{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,13]],"date-time":"2026-10-13T17:28:27Z","timestamp":1791912507617,"version":"4.3.4"},"reference-count":70,"publisher":"Centers for Disease Control and Prevention (CDC)","issue":"2","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Emerg. Infect. Dis."],"published-print":{"date-parts":[[2024,2]]},"DOI":"10.3201\/eid3002.230768","type":"journal-article","created":{"date-parts":[[2024,1,12]],"date-time":"2024-01-12T16:16:05Z","timestamp":1705076165000},"source":"Crossref","is-referenced-by-count":41,"title":["Key Challenges for Respiratory Virus Surveillance while Transitioning out of Acute Phase of COVID-19 Pandemic"],"prefix":"10.3201","volume":"30","author":[{"given":"Oliver","family":"Eales","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Michael J.","family":"Plank","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Benjamin J.","family":"Cowling","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Benjamin P.","family":"Howden","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Adam J.","family":"Kucharski","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sheena G.","family":"Sullivan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Katelijn","family":"Vandemaele","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cecile","family":"Viboud","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Steven","family":"Riley","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"James M.","family":"McCaw","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Freya M.","family":"Shearer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1822","reference":[{"key":"key-10.3201\/eid3002.230768-202401081520-R1","doi-asserted-by":"publisher","first-page":"1630","DOI":"10.1016\/j.jiph.2020.07.019","article-title":"Epidemiologic surveillance for controlling Covid-19 pandemic: types, challenges and implications.","volume":"13","author":"Ibrahim","year":"2020","journal-title":"J Infect Public Health"},{"key":"key-10.3201\/eid3002.230768-202401081520-R2","doi-asserted-by":"publisher","first-page":"356","DOI":"10.1038\/s41467-020-20742-8","article-title":"Optimal COVID-19 quarantine and testing strategies.","volume":"12","author":"Wells","year":"2021","journal-title":"Nat Commun"},{"key":"key-10.3201\/eid3002.230768-202401081520-R3","doi-asserted-by":"publisher","first-page":"100256","DOI":"10.1016\/j.lanwpc.2021.100256","article-title":"COVID-19 vaccine strategies for Aotearoa New Zealand: a mathematical modelling study.","volume":"15","author":"Nguyen","year":"2021","journal-title":"Lancet Reg Health West Pac"},{"key":"key-10.3201\/eid3002.230768-202401081520-R4","doi-asserted-by":"publisher","first-page":"eabq4411","DOI":"10.1126\/science.abq4411","article-title":"Twin peaks: The Omicron SARS-CoV-2 BA.1 and BA.2 epidemics in England.","volume":"376","author":"Elliott","year":"2022","journal-title":"Science"},{"key":"key-10.3201\/eid3002.230768-202401081520-R5","doi-asserted-by":"publisher","first-page":"e30","DOI":"10.1016\/S2468-2667(20)30282-6","article-title":"Community prevalence of SARS-CoV-2 in England from April to November, 2020: results from the ONS Coronavirus Infection Survey.","volume":"6","author":"Pouwels","year":"2021","journal-title":"Lancet Public Health"},{"key":"key-10.3201\/eid3002.230768-202401081520-R6","doi-asserted-by":"publisher","first-page":"e1010724","DOI":"10.1371\/journal.pcbi.1010724","article-title":"Trends in SARS-CoV-2 infection prevalence during England\u2019s roadmap out of lockdown, January to July 2021.","volume":"18","author":"Eales","year":"2022","journal-title":"PLOS Comput Biol"},{"key":"key-10.3201\/eid3002.230768-202401081520-R7","doi-asserted-by":"publisher","first-page":"100446","DOI":"10.1016\/j.lanepe.2022.100446","article-title":"Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission.","volume":"19","author":"Manica","year":"2022","journal-title":"Lancet Reg Health Eur"},{"key":"key-10.3201\/eid3002.230768-202401081520-R8","doi-asserted-by":"publisher","first-page":"7727","DOI":"10.1038\/s41467-022-35496-8","article-title":"Inferring time-varying generation time, serial interval, and incubation period distributions for COVID-19.","volume":"13","author":"Chen","year":"2022","journal-title":"Nat Commun"},{"key":"key-10.3201\/eid3002.230768-202401081520-R9","doi-asserted-by":"publisher","first-page":"e78089","DOI":"10.7554\/eLife.78089","article-title":"A modelling approach to estimate the transmissibility of SARS-CoV-2 during periods of high, low, and zero case incidence.","volume":"12","author":"Golding","year":"2023","journal-title":"eLife"},{"key":"key-10.3201\/eid3002.230768-202401081520-R10","doi-asserted-by":"publisher","first-page":"e2213313119","DOI":"10.1073\/pnas.2213313119","article-title":"Pandemic fatigue impedes mitigation of COVID-19 in Hong Kong.","volume":"119","author":"Du","year":"2022","journal-title":"Proc Natl Acad Sci U S A"},{"key":"key-10.3201\/eid3002.230768-202401081520-R11","doi-asserted-by":"publisher","first-page":"124","DOI":"10.1186\/s12916-020-01597-8","article-title":"Quantifying the impact of physical distance measures on the transmission of COVID-19 in the UK.","volume":"18","author":"Jarvis","year":"2020","journal-title":"BMC Med"},{"key":"key-10.3201\/eid3002.230768-202401081520-R12","doi-asserted-by":"publisher","first-page":"e229","DOI":"10.1016\/S2666-5247(20)30116-6","article-title":"A genomics network established to respond rapidly to public health threats in South Africa.","volume":"1","author":"Msomi","year":"2020","journal-title":"Lancet Microbe"},{"key":"key-10.3201\/eid3002.230768-202401081520-R13","doi-asserted-by":"publisher","first-page":"865","DOI":"10.1038\/s41467-022-28529-9","article-title":"AusTrakka: Fast-tracking nationalized genomics surveillance in response to the COVID-19 pandemic.","volume":"13","author":"Hoang","year":"2022","journal-title":"Nat Commun"},{"key":"key-10.3201\/eid3002.230768-202401081520-R14","doi-asserted-by":"publisher","first-page":"1049","DOI":"10.46234\/ccdcw2021.255","article-title":"GISAID\u2019s role in pandemic response.","volume":"3","author":"Khare","year":"2021","journal-title":"China CDC Wkly"},{"key":"key-10.3201\/eid3002.230768-202401081520-R15","doi-asserted-by":"publisher","first-page":"e99","DOI":"10.1016\/S2666-5247(20)30054-9","article-title":"An integrated national scale SARS-CoV-2 genomic surveillance network.","volume":"1","author":"COVID-19 Genomics UK (COG-UK) consortiumcontact@cogconsortium.uk","year":"2020","journal-title":"Lancet Microbe"},{"key":"key-10.3201\/eid3002.230768-202401081520-R16","unstructured":"World Health Organization Global Influenza Programme. Integrated sentinel surveillance of influenza and SARS-CoV-2 and the development of the Global Influenza Surveillance and Response System Plus: virtual meeting, 12\u201314 October 2021. 2022 Jun 15 [cited 2023 Feb 1]. https:\/\/www.who.int\/publications\/i\/item\/9789240050228"},{"key":"key-10.3201\/eid3002.230768-202401081520-R17","unstructured":"World Health Organization. Statement on the fourteenth meeting of the International Health Regulations (2005) Emergency Committee regarding the coronavirus disease (COVID-19) pandemic. 2023 Jan 30 [cited 2023 Feb 2]. https:\/\/www.who.int\/news\/item\/30-01-2023-statement-on-the-fourteenth-meeting-of-the-international-health-regulations-(2005)-emergency-committee-regarding-the-coronavirus-disease-(covid-19)-pandemic"},{"key":"key-10.3201\/eid3002.230768-202401081520-R18","doi-asserted-by":"publisher","first-page":"495","DOI":"10.1038\/s41586-021-03792-w","article-title":"After the pandemic: perspectives on the future trajectory of COVID-19.","volume":"596","author":"Telenti","year":"2021","journal-title":"Nature"},{"key":"key-10.3201\/eid3002.230768-202401081520-R19","doi-asserted-by":"publisher","first-page":"1002","DOI":"10.1016\/j.ijid.2022.08.002","article-title":"Understanding the rebound of influenza in the post COVID-19 pandemic period holds important clues for epidemiology and control.","volume":"122","author":"Lee","year":"2022","journal-title":"Int J Infect Dis"},{"key":"key-10.3201\/eid3002.230768-202401081520-R20","unstructured":"World Health Organization Mosaic Respiratory Surveillance Framework. \u201cCrafting the mosaic\u201d: a framework for resilient surveillance for respiratory viruses of epidemic and pandemic potential. 2023 Mar 8 [cited 2023 Apr 1]. https:\/\/www.who.int\/publications\/i\/item\/9789240070288"},{"key":"key-10.3201\/eid3002.230768-202401081520-R21","unstructured":"World Health Organization Health Emergencies Programme (WHE). 10 proposals to build a safer world together: strengthening the global architecture for health emergency preparedness, response and resilience. 2022 Jun [cited 2023 Feb 1]. https:\/\/cdn.who.int\/media\/docs\/default-source\/emergency-preparedness\/who_hepr_june30draftforconsult.pdf"},{"key":"key-10.3201\/eid3002.230768-202401081520-R22","unstructured":"UK Prime Minister\u2019s Office. Prime Minister announces national lockdown. 2021 Jan 4 [cited 2021 Apr 22]. https:\/\/www.gov.uk\/government\/news\/prime-minister-announces-national-lockdown"},{"key":"key-10.3201\/eid3002.230768-202401081520-R23","unstructured":"Premier of Victoria. Extended Melbourne lockdown to keep Victorians safe. 2021 Aug 16 [cited 2021 Sep 10]. https:\/\/www.premier.vic.gov.au\/extended-melbourne-lockdown-keep-victorians-safe-0"},{"key":"key-10.3201\/eid3002.230768-202401081520-R24","doi-asserted-by":"publisher","first-page":"1305","DOI":"10.15585\/mmwr.mm6937a6","article-title":"Decreased influenza activity during the COVID-19 pandemic\u2014United States, Australia, Chile, and South Africa, 2020.","volume":"69","author":"Olsen","year":"2020","journal-title":"MMWR Morb Mortal Wkly Rep"},{"key":"key-10.3201\/eid3002.230768-202401081520-R25","doi-asserted-by":"publisher","first-page":"814","DOI":"10.1126\/science.adf8989","article-title":"Will viral interference hold off the tripledemic?","volume":"378","author":"Cohen","year":"2022","journal-title":"Science"},{"key":"key-10.3201\/eid3002.230768-202401081520-R26","unstructured":"Brown CS, Jorgensen P, Mott JA, Pereyaslov D, Martiryosan L, Meerhoff T,  WHO Regional Office for Europe guidance for sentinel influenza surveillance in humans. 2011 May [cited 2023 Jan 1]. https:\/\/apps.who.int\/iris\/bitstream\/handle\/10665\/349780\/WHO-EURO-2011-4258-44021-62085-eng.pdf"},{"key":"key-10.3201\/eid3002.230768-202401081520-R27","doi-asserted-by":"publisher","first-page":"105","DOI":"10.1111\/irv.12705","article-title":"Coordinating the real-time use of global influenza activity data for better public health planning.","volume":"14","author":"Biggerstaff","year":"2020","journal-title":"Influenza Other Respir Viruses"},{"key":"key-10.3201\/eid3002.230768-202401081520-R28","doi-asserted-by":"publisher","first-page":"1410","DOI":"10.1016\/S0140-6736(01)06528-X","article-title":"Contribution of influenza and respiratory syncytial virus to community cases of influenza-like illness: an observational study.","volume":"358","author":"Zambon","year":"2001","journal-title":"Lancet"},{"key":"key-10.3201\/eid3002.230768-202401081520-R29","doi-asserted-by":"publisher","first-page":"e1008301","DOI":"10.1371\/journal.pcbi.1008301","article-title":"Aggregating forecasts of multiple respiratory pathogens supports more accurate forecasting of influenza-like illness.","volume":"16","author":"Pei","year":"2020","journal-title":"PLOS Comput Biol"},{"key":"key-10.3201\/eid3002.230768-202401081520-R30","doi-asserted-by":"publisher","first-page":"e1003777","DOI":"10.1371\/journal.pmed.1003777","article-title":"Predictive symptoms for COVID-19 in the community: REACT-1 study of over 1 million people.","volume":"18","author":"Elliott","year":"2021","journal-title":"PLoS Med"},{"key":"key-10.3201\/eid3002.230768-202401081520-R31","doi-asserted-by":"publisher","first-page":"330","DOI":"10.1111\/j.1750-2659.2012.00395.x","article-title":"Virus detection and its association with symptoms during influenza-like illness in a sample of healthy adults enrolled in a randomised controlled vaccine trial.","volume":"7","author":"Howard","year":"2013","journal-title":"Influenza Other Respir Viruses"},{"key":"key-10.3201\/eid3002.230768-202401081520-R32","doi-asserted-by":"publisher","first-page":"834","DOI":"10.1093\/aje\/kws314","article-title":"Infection fatality risk of the pandemic A(H1N1)2009 virus in Hong Kong.","volume":"177","author":"Wong","year":"2013","journal-title":"Am J Epidemiol"},{"key":"key-10.3201\/eid3002.230768-202401081520-R33","doi-asserted-by":"publisher","first-page":"12","DOI":"10.3390\/tropicalmed4010012","article-title":"Accounting for healthcare-seeking behaviours and testing practices in real-time influenza forecasts.","volume":"4","author":"Moss","year":"2019","journal-title":"Trop Med Infect Dis"},{"key":"key-10.3201\/eid3002.230768-202401081520-R34","doi-asserted-by":"publisher","first-page":"238","DOI":"10.1186\/s12879-017-2337-5","article-title":"Disease severity determines health-seeking behaviour amongst individuals with influenza-like illness in an internet-based cohort.","volume":"17","author":"Peppa","year":"2017","journal-title":"BMC Infect Dis"},{"key":"key-10.3201\/eid3002.230768-202401081520-R35","doi-asserted-by":"publisher","first-page":"990","DOI":"10.1126\/science.abf0874","article-title":"Resurgence of SARS-CoV-2: Detection by community viral surveillance.","volume":"372","author":"Riley","year":"2021","journal-title":"Science"},{"key":"key-10.3201\/eid3002.230768-202401081520-R36","doi-asserted-by":"publisher","first-page":"185","DOI":"10.1038\/d41586-022-00336-8","article-title":"Tracking COVID-19 infections: time for change.","volume":"602","author":"Dean","year":"2022","journal-title":"Nature"},{"key":"key-10.3201\/eid3002.230768-202401081520-R37","doi-asserted-by":"publisher","first-page":"1825","DOI":"10.1016\/S0140-6736(21)02276-5","article-title":"Non-pharmaceutical interventions, vaccination, and the SARS-CoV-2 delta variant in England: a mathematical modelling study.","volume":"398","author":"Sonabend","year":"2021","journal-title":"Lancet"},{"key":"key-10.3201\/eid3002.230768-202401081520-R38","doi-asserted-by":"publisher","first-page":"355","DOI":"10.1016\/S2213-2600(21)00542-7","article-title":"SARS-CoV-2 infection and vaccine effectiveness in England (REACT-1): a series of cross-sectional random community surveys.","volume":"10","author":"Chadeau-Hyam","year":"2022","journal-title":"Lancet Respir Med"},{"key":"key-10.3201\/eid3002.230768-202401081520-R39","doi-asserted-by":"publisher","first-page":"2127","DOI":"10.1038\/s41591-021-01548-7","article-title":"Effect of Delta variant on viral burden and vaccine effectiveness against new SARS-CoV-2 infections in the UK.","volume":"27","author":"Pouwels","year":"2021","journal-title":"Nat Med"},{"key":"key-10.3201\/eid3002.230768-202401081520-R40","doi-asserted-by":"publisher","first-page":"647","DOI":"10.1186\/s12879-022-07628-4","article-title":"SARS-CoV-2 lineage dynamics in England from September to November 2021: high diversity of Delta sub-lineages and increased transmissibility of AY.4.2.","volume":"22","author":"Eales","year":"2022","journal-title":"BMC Infect Dis"},{"key":"key-10.3201\/eid3002.230768-202401081520-R41","doi-asserted-by":"publisher","first-page":"4375","DOI":"10.1038\/s41467-022-32096-4","article-title":"Dynamics of competing SARS-CoV-2 variants during the Omicron epidemic in England.","volume":"13","author":"Eales","year":"2022","journal-title":"Nat Commun"},{"key":"key-10.3201\/eid3002.230768-202401081520-R42","unstructured":"Office for National Statistics (ONS). Prevalence of ongoing symptoms following coronavirus (COVID-19) infection in the UK. Office for National Statistics; 30 Mar 2023 [cited 2023 Apr 19]. https:\/\/www.ons.gov.uk\/peoplepopulationandcommunity\/healthandsocialcare\/conditionsanddiseases\/bulletins\/prevalenceofongoingsymptomsfollowingcoronaviruscovid19infectionintheuk\/30march2023"},{"key":"key-10.3201\/eid3002.230768-202401081520-R43","doi-asserted-by":"publisher","first-page":"1854","DOI":"10.1038\/s41591-021-01545-w","article-title":"Monitoring key epidemiological parameters of SARS-CoV-2 transmission.","volume":"27","author":"Kraemer","year":"2021","journal-title":"Nat Med"},{"key":"key-10.3201\/eid3002.230768-202401081520-R44","doi-asserted-by":"publisher","first-page":"599","DOI":"10.1098\/rspb.2006.3754","article-title":"How generation intervals shape the relationship between growth rates and reproductive numbers.","volume":"274","author":"Wallinga","year":"2007","journal-title":"Proc Biol Sci"},{"key":"key-10.3201\/eid3002.230768-202401081520-R45","doi-asserted-by":"publisher","first-page":"603","DOI":"10.1016\/S1473-3099(22)00001-9","article-title":"Generation time of the alpha and delta SARS-CoV-2 variants: an epidemiological analysis.","volume":"22","author":"Hart","year":"2022","journal-title":"Lancet Infect Dis"},{"key":"key-10.3201\/eid3002.230768-202401081520-R46","doi-asserted-by":"publisher","first-page":"e2221887120","DOI":"10.1073\/pnas.2221887120","article-title":"Inferring the differences in incubation-period and generation-interval distributions of the Delta and Omicron variants of SARS-CoV-2.","volume":"120","author":"Park","year":"2023","journal-title":"Proc Natl Acad Sci U S A"},{"key":"key-10.3201\/eid3002.230768-202401081520-R47","doi-asserted-by":"publisher","first-page":"eabg3055","DOI":"10.1126\/science.abg3055","article-title":"Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England.","volume":"372","author":"Davies","year":"2021","journal-title":"Science"},{"key":"key-10.3201\/eid3002.230768-202401081520-R48","doi-asserted-by":"publisher","first-page":"e3002118","DOI":"10.1371\/journal.pbio.3002118","article-title":"Dynamics of SARS-CoV-2 infection hospitalisation and infection fatality ratios over 23 months in England.","volume":"21","author":"Eales","year":"2023","journal-title":"PLoS Biol"},{"key":"key-10.3201\/eid3002.230768-202401081520-R49","doi-asserted-by":"publisher","first-page":"1040","DOI":"10.1093\/aje\/kwx334","article-title":"Systematic assessment of multiple routine and near real-time indicators to classify the severity of influenza seasons and pandemics in the United States, 2003\u20132004 through 2015\u20132016.","volume":"187","author":"Biggerstaff","year":"2018","journal-title":"Am J Epidemiol"},{"key":"key-10.3201\/eid3002.230768-202401081520-R50","doi-asserted-by":"publisher","first-page":"246","DOI":"10.1038\/s41467-022-35652-0","article-title":"Rapidly shifting immunologic landscape and severity of SARS-CoV-2 in the Omicron era in South Africa.","volume":"14","author":"Sun","year":"2023","journal-title":"Nat Commun"},{"key":"key-10.3201\/eid3002.230768-202401081520-R51","unstructured":"World Health Organization. Interim statement on hybrid immunity and increasing population seroprevalence rates. 2022 Jun 1 [cited 2023 Feb 1]. https:\/\/www.who.int\/news\/item\/01-06-2022-interim-statement-on-hybrid-immunity-and-increasing-population-seroprevalence-rates"},{"key":"key-10.3201\/eid3002.230768-202401081520-R52","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/s00285-015-0873-4","article-title":"Capturing the dynamics of pathogens with many strains.","volume":"72","author":"Kucharski","year":"2016","journal-title":"J Math Biol"},{"key":"key-10.3201\/eid3002.230768-202401081520-R53","doi-asserted-by":"publisher","first-page":"405","DOI":"10.4161\/hv.22908","article-title":"Correlates of protection to influenza virus, where do we go from here?","volume":"9","author":"Cox","year":"2013","journal-title":"Hum Vaccin Immunother"},{"key":"key-10.3201\/eid3002.230768-202401081520-R54","doi-asserted-by":"publisher","first-page":"e2004974","DOI":"10.1371\/journal.pbio.2004974","article-title":"Timescales of influenza A\/H3N2 antibody dynamics.","volume":"16","author":"Kucharski","year":"2018","journal-title":"PLoS Biol"},{"key":"key-10.3201\/eid3002.230768-202401081520-R55","doi-asserted-by":"publisher","first-page":"3025","DOI":"10.1038\/s41467-021-23233-6","article-title":"Prevalence of SARS-CoV-2 antibodies in France: results from nationwide serological surveillance.","volume":"12","author":"Le Vu","year":"2021","journal-title":"Nat Commun"},{"key":"key-10.3201\/eid3002.230768-202401081520-R56","doi-asserted-by":"publisher","first-page":"905","DOI":"10.1038\/s41467-021-21237-w","article-title":"SARS-CoV-2 antibody prevalence in England following the first peak of the pandemic.","volume":"12","author":"Ward","year":"2021","journal-title":"Nat Commun"},{"key":"key-10.3201\/eid3002.230768-202401081520-R57","unstructured":"Centers for Disease Control and Prevention. Science brief: SARS-CoV-2 infection-induced and vaccine-induced immunity. 2021 Oct 29 [cited 2023 Dec 19]. https:\/\/www.ncbi.nlm.nih.gov\/books\/NBK575088"},{"key":"key-10.3201\/eid3002.230768-202401081520-R58","doi-asserted-by":"publisher","first-page":"1205","DOI":"10.1038\/s41591-021-01377-8","article-title":"Neutralizing antibody levels are highly predictive of immune protection from symptomatic SARS-CoV-2 infection.","volume":"27","author":"Khoury","year":"2021","journal-title":"Nat Med"},{"key":"key-10.3201\/eid3002.230768-202401081520-R59","doi-asserted-by":"publisher","first-page":"43","DOI":"10.1126\/science.abm3425","article-title":"Immune correlates analysis of the mRNA-1273 COVID-19 vaccine efficacy clinical trial.","volume":"375","author":"Gilbert","year":"2022","journal-title":"Science"},{"key":"key-10.3201\/eid3002.230768-202401081520-R60","doi-asserted-by":"publisher","first-page":"239","DOI":"10.1056\/NEJMoa2107456","article-title":"C4591001 Clinical Trial Group. Safety, immunogenicity, and efficacy of the BNT162b2 COVID-19 vaccine in adolescents.","volume":"385","author":"Frenck","year":"2021","journal-title":"N Engl J Med"},{"key":"key-10.3201\/eid3002.230768-202401081520-R61","doi-asserted-by":"publisher","first-page":"e03568","DOI":"10.7554\/eLife.03568","article-title":"Predicting evolution from the shape of genealogical trees.","volume":"3","author":"Neher","year":"2014","journal-title":"eLife"},{"key":"key-10.3201\/eid3002.230768-202401081520-R62","doi-asserted-by":"publisher","first-page":"57","DOI":"10.1038\/nature13087","article-title":"A predictive fitness model for influenza.","volume":"507","author":"Luksza","year":"2014","journal-title":"Nature"},{"key":"key-10.3201\/eid3002.230768-202401081520-R63","doi-asserted-by":"publisher","first-page":"3146","DOI":"10.1073\/pnas.1812594116","article-title":"A collaborative multiyear, multimodel assessment of seasonal influenza forecasting in the United States.","volume":"116","author":"Reich","year":"2019","journal-title":"Proc Natl Acad Sci U S A"},{"key":"key-10.3201\/eid3002.230768-202401081520-R64","doi-asserted-by":"publisher","first-page":"e54445","DOI":"10.1371\/journal.pone.0054445","article-title":"Latitudinal variations in seasonal activity of influenza and respiratory syncytial virus (RSV): a global comparative review.","volume":"8","author":"Bloom-Feshbach","year":"2013","journal-title":"PLoS One"},{"key":"key-10.3201\/eid3002.230768-202401081520-R65","doi-asserted-by":"publisher","first-page":"e89","DOI":"10.1371\/journal.pmed.0030089","article-title":"Influenza in tropical regions.","volume":"3","author":"Viboud","year":"2006","journal-title":"PLoS Med"},{"key":"key-10.3201\/eid3002.230768-202401081520-R66","doi-asserted-by":"publisher","first-page":"860","DOI":"10.1126\/science.abb5793","article-title":"Projecting the transmission dynamics of SARS-CoV-2 through the postpandemic period.","volume":"368","author":"Kissler","year":"2020","journal-title":"Science"},{"key":"key-10.3201\/eid3002.230768-202401081520-R67","doi-asserted-by":"publisher","first-page":"811","DOI":"10.1126\/science.abd7343","article-title":"Immune life history, vaccination, and the dynamics of SARS-CoV-2 over the next 5 years.","volume":"370","author":"Saad-Roy","year":"2020","journal-title":"Science"},{"key":"key-10.3201\/eid3002.230768-202401081520-R68","doi-asserted-by":"publisher","first-page":"406","DOI":"10.1093\/infdis\/jiy184","article-title":"Investigating viral interference between influenza a virus and human respiratory syncytial virus in a ferret model of infection.","volume":"218","author":"Chan","year":"2018","journal-title":"J Infect Dis"},{"key":"key-10.3201\/eid3002.230768-202401081520-R69","doi-asserted-by":"publisher","first-page":"1701","DOI":"10.1093\/infdis\/jiv260","article-title":"Interval between infections and viral hierarchy are determinants of viral interference following influenza virus infection in a ferret model.","volume":"212","author":"Laurie","year":"2015","journal-title":"J Infect Dis"},{"key":"key-10.3201\/eid3002.230768-202401081520-R70","doi-asserted-by":"publisher","first-page":"e1004334","DOI":"10.1371\/journal.pcbi.1004334","article-title":"Innate immunity and the inter-exposure interval determine the dynamics of secondary influenza virus infection and explain observed viral hierarchies.","volume":"11","author":"Cao","year":"2015","journal-title":"PLOS Comput Biol"}],"container-title":["Emerging Infectious Diseases"],"original-title":[],"link":[{"URL":"https:\/\/wwwnc.cdc.gov\/eid\/article\/30\/2\/23-0768_article","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,11,29]],"date-time":"2024-11-29T18:37:11Z","timestamp":1732905431000},"score":1,"resource":{"primary":{"URL":"https:\/\/wwwnc.cdc.gov\/eid\/article\/30\/2\/23-0768_article"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,2]]},"references-count":70,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2024,2]]}},"URL":"https:\/\/doi.org\/10.3201\/eid3002.230768","relation":{},"ISSN":["1080-6040","1080-6059"],"issn-type":[{"value":"1080-6040","type":"print"},{"value":"1080-6059","type":"electronic"}],"subject":[],"published":{"date-parts":[[2024,2]]}}}