{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,15]],"date-time":"2026-04-15T18:07:48Z","timestamp":1776276468639,"version":"3.50.1"},"reference-count":33,"publisher":"Centers for Disease Control and Prevention (CDC)","issue":"11","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Emerg. Infect. Dis."],"published-print":{"date-parts":[[2022,11]]},"DOI":"10.3201\/eid2811.212066","type":"journal-article","created":{"date-parts":[[2022,10,26]],"date-time":"2022-10-26T13:51:54Z","timestamp":1666792314000},"page":"2253-2260","source":"Crossref","is-referenced-by-count":7,"title":["Genomic Epidemiology of <i>Vibrio cholerae<\/i> O139, Zhejiang Province, China, 1994\u20132018"],"prefix":"10.3201","volume":"28","author":[{"given":"Yun","family":"Luo","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Julian","family":"Ye","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michael","family":"Payne","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dalong","family":"Hu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jianmin","family":"Jiang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ruiting","family":"Lan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"1822","reference":[{"key":"key-10.3201\/eid2811.212066-202210212139-R1","doi-asserted-by":"publisher","first-page":"1539","DOI":"10.1016\/S0140-6736(17)30559-7","article-title":"Cholera.","volume":"390","author":"Clemens","year":"2017","journal-title":"Lancet"},{"key":"key-10.3201\/eid2811.212066-202210212139-R2","doi-asserted-by":"publisher","first-page":"703","DOI":"10.1016\/0140-6736(93)90480-5","article-title":"Emergence of novel strain of Vibrio cholerae with epidemic potential in southern and eastern India.","volume":"341","author":"Ramamurthy","year":"1993","journal-title":"Lancet"},{"key":"key-10.3201\/eid2811.212066-202210212139-R3","doi-asserted-by":"publisher","first-page":"387","DOI":"10.1016\/0140-6736(93)92811-7","article-title":"Large epidemic of cholera-like disease in Bangladesh caused by Vibrio cholerae O139 synonym Bengal.","volume":"342","author":"Choleraworkinggroupinternation","year":"1993","journal-title":"Lancet"},{"key":"key-10.3201\/eid2811.212066-202210212139-R4","doi-asserted-by":"publisher","first-page":"10374","DOI":"10.1073\/pnas.92.22.10374","article-title":"Genetic rearrangements in the rfb regions of Vibrio cholerae O1 and O139.","volume":"92","author":"Stroeher","year":"1995","journal-title":"Proc Natl Acad Sci U S A"},{"key":"key-10.3201\/eid2811.212066-202210212139-R5","doi-asserted-by":"publisher","first-page":"3191","DOI":"10.1128\/jb.177.11.3191-3198.1995","article-title":"The sixth and seventh cholera pandemics are due to independent clones separately derived from environmental, nontoxigenic, non-O1 Vibrio cholerae.","volume":"177","author":"Karaolis","year":"1995","journal-title":"J Bacteriol"},{"key":"key-10.3201\/eid2811.212066-202210212139-R6","first-page":"238","article-title":"Diarrhea outbreak by Vibrio cholerae O139 in Keping Xinjiang","volume":"8","author":"Liu","year":"1993","journal-title":"Dis Surveill"},{"key":"key-10.3201\/eid2811.212066-202210212139-R7","doi-asserted-by":"publisher","first-page":"2679","DOI":"10.1017\/S0950268816001059","article-title":"Genetic relatedness of selected clinical Vibrio cholerae O139 isolates from the southern coastal area of China over a 20-year period.","volume":"144","author":"Li","year":"2016","journal-title":"Epidemiol Infect"},{"key":"key-10.3201\/eid2811.212066-202210212139-R8","doi-asserted-by":"publisher","first-page":"1146","DOI":"10.1128\/JCM.03354-13","article-title":"A molecular surveillance reveals the prevalence of Vibrio cholerae O139 isolates in China from 1993 to 2012.","volume":"52","author":"Zhang","year":"2014","journal-title":"J Clin Microbiol"},{"key":"key-10.3201\/eid2811.212066-202210212139-R9","doi-asserted-by":"publisher","first-page":"140","DOI":"10.1016\/j.ijantimicag.2017.09.009","article-title":"IncA\/C plasmids conferring high azithromycin resistance in vibrio cholerae.","volume":"51","author":"Wang","year":"2018","journal-title":"Int J Antimicrob Agents"},{"key":"key-10.3201\/eid2811.212066-202210212139-R10","doi-asserted-by":"publisher","first-page":"e00561","DOI":"10.1128\/mSystems.00561-19","article-title":"Changing molecular epidemiology of Vibrio cholerae outbreaks in Shanghai, China.","volume":"4","author":"Hu","year":"2019","journal-title":"mSystems"},{"key":"key-10.3201\/eid2811.212066-202210212139-R11","doi-asserted-by":"publisher","first-page":"785","DOI":"10.1126\/science.aad5901","article-title":"Genomic history of the seventh pandemic of cholera in Africa.","volume":"358","author":"Weill","year":"2017","journal-title":"Science"},{"key":"key-10.3201\/eid2811.212066-202210212139-R12","doi-asserted-by":"publisher","first-page":"e38633","DOI":"10.1371\/journal.pone.0038633","article-title":"Multiple antibiotic resistance of Vibrio cholerae serogroup O139 in China from 1993 to 2009.","volume":"7","author":"Yu","year":"2012","journal-title":"PLoS One"},{"key":"key-10.3201\/eid2811.212066-202210212139-R13","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1080\/2159256X.2015.1045116","article-title":"Unraveling the regulatory network of IncA\/C plasmid mobilization: When genomic islands hijack conjugative elements.","volume":"5","author":"Carraro","year":"2015","journal-title":"Mob Genet Elements"},{"key":"key-10.3201\/eid2811.212066-202210212139-R14","doi-asserted-by":"publisher","first-page":"e00509","DOI":"10.1128\/mBio.00509-16","article-title":"IncA\/C conjugative plasmids mobilize a new family of multidrug resistance islands in clinical Vibrio cholerae non-O1\/non-O139 isolates from Haiti.","volume":"7","author":"Carraro","year":"2016","journal-title":"MBio"},{"key":"key-10.3201\/eid2811.212066-202210212139-R15","doi-asserted-by":"publisher","first-page":"295421","DOI":"10.1155\/2014\/295421","article-title":"O serogroup-specific touchdown-multiplex polymerase chain reaction for detection and identification of Vibrio cholerae O1, O139, and non-O1\/non-O139.","volume":"2014","author":"Bhumiratana","year":"2014","journal-title":"Biochem Res Int"},{"key":"key-10.3201\/eid2811.212066-202210212139-R16","doi-asserted-by":"publisher","first-page":"R46","DOI":"10.1186\/gb-2014-15-3-r46","article-title":"Kraken: ultrafast metagenomic sequence classification using exact alignments.","volume":"15","author":"Wood","year":"2014","journal-title":"Genome Biol"},{"key":"key-10.3201\/eid2811.212066-202210212139-R17","doi-asserted-by":"publisher","first-page":"563","DOI":"10.1093\/molbev\/msz241","article-title":"Living trees: high-quality reproducible and reusable construction of bacterial phylogenetic trees.","volume":"37","author":"Hu","year":"2020","journal-title":"Mol Biol Evol"},{"key":"key-10.3201\/eid2811.212066-202210212139-R18","doi-asserted-by":"publisher","first-page":"5865","DOI":"10.1038\/s41598-019-41883-x","article-title":"High quality reference genomes for toxigenic and non-toxigenic Vibrio cholerae serogroup O139.","volume":"9","author":"Dorman","year":"2019","journal-title":"Sci Rep"},{"key":"key-10.3201\/eid2811.212066-202210212139-R19","doi-asserted-by":"publisher","first-page":"1530","DOI":"10.1093\/molbev\/msaa015","article-title":"IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era.","volume":"37","author":"Minh","year":"2020","journal-title":"Mol Biol Evol"},{"key":"key-10.3201\/eid2811.212066-202210212139-R20","doi-asserted-by":"publisher","first-page":"e00483","DOI":"10.1128\/AAC.00483-19","article-title":"Validating the AMRFinder tool and resistance gene database by using antimicrobial resistance genotype-phenotype correlations in a collection of isolates.","volume":"63","author":"Feldgarden","year":"2019","journal-title":"Antimicrob Agents Chemother"},{"key":"key-10.3201\/eid2811.212066-202210212139-R21","doi-asserted-by":"publisher","first-page":"3895","DOI":"10.1128\/AAC.02412-14","article-title":"In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing.","volume":"58","author":"Carattoli","year":"2014","journal-title":"Antimicrob Agents Chemother"},{"key":"key-10.3201\/eid2811.212066-202210212139-R22","doi-asserted-by":"publisher","first-page":"307","DOI":"10.1186\/s12859-018-2336-6","article-title":"Rapid and precise alignment of raw reads against redundant databases with KMA.","volume":"19","author":"Clausen","year":"2018","journal-title":"BMC Bioinformatics"},{"key":"key-10.3201\/eid2811.212066-202210212139-R23","doi-asserted-by":"publisher","first-page":"974","DOI":"10.1101\/gr.114876.110","article-title":"CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing.","volume":"21","author":"Abyzov","year":"2011","journal-title":"Genome Res"},{"key":"key-10.3201\/eid2811.212066-202210212139-R24","doi-asserted-by":"publisher","first-page":"1134","DOI":"10.1086\/516453","article-title":"Molecular characterization of Vibrio cholerae O1 biotype El Tor strains isolated between 1992 and 1995 in Calcutta, India: evidence for the emergence of a new clone of the El Tor biotype.","volume":"175","author":"Sharma","year":"1997","journal-title":"J Infect Dis"},{"key":"key-10.3201\/eid2811.212066-202210212139-R25","doi-asserted-by":"publisher","first-page":"e1000786","DOI":"10.1371\/journal.pgen.1000786","article-title":"Comparative ICE genomics: insights into the evolution of the SXT\/R391 family of ICEs.","volume":"5","author":"Wozniak","year":"2009","journal-title":"PLoS Genet"},{"key":"key-10.3201\/eid2811.212066-202210212139-R26","doi-asserted-by":"publisher","first-page":"e0103321","DOI":"10.1128\/mra.01033-21","article-title":"Closed genome sequence of an environmental Aeromonas veronii strain from California, United States, with an IncA\/C plasmid carrying an extended-spectrum \u03b2-lactamase gene, blaVEB-3.","volume":"11","author":"Lovero","year":"2022","journal-title":"Microbiol Resour Announc"},{"key":"key-10.3201\/eid2811.212066-202210212139-R27","doi-asserted-by":"publisher","first-page":"e0169324","DOI":"10.1371\/journal.pone.0169324","article-title":"Characterization and genetic variation of Vibrio cholerae isolated from clinical and environmental sources in Thailand.","volume":"12","author":"Siriphap","year":"2017","journal-title":"PLoS One"},{"key":"key-10.3201\/eid2811.212066-202210212139-R28","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1017\/S0950268897007553","article-title":"Minimum inhibitory concentration (MIC) of some antibiotics against Vibrio cholerae O139 isolates from Pondicherry.","volume":"119","author":"Vijayalakshmi","year":"1997","journal-title":"Epidemiol Infect"},{"key":"key-10.3201\/eid2811.212066-202210212139-R29","doi-asserted-by":"publisher","first-page":"3435","DOI":"10.1073\/pnas.1222743110","article-title":"Diverse and abundant antibiotic resistance genes in Chinese swine farms.","volume":"110","author":"Zhu","year":"2013","journal-title":"Proc Natl Acad Sci U S A"},{"key":"key-10.3201\/eid2811.212066-202210212139-R30","doi-asserted-by":"publisher","first-page":"372","DOI":"10.1099\/jmm.0.001131","article-title":"Haitian-like genetic traits with creeping MIC of Azithromycin in Vibrio cholerae O1 isolates from Puducherry, India.","volume":"69","author":"Mohanraj","year":"2020","journal-title":"J Med Microbiol"},{"key":"key-10.3201\/eid2811.212066-202210212139-R31","unstructured":"David G. Antimicrobial drugs: chronicle of a twentieth century medical triumph. First edition. Oxford: Oxford University Press; 2008."},{"key":"key-10.3201\/eid2811.212066-202210212139-R32","doi-asserted-by":"publisher","first-page":"879","DOI":"10.1002\/mbo3.286","article-title":"Loss of membrane-bound lytic transglycosylases increases outer membrane permeability and \u03b2-lactam sensitivity in Pseudomonas aeruginosa.","volume":"4","author":"Lamers","year":"2015","journal-title":"MicrobiologyOpen"},{"key":"key-10.3201\/eid2811.212066-202210212139-R33","doi-asserted-by":"publisher","first-page":"319","DOI":"10.1007\/s00248-020-01645-z","article-title":"Population structure and multidrug resistance of non-O1\/non-O139 Vibrio cholerae in freshwater rivers in Zhejiang, China.","volume":"82","author":"Luo","year":"2021","journal-title":"Microb Ecol"}],"container-title":["Emerging Infectious Diseases"],"original-title":[],"link":[{"URL":"https:\/\/wwwnc.cdc.gov\/eid\/article\/28\/11\/21-2066_article","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,11,30]],"date-time":"2024-11-30T17:53:51Z","timestamp":1732989231000},"score":1,"resource":{"primary":{"URL":"https:\/\/wwwnc.cdc.gov\/eid\/article\/28\/11\/21-2066_article.htm"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022,11]]},"references-count":33,"journal-issue":{"issue":"11","published-print":{"date-parts":[[2022,11]]}},"URL":"https:\/\/doi.org\/10.3201\/eid2811.212066","relation":{},"ISSN":["1080-6040","1080-6059"],"issn-type":[{"value":"1080-6040","type":"print"},{"value":"1080-6059","type":"electronic"}],"subject":[],"published":{"date-parts":[[2022,11]]}}}