci Biotechnol Biochem"},{"key":"key-10.3201\/eid2605.191045-202004151438-R22","doi-asserted-by":"publisher","first-page":"1325","DOI":"10.1271\/bbb.90718","article-title":"A molecular phylogeny-based taxonomy of the genus Rhizopus.","volume":"74","author":"Abe","year":"2010","journal-title":"Biosci Biotechnol Biochem"},{"key":"key-10.3201\/eid2605.191045-202004151438-R23","doi-asserted-by":"publisher","first-page":"196","DOI":"10.1016\/j.mycres.2006.10.003","article-title":"Polyphasic approach to the taxonomy of the Rhizopus stolonifer group.","volume":"111","author":"Liou","year":"2007","journal-title":"Mycol Res"},{"key":"key-10.3201\/eid2605.191045-202004151438-R24","doi-asserted-by":"publisher","first-page":"884","DOI":"10.1038\/nature03997","article-title":"Pathogenic fungus harbours endosymbiotic bacteria for toxin production.","volume":"437","author":"Partida-Martinez","year":"2005","journal-title":"Nature"},{"key":"key-10.3201\/eid2605.191045-202004151438-R25","doi-asserted-by":"publisher","first-page":"227","DOI":"10.3201\/eid1702.100620","article-title":"Next-generation sequencing of Coccidioides immitis isolated during cluster investigation.","volume":"17","author":"Engelthaler","year":"2011","journal-title":"Emerg Infect Dis"},{"key":"key-10.3201\/eid2605.191045-202004151438-R26","doi-asserted-by":"publisher","first-page":"476","DOI":"10.3201\/eid2203.151193","article-title":"Whole-genome sequencing to determine origin of multinational outbreak of Sarocladium kiliense bloodstream infections.","volume":"22","author":"Etienne","year":"2016","journal-title":"Emerg Infect Dis"},{"key":"key-10.3201\/eid2605.191045-202004151438-R27","doi-asserted-by":"publisher","first-page":"3216","DOI":"10.1128\/JCM.00936-14","article-title":"Whole-genome analysis of Exserohilum rostratum from an outbreak of fungal meningitis and other infections.","volume":"52","author":"Litvintseva","year":"2014","journal-title":"J Clin Microbiol"},{"key":"key-10.3201\/eid2605.191045-202004151438-R28","doi-asserted-by":"publisher","first-page":"2654","DOI":"10.1128\/JCM.01000-13","article-title":"Preliminary laboratory report of fungal infections associated with contaminated methylprednisolone injections.","volume":"51","author":"Lockhart","year":"2013","journal-title":"J Clin Microbiol"},{"key":"key-10.3201\/eid2605.191045-202004151438-R29","doi-asserted-by":"publisher","first-page":"e49989","DOI":"10.1371\/journal.pone.0049989","article-title":"Whole genome sequence typing to investigate the Apophysomyces outbreak following a tornado in Joplin, Missouri, 2011.","volume":"7","author":"Etienne","year":"2012","journal-title":"PLoS One"},{"key":"key-10.3201\/eid2605.191045-202004151438-R30","doi-asserted-by":"publisher","first-page":"e02309","DOI":"10.1128\/mBio.02309-14","article-title":"Multicenter outbreak of infections by Saprochaete clavata, an unrecognized opportunistic fungal pathogen.","volume":"5","author":"Vaux","year":"2014","journal-title":"MBio"},{"key":"key-10.3201\/eid2605.191045-202004151438-R31","doi-asserted-by":"publisher","first-page":"1377","DOI":"10.1016\/S1473-3099(18)30597-8","article-title":"Multiple introductions and subsequent transmission of multidrug-resistant Candida auris in the USA: a molecular epidemiological survey.","volume":"18","author":"Chow","year":"2018","journal-title":"Lancet Infect Dis"},{"key":"key-10.3201\/eid2605.191045-202004151438-R32","doi-asserted-by":"publisher","first-page":"e28550","DOI":"10.1371\/journal.pone.0028550","article-title":"Whole genome sequence analysis of Cryptococcus gattii from the Pacific Northwest reveals unexpected diversity.","volume":"6","author":"Gillece","year":"2011","journal-title":"PLoS One"},{"key":"key-10.3201\/eid2605.191045-202004151438-R33","doi-asserted-by":"publisher","first-page":"501","DOI":"10.3201\/eid2503.181155","article-title":"Utility of whole-genome sequencing to ascertain locally acquired cases of coccidioidomycosis in Washington State.","volume":"25","author":"Oltean","year":"2019","journal-title":"Emerg Infect Dis"},{"key":"key-10.3201\/eid2605.191045-202004151438-R34","doi-asserted-by":"publisher","first-page":"104","DOI":"10.1038\/s41426-018-0098-x","article-title":"Author Correction: Genomic epidemiology of the UK outbreak of the emerging human fungal pathogen Candida auris.","volume":"7","author":"Rhodes","year":"2018","journal-title":"Emerg Microbes Infect"},{"key":"key-10.3201\/eid2605.191045-202004151438-R35","doi-asserted-by":"publisher","first-page":"e01370","DOI":"10.1128\/genomeA.01370-14","article-title":"Draft genome sequences of symbiotic and nonsymbiotic Rhizopus microsporus strains CBS\u00a0344.29 and ATCC\u00a062417.","volume":"3","author":"Horn","year":"2015","journal-title":"Genome Announc"},{"key":"key-10.3201\/eid2605.191045-202004151438-R36","doi-asserted-by":"publisher","first-page":"773","DOI":"10.1016\/j.cub.2007.03.039","article-title":"Endosymbiont-dependent host reproduction maintains bacterial-fungal mutualism.","volume":"17","author":"Partida-Martinez","year":"2007","journal-title":"Curr Biol"},{"key":"key-10.3201\/eid2605.191045-202004151438-R37","doi-asserted-by":"publisher","first-page":"15102","DOI":"10.1073\/pnas.1615148113","article-title":"Lipid metabolic changes in an early divergent fungus govern the establishment of a mutualistic symbiosis with endobacteria.","volume":"113","author":"Lastovetsky","year":"2016","journal-title":"Proc Natl Acad Sci U S A"}],"container-title":["Emerging Infectious Diseases"],"original-title":[],"link":[{"URL":"https:\/\/wwwnc.cdc.gov\/eid\/article\/26\/5\/19-1045_article","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,11,30]],"date-time":"2024-11-30T17:33:36Z","timestamp":1732988016000},"score":1,"resource":{"primary":{"URL":"http:\/\/wwwnc.cdc.gov\/eid\/article\/26\/5\/19-1045_article.htm"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,5]]},"references-count":37,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2020,5]]}},"URL":"https:\/\/doi.org\/10.3201\/eid2605.191045","relation":{},"ISSN":["1080-6040","1080-6059"],"issn-type":[{"value":"1080-6040","type":"print"},{"value":"1080-6059","type":"electronic"}],"subject":[],"published":{"date-parts":[[2020,5]]}}}