{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,9]],"date-time":"2026-10-09T21:55:42Z","timestamp":1791582942452,"version":"4.3.4"},"reference-count":37,"publisher":"Centers for Disease Control and Prevention (CDC)","issue":"2","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Emerg. Infect. Dis."],"published-print":{"date-parts":[[2023,2]]},"DOI":"10.3201\/eid3002.231142","type":"journal-article","created":{"date-parts":[[2024,1,12]],"date-time":"2024-01-12T11:17:13Z","timestamp":1705058233000},"source":"Crossref","is-referenced-by-count":5,"title":["Piscichuvirus-Associated Severe Meningoencephalomyelitis in Aquatic Turtles, United States, 2009\u20132021"],"prefix":"10.3201","volume":"30","author":[{"given":"Weerapong","family":"Laovechprasit","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kelsey T.","family":"Young","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Brian A.","family":"Stacy","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Steven B.","family":"Tillis","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Robert J.","family":"Ossiboff","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jordan A.","family":"Vann","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kuttichantran","family":"Subramaniam","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dalen W.","family":"Agnew","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Elizabeth W.","family":"Howerth","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jian","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shayna","family":"Whitaker","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alicia","family":"Walker","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrew M.","family":"Orgill","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lyndsey N.","family":"Howell","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Donna J.","family":"Shaver","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kyle","family":"Donnelly","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Allen M.","family":"Foley","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"James B.","family":"Stanton","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1822","reference":[{"key":"key-10.3201\/eid3002.231142-202401121106-R1","doi-asserted-by":"publisher","first-page":"6509","DOI":"10.1111\/gcb.16378","article-title":"Global patterns of illegal marine turtle exploitation.","volume":"28","author":"Senko","year":"2022","journal-title":"Glob Change Biol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R2","unstructured":"Rhodin AGJ, Iverson JB, Bour R, Fritz U, Georges A, Shaffer HB, ; Turtle Taxonomy Working Group. Turtles of the world: annotated checklist and atlas of taxonomy, synonymy, distribution, and conservation status. In: Rhodin AGJ, Iverson JB, van Dijk PP, Stanford CB, Goode EV, Buhlmann, KA, et al., editors. Conservation Biology of Freshwater Turtles and Tortoises: a Compilation Project of the IUCN\/SSC Tortoise and Freshwater Turtle Specialist Group. 9th ed. Chelonian Research Monographs. Rochester (NY): Mercury Print Productions. 2021;8:1\u2013472."},{"key":"key-10.3201\/eid3002.231142-202401121106-R3","doi-asserted-by":"publisher","first-page":"527","DOI":"10.1638\/04-051.1","article-title":"Geographic variation in marine turtle fibropapillomatosis.","volume":"36","author":"Greenblatt","year":"2005","journal-title":"J Zoo Wildl Med"},{"key":"key-10.3201\/eid3002.231142-202401121106-R4","doi-asserted-by":"publisher","first-page":"e1010258","DOI":"10.1371\/journal.ppat.1010258","article-title":"A novel group of negative-sense RNA viruses associated with epizootics in managed and free-ranging freshwater turtles in Florida, USA.","volume":"18","author":"Waltzek","year":"2022","journal-title":"PLoS Pathog"},{"key":"key-10.3201\/eid3002.231142-202401121106-R5","doi-asserted-by":"publisher","first-page":"95","DOI":"10.1038\/s43705-022-00180-x","article-title":"Revealing the uncharacterised diversity of amphibian and reptile viruses.","volume":"2","author":"Harding","year":"2022","journal-title":"ISME Commun"},{"key":"key-10.3201\/eid3002.231142-202401121106-R6","doi-asserted-by":"publisher","first-page":"1","DOI":"10.7554\/eLife.05378","article-title":"Unprecedented genomic diversity of RNA viruses in arthropods reveals the ancestry of negative-sense RNA viruses.","volume":"4","author":"Li","year":"2015","journal-title":"eLife"},{"key":"key-10.3201\/eid3002.231142-202401121106-R7","doi-asserted-by":"publisher","first-page":"197992","DOI":"10.1016\/j.virusres.2020.197992","article-title":"Leafhopper Psammotettix alienus hosts chuviruses with different genomic structures.","volume":"285","author":"Han","year":"2020","journal-title":"Virus Res"},{"key":"key-10.3201\/eid3002.231142-202401121106-R8","doi-asserted-by":"publisher","first-page":"539","DOI":"10.1038\/nature20167","article-title":"Redefining the invertebrate RNA virosphere.","volume":"540","author":"Shi","year":"2016","journal-title":"Nature"},{"key":"key-10.3201\/eid3002.231142-202401121106-R9","doi-asserted-by":"publisher","first-page":"197","DOI":"10.1038\/s41586-018-0012-7","article-title":"The evolutionary history of vertebrate RNA viruses.","volume":"556","author":"Shi","year":"2018","journal-title":"Nature"},{"key":"key-10.3201\/eid3002.231142-202401121106-R10","doi-asserted-by":"publisher","first-page":"1755","DOI":"10.1038\/s41396-020-0642-2","article-title":"Characterization of viruses in a tapeworm: phylogenetic position, vertical transmission, and transmission to the parasitized host.","volume":"14","author":"Hahn","year":"2020","journal-title":"ISME J"},{"key":"key-10.3201\/eid3002.231142-202401121106-R11","doi-asserted-by":"publisher","first-page":"542437","DOI":"10.3389\/fgene.2020.542437","article-title":"In and outs of Chuviridae endogenous viral elements: origin of a potentially new retrovirus and signature of ancient and ongoing arms race in mosquito genomes.","volume":"11","author":"Dezordi","year":"2020","journal-title":"Front Genet"},{"key":"key-10.3201\/eid3002.231142-202401121106-R12","doi-asserted-by":"publisher","first-page":"e0195421","DOI":"10.1128\/aem.01954-21","article-title":"Jingchuvirales: a new taxonomical framework for a rapidly expanding order of unusual monjiviricete viruses broadly distributed among arthropod subphyla.","volume":"88","author":"Di Paola","year":"2022","journal-title":"Appl Environ Microbiol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R13","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1128\/JVI.00001-20","article-title":"Identification of reptarenaviruses, hartmaniviruses and a novel chuvirus in captive Brazilian native boa constrictors with boid inclusion body disease.","volume":"94","author":"Argenta","year":"2020","journal-title":"J Virol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R14","doi-asserted-by":"crossref","unstructured":"Concei\u00e7\u00e3o-Neto N, Yinda KC, Van Ranst M, Matthijnssens J. NetoVIR: modular approach to customize sample preparation procedures for viral metagenomics. In: Moya A, P\u00e9rez Brocal V, editors. The Human Virome In Molecular Biology. Totowa (NJ): Humana Press Inc.; 2018. p. 85\u201395.","DOI":"10.1007\/978-1-4939-8682-8_7"},{"key":"key-10.3201\/eid3002.231142-202401121106-R15","doi-asserted-by":"publisher","first-page":"8686","DOI":"10.1038\/s41598-018-26851-1","article-title":"Metagenomics detection and characterisation of viruses in faecal samples from Australian wild birds.","volume":"8","author":"Vibin","year":"2018","journal-title":"Sci Rep"},{"key":"key-10.3201\/eid3002.231142-202401121106-R16","doi-asserted-by":"publisher","first-page":"e0046622","DOI":"10.1128\/aem.00466-22","article-title":"Putative novel avian paramyxovirus (AMPV) and reidentification of APMV-2 and APMV-6 to the species level based on wild bird surveillance (United States, 2016\u20132018).","volume":"88","author":"Young","year":"2022","journal-title":"Appl Environ Microbiol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R17","doi-asserted-by":"publisher","first-page":"202","DOI":"10.1177\/1040638720981019","article-title":"Randomly primed, strand-switching, MinION-based sequencing for the detection and characterization of cultured RNA viruses.","volume":"33","author":"Young","year":"2021","journal-title":"J Vet Diagn Invest"},{"key":"key-10.3201\/eid3002.231142-202401121106-R18","doi-asserted-by":"publisher","first-page":"1721","DOI":"10.1101\/gr.210641.116","article-title":"Centrifuge: rapid and sensitive classification of metagenomic sequences.","volume":"26","author":"Kim","year":"2016","journal-title":"Genome Res"},{"key":"key-10.3201\/eid3002.231142-202401121106-R19","doi-asserted-by":"publisher","first-page":"540","DOI":"10.1038\/s41587-019-0072-8","article-title":"Assembly of long, error-prone reads using repeat graphs.","volume":"37","author":"Kolmogorov","year":"2019","journal-title":"Nat Biotechnol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R20","doi-asserted-by":"publisher","first-page":"257","DOI":"10.1186\/s13059-019-1891-0","article-title":"Improved metagenomic analysis with Kraken 2.","volume":"20","author":"Wood","year":"2019","journal-title":"Genome Biol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R21","doi-asserted-by":"publisher","first-page":"455","DOI":"10.1089\/cmb.2012.0021","article-title":"SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.","volume":"19","author":"Bankevich","year":"2012","journal-title":"J Comput Biol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R22","doi-asserted-by":"publisher","first-page":"3429","DOI":"10.1093\/nar\/gkg599","article-title":"Vienna RNA secondary structure server.","volume":"31","author":"Hofacker","year":"2003","journal-title":"Nucleic Acids Res"},{"key":"key-10.3201\/eid3002.231142-202401121106-R23","doi-asserted-by":"publisher","first-page":"1547","DOI":"10.1093\/molbev\/msy096","article-title":"MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms.","volume":"35","author":"Kumar","year":"2018","journal-title":"Mol Biol Evol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R24","doi-asserted-by":"publisher","first-page":"1666","DOI":"10.1128\/jcm.34.7.1666-1671.1996","article-title":"Detection and analysis of diverse herpesviral species by consensus primer PCR.","volume":"34","author":"VanDevanter","year":"1996","journal-title":"J Clin Microbiol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R25","unstructured":"Byles RA. Behavior and ecology of sea turtles from Chesapeake Bay, Behavior and ecology of sea turtles from Chesapeake Bay, Virginia [dissertation]. Williamsburg (VA): College of William and Mary; 1988."},{"key":"key-10.3201\/eid3002.231142-202401121106-R26","doi-asserted-by":"publisher","first-page":"188","DOI":"10.2307\/1562744","article-title":"The occurrence of barnacles on the alligator snapping turtle, Macrochelys temminckii (Troost).","volume":"5","author":"Jackson","year":"1971","journal-title":"J Herpetol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R27","doi-asserted-by":"publisher","first-page":"2431","DOI":"10.1093\/nar\/8.11.2431","article-title":"Nucleotide sequences at the terminal of La Crosse virus RNAs.","volume":"8","author":"Obijeski","year":"1980","journal-title":"Nucleic Acids Res"},{"key":"key-10.3201\/eid3002.231142-202401121106-R28","doi-asserted-by":"publisher","first-page":"8140","DOI":"10.1073\/pnas.84.22.8140","article-title":"Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle.","volume":"84","author":"Hsu","year":"1987","journal-title":"Proc Natl Acad Sci U S A"},{"key":"key-10.3201\/eid3002.231142-202401121106-R29","doi-asserted-by":"publisher","first-page":"897","DOI":"10.1128\/jvi.52.3.897-904.1984","article-title":"Sequencing studies of pichinde arenavirus S RNA indicate a novel coding strategy, an ambisense viral S RNA.","volume":"52","author":"Auperin","year":"1984","journal-title":"J Virol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R30","doi-asserted-by":"publisher","first-page":"4092","DOI":"10.1128\/jvi.68.6.4092-4096.1994","article-title":"The influenza virus panhandle is involved in the initiation of transcription.","volume":"68","author":"Fodor","year":"1994","journal-title":"J Virol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R31","doi-asserted-by":"publisher","first-page":"1709","DOI":"10.1099\/0022-1317-76-7-1709","article-title":"Mutational analysis of influenza virus promoter elements in vivo.","volume":"76","author":"Neumann","year":"1995","journal-title":"J Gen Virol"},{"key":"key-10.3201\/eid3002.231142-202401121106-R32","first-page":"1046","article-title":"Promoter elements in the influenza vRNA terminal structure.","volume":"2","author":"Flick","year":"1996","journal-title":"RNA"},{"key":"key-10.3201\/eid3002.231142-202401121106-R33","doi-asserted-by":"publisher","first-page":"627654","DOI":"10.3389\/fpubh.2021.627654","article-title":"Implications of zoonoses from hunting and use of wildlife in North American arctic and boreal biomes: pandemic potential, monitoring, and mitigation.","volume":"9","author":"Keatts","year":"2021","journal-title":"Front Public Health"},{"key":"key-10.3201\/eid3002.231142-202401121106-R34","doi-asserted-by":"publisher","first-page":"18","DOI":"10.1128\/CMR.9.1.18","article-title":"Sequence-based identification of microbial pathogens: a reconsideration of Koch\u2019s postulates.","volume":"9","author":"Fredricks","year":"1996","journal-title":"Clin Microbiol Rev"},{"key":"key-10.3201\/eid3002.231142-202401121106-R35","doi-asserted-by":"publisher","first-page":"367","DOI":"10.2307\/1447430","article-title":"Application of life-history theory and population model analysis to turtle conservation.","volume":"1998","author":"Heppell","year":"1998","journal-title":"Copeia"},{"key":"key-10.3201\/eid3002.231142-202401121106-R36","doi-asserted-by":"publisher","first-page":"141","DOI":"10.11646\/zootaxa.3786.2.4","article-title":"Taxonomic assessment of Alligator Snapping Turtles (Chelydridae: Macrochelys), with the description of two new species from the southeastern United States.","volume":"3786","author":"Thomas","year":"2014","journal-title":"Zootaxa"},{"key":"key-10.3201\/eid3002.231142-202401121106-R37","doi-asserted-by":"publisher","first-page":"447","DOI":"10.11646\/zootaxa.3947.3.11","article-title":"Evaluating recent taxonomic changes for alligator snapping turtles (Testudines: Chelydridae).","volume":"3947","author":"Folt","year":"2015","journal-title":"Zootaxa"}],"container-title":["Emerging Infectious Diseases"],"original-title":[],"link":[{"URL":"https:\/\/wwwnc.cdc.gov\/eid\/article\/30\/2\/23-1142_article","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,11,29]],"date-time":"2024-11-29T13:37:16Z","timestamp":1732887436000},"score":1,"resource":{"primary":{"URL":"https:\/\/wwwnc.cdc.gov\/eid\/article\/30\/2\/23-1142_article"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,2]]},"references-count":37,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2023,2]]}},"URL":"https:\/\/doi.org\/10.3201\/eid3002.231142","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2023.02.24.528524","asserted-by":"object"}]},"ISSN":["1080-6040","1080-6059"],"issn-type":[{"value":"1080-6040","type":"print"},{"value":"1080-6059","type":"electronic"}],"subject":[],"published":{"date-parts":[[2023,2]]}}}