{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,18]],"date-time":"2026-08-18T00:26:09Z","timestamp":1787012769697,"version":"build-2736575974"},"reference-count":40,"publisher":"Centers for Disease Control and Prevention (CDC)","issue":"9","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Emerg. Infect. Dis."],"published-print":{"date-parts":[[2026,9]]},"DOI":"10.3201\/eid3209.251817","type":"journal-article","created":{"date-parts":[[2026,8,17]],"date-time":"2026-08-17T23:47:42Z","timestamp":1787010462000},"source":"Crossref","is-referenced-by-count":0,"title":["Invasive\n                    <i>Wickerhamomyces anomalus<\/i>\n                    Infections among Injecting Drug Users, France, 2012\u201320241"],"prefix":"10.3201","volume":"32","author":[{"given":"Maxime","family":"Lefranc","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Adrien","family":"Pain","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fr\u00e9deric","family":"Dalle","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pierre","family":"Baudino","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Claudio","family":"Plaisant","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Taieb","family":"Chouaki","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Josephine","family":"Dorin","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anne-Pauline","family":"Bellanger","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Julie","family":"Bonhomme","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Maxime","family":"Moniot","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Celia","family":"Rouges","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fran\u00e7oise","family":"Botterel","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gregoire","family":"Pasquier","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lilia","family":"Hasseine","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Estelle","family":"Perraud-Cateau","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jean-Pierre","family":"Gangneux","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Laurence","family":"Delhaes","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Damien","family":"Costa","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Juliette","family":"Guitard","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alexandre","family":"Alanio","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Valerie","family":"Letscher-Bru","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Emilie","family":"Guemas","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Guillaume","family":"Desoubeaux","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Karine","family":"Boukris-Sitbon","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Olivier","family":"Lortholary","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fanny","family":"Lanternier","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"name":"WAIT-IV Study Group,","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marie","family":"Desnos-Ollivier","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sebastien","family":"Imbert","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1822","reference":[{"key":"key-10.3201\/eid3209.251817-202608171946-R1","doi-asserted-by":"publisher","first-page":"13","DOI":"10.1007\/s10482-010-9505-6","article-title":"Phylogeny of the ascomycetous yeasts and the renaming of Pichia anomala to Wickerhamomyces anomalus.","volume":"99","author":"Kurtzman","year":"2011","journal-title":"Antonie van Leeuwenhoek"},{"key":"key-10.3201\/eid3209.251817-202608171946-R2","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1111\/j.1567-1364.2005.00004.x","article-title":"Biotechnology, physiology, and genetics of the yeast Pichia anomala.","volume":"6","author":"Passoth","year":"2006","journal-title":"FEMS Yeast Res"},{"key":"key-10.3201\/eid3209.251817-202608171946-R3","doi-asserted-by":"publisher","first-page":"977","DOI":"10.3390\/fermentation9110977","article-title":"Modulation of the aromatic profile of Verdejo wine through sequential inoculation of Wickerhamomyces anomalus and Saccharomyces cerevisiae.","volume":"9","author":"L\u00f3pez-Enr\u00edquez","year":"2023","journal-title":"Fermentation (Basel)"},{"key":"key-10.3201\/eid3209.251817-202608171946-R4","doi-asserted-by":"publisher","first-page":"e0092022","DOI":"10.1128\/mbio.00920-22","article-title":"Active surveillance program to increase awareness on invasive fungal diseases: the French RESSIF Network (2012 to 2018).","volume":"13","author":"Bretagne","year":"2022","journal-title":"mBio"},{"key":"key-10.3201\/eid3209.251817-202608171946-R5","doi-asserted-by":"publisher","first-page":"e01827","DOI":"10.1128\/AAC.01827-20","article-title":"Monitoring the epidemiology and antifungal resistance of yeasts causing fungemia in a tertiary care hospital in Madrid, Spain: any relevant changes in the last 13 years?","volume":"65","author":"D\u00edaz-Garc\u00eda","year":"2021","journal-title":"Antimicrob Agents Chemother"},{"key":"key-10.3201\/eid3209.251817-202608171946-R6","doi-asserted-by":"publisher","first-page":"1401","DOI":"10.3389\/fmicb.2020.01401","article-title":"Prevalence and antifungal susceptibility of pathogenic yeasts in China: a 10-year retrospective study in a teaching hospital.","volume":"11","author":"Song","year":"2020","journal-title":"Front Microbiol"},{"key":"key-10.3201\/eid3209.251817-202608171946-R7","doi-asserted-by":"publisher","first-page":"456","DOI":"10.1016\/j.jmii.2012.07.013","article-title":"Reporting an outbreak of Candida pelliculosa fungemia in a neonatal intensive care unit.","volume":"46","author":"Lin","year":"2013","journal-title":"J Microbiol Immunol Infect"},{"key":"key-10.3201\/eid3209.251817-202608171946-R8","doi-asserted-by":"publisher","first-page":"553","DOI":"10.1086\/502583","article-title":"An outbreak of Pichia anomala fungemia in a Brazilian pediatric intensive care unit.","volume":"26","author":"Pasqualotto","year":"2005","journal-title":"Infect Control Hosp Epidemiol"},{"key":"key-10.3201\/eid3209.251817-202608171946-R9","doi-asserted-by":"publisher","first-page":"291","DOI":"10.1016\/S0140-6736(86)90827-5","article-title":"Infection and colonisation of neonates by Hansenula anomala.","volume":"1","author":"Murphy","year":"1986","journal-title":"Lancet"},{"key":"key-10.3201\/eid3209.251817-202608171946-R10","doi-asserted-by":"publisher","first-page":"1702","DOI":"10.1128\/JCM.39.5.1702-1706.2001","article-title":"Outbreak of Pichia anomala infection in the pediatric service of a tertiary-care center in northern India.","volume":"39","author":"Chakrabarti","year":"2001","journal-title":"J Clin Microbiol"},{"key":"key-10.3201\/eid3209.251817-202608171946-R11","doi-asserted-by":"publisher","first-page":"870","DOI":"10.3855\/jidc.12103","article-title":"Two different clones of Candida pelliculosa bloodstream infection in a tertiary neonatal intensive care unit.","volume":"15","author":"Yang","year":"2021","journal-title":"J Infect Dev Ctries"},{"key":"key-10.3201\/eid3209.251817-202608171946-R12","doi-asserted-by":"publisher","first-page":"175","DOI":"10.1007\/s11046-012-9605-0","article-title":"Fungemia by Candida pelliculosa (Pichia anomala) in a neonatal intensive care unit: a possible clonal origin.","volume":"175","author":"da Silva","year":"2013","journal-title":"Mycopathologia"},{"key":"key-10.3201\/eid3209.251817-202608171946-R13","doi-asserted-by":"publisher","first-page":"794","DOI":"10.1016\/j.jmii.2017.05.005","article-title":"Investigation of a nosocomial outbreak of\u00a0fungemia caused by Candida pelliculosa (Pichia anomala) in a Korean tertiary care center.","volume":"51","author":"Jung","year":"2018","journal-title":"J Microbiol Immunol Infect"},{"key":"key-10.3201\/eid3209.251817-202608171946-R14","doi-asserted-by":"publisher","first-page":"744502","DOI":"10.3389\/fmicb.2021.744502","article-title":"Investigation of the emerging nosocomial Wickerhamomyces anomalus infections at a Chinese tertiary teaching hospital and a systemic review: clinical manifestations, risk factors, treatment, outcomes, and anti-fungal susceptibility.","volume":"12","author":"Zhang","year":"2021","journal-title":"Front Microbiol"},{"key":"key-10.3201\/eid3209.251817-202608171946-R15","doi-asserted-by":"publisher","first-page":"193","DOI":"10.1111\/j.1439-0507.1997.tb00213.x","article-title":"Fungaemia caused by Hansenula anomala\u2014an outbreak in a cancer hospital.","volume":"40","author":"Thuler","year":"1997","journal-title":"Mycoses"},{"key":"key-10.3201\/eid3209.251817-202608171946-R16","doi-asserted-by":"publisher","first-page":"665","DOI":"10.5578\/mb.20219718","article-title":"A case of peritonitis caused by Wickerhamomyces anomalus (Candida pelliculosa) related to peritoneal dialysis","volume":"55","author":"Evren","year":"2021","journal-title":"Mikrobiyol Bul"},{"key":"key-10.3201\/eid3209.251817-202608171946-R17","doi-asserted-by":"publisher","first-page":"8847853","DOI":"10.1155\/2020\/8847853","article-title":"Wickerhamomyces anomalous: a rare cause of fungemia causing febrile neutropenia in acute lymphoblastic leukemia.","volume":"2020","author":"Mehta","year":"2020","journal-title":"Case Rep Infect Dis"},{"key":"key-10.3201\/eid3209.251817-202608171946-R18","doi-asserted-by":"publisher","first-page":"101365","DOI":"10.1016\/j.lanepe.2025.101365","article-title":"Yeast fungaemia among injection drug users in France (2012\u20132022): a cross-sectional observational study.","volume":"55","author":"Paccoud","year":"2025","journal-title":"Lancet Reg Health Eur"},{"key":"key-10.3201\/eid3209.251817-202608171946-R19","doi-asserted-by":"publisher","first-page":"806","DOI":"10.1136\/bmj.39335.541782.AD","article-title":"Strengthening the Reporting of Observational Studies in Epidemiology (STROBE) statement: guidelines for reporting observational studies.","volume":"335","author":"von Elm","year":"2007","journal-title":"BMJ"},{"key":"key-10.3201\/eid3209.251817-202608171946-R20","doi-asserted-by":"publisher","first-page":"331","DOI":"10.1023\/A:1001761008817","article-title":"Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences.","volume":"73","author":"Kurtzman","year":"1998","journal-title":"Antonie van Leeuwenhoek"},{"key":"key-10.3201\/eid3209.251817-202608171946-R21","unstructured":"Guinea J, Meletiadis J, Arikan-Akdagli S, Giske C, Muehlethaler K, Arendrup MC. Method for the determination of broth dilution minimum inhibitory concentrations of antifungal agents for yeasts. 2023 [cited 2025 Nov 19]. https:\/\/www.eucast.org\/fileadmin\/eucast\/pdf\/AFST\/methodology\/EUCAST_E.Def_7.4_Yeast_definitive_revised_2023.pdf"},{"key":"key-10.3201\/eid3209.251817-202608171946-R22","doi-asserted-by":"publisher","first-page":"1525","DOI":"10.3390\/microorganisms11061525","article-title":"Application of novel short tandem repeat typing for Wickerhamomyces anomalus reveals simultaneous outbreaks within a single hospital.","volume":"11","author":"Spruijtenburg","year":"2023","journal-title":"Microorganisms"},{"key":"key-10.3201\/eid3209.251817-202608171946-R23","doi-asserted-by":"publisher","first-page":"e281","DOI":"10.7717\/peerj.281","article-title":"Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and\/or sexual reproduction.","volume":"2","author":"Kamvar","year":"2014","journal-title":"PeerJ"},{"key":"key-10.3201\/eid3209.251817-202608171946-R24","doi-asserted-by":"publisher","first-page":"W293\u20136","DOI":"10.1093\/nar\/gkab301","article-title":"Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation.","volume":"49","author":"Letunic","year":"2021","journal-title":"Nucleic Acids Res"},{"key":"key-10.3201\/eid3209.251817-202608171946-R25","doi-asserted-by":"publisher","first-page":"3047","DOI":"10.1093\/bioinformatics\/btw354","article-title":"MultiQC: summarize analysis results for multiple tools and samples in a single report.","volume":"32","author":"Ewels","year":"2016","journal-title":"Bioinformatics"},{"key":"key-10.3201\/eid3209.251817-202608171946-R26","doi-asserted-by":"publisher","first-page":"500","DOI":"10.1016\/j.ygeno.2013.07.011","article-title":"AlienTrimmer: a tool to quickly and accurately trim off multiple short contaminant sequences from high-throughput sequencing reads.","volume":"102","author":"Criscuolo","year":"2013","journal-title":"Genomics"},{"key":"key-10.3201\/eid3209.251817-202608171946-R27","doi-asserted-by":"publisher","first-page":"44","DOI":"10.1111\/1755-0998.12549","article-title":"vcfr: a package to manipulate and visualize variant call format data in R.","volume":"17","author":"Knaus","year":"2017","journal-title":"Mol Ecol Resour"},{"key":"key-10.3201\/eid3209.251817-202608171946-R28","doi-asserted-by":"publisher","first-page":"289","DOI":"10.1093\/bioinformatics\/btg412","article-title":"APE: Analyses of Phylogenetics and Evolution in R language.","volume":"20","author":"Paradis","year":"2004","journal-title":"Bioinformatics"},{"key":"key-10.3201\/eid3209.251817-202608171946-R29","doi-asserted-by":"publisher","first-page":"e102","DOI":"10.1002\/cpbi.102","article-title":"Using SPAdes de novo assembler.","volume":"70","author":"Prjibelski","year":"2020","journal-title":"Curr Protoc Bioinformatics"},{"key":"key-10.3201\/eid3209.251817-202608171946-R30","doi-asserted-by":"publisher","first-page":"W601\u20136","DOI":"10.1093\/nar\/gkad406","article-title":"WebQUAST: online evaluation of genome assemblies.","volume":"51","author":"Mikheenko","year":"2023","journal-title":"Nucleic Acids Res"},{"key":"key-10.3201\/eid3209.251817-202608171946-R31","doi-asserted-by":"crossref","unstructured":"Wickham H. Data analysis. In: ggplot2. Use R! 2nd ed. Cham (Switzerland): Springer International Publishing; 2016. p. 189\u2013201.","DOI":"10.1007\/978-3-319-24277-4_9"},{"key":"key-10.3201\/eid3209.251817-202608171946-R32","doi-asserted-by":"publisher","first-page":"631","DOI":"10.3201\/eid2404.171807","article-title":"Reemergence of intravenous drug use as risk factor for candidemia, Massachusetts, USA.","volume":"24","author":"Poowanawittayakom","year":"2018","journal-title":"Emerg Infect Dis"},{"key":"key-10.3201\/eid3209.251817-202608171946-R33","doi-asserted-by":"publisher","first-page":"S442","DOI":"10.1093\/infdis\/jiaa024","article-title":"Injection drug use-associated candidemia: incidence, clinical features, and outcomes, east Tennessee, 2014\u20132018.","volume":"222","author":"Rossow","year":"2020","journal-title":"J Infect Dis"},{"key":"key-10.3201\/eid3209.251817-202608171946-R34","doi-asserted-by":"publisher","first-page":"165","DOI":"10.1016\/0002-9343(87)90400-1","article-title":"Infective endocarditis of a bicuspid aortic valve caused by Hansenula anomala.","volume":"82","author":"Nohinek","year":"1987","journal-title":"Am J Med"},{"key":"key-10.3201\/eid3209.251817-202608171946-R35","doi-asserted-by":"publisher","first-page":"1732","DOI":"10.1093\/cid\/ciz1061","article-title":"The changing epidemiology of candidemia in the United States: injection drug use as an increasingly common risk factor-active surveillance in selected sites, United States, 2014\u20132017.","volume":"71","author":"Zhang","year":"2020","journal-title":"Clin Infect Dis"},{"key":"key-10.3201\/eid3209.251817-202608171946-R36","doi-asserted-by":"publisher","first-page":"857","DOI":"10.1093\/infdis\/156.5.857","article-title":"Systemic candidiasis in Spanish heroin addicts: a possible source of infection.","volume":"156","author":"Mir\u00f3","year":"1987","journal-title":"J Infect Dis"},{"key":"key-10.3201\/eid3209.251817-202608171946-R37","doi-asserted-by":"publisher","first-page":"1964","DOI":"10.1093\/jac\/dkaf156","article-title":"High azole non-wild type rates and nosocomial microsatellite typing aggregation of Wickerhamomyces anomalus in China according to a 12-year multicenter surveillance study.","volume":"80","author":"Luo","year":"2025","journal-title":"J Antimicrob Chemother"},{"key":"key-10.3201\/eid3209.251817-202608171946-R38","doi-asserted-by":"publisher","first-page":"e00662","DOI":"10.7554\/eLife.00662","article-title":"The evolution of drug resistance in clinical isolates of Candida albicans.","volume":"4","author":"Ford","year":"2015","journal-title":"eLife"},{"key":"key-10.3201\/eid3209.251817-202608171946-R39","doi-asserted-by":"publisher","first-page":"e01205","DOI":"10.1128\/mBio.01205-18","article-title":"The genome of the human pathogen Candida albicans is shaped by mutation and cryptic sexual recombination.","volume":"9","author":"Wang","year":"2018","journal-title":"mBio"},{"key":"key-10.3201\/eid3209.251817-202608171946-R40","doi-asserted-by":"publisher","first-page":"2223","DOI":"10.1128\/AAC.48.6.2223-2227.2004","article-title":"Clade-specific flucytosine resistance is due to a single nucleotide change in the FUR1 gene of Candida albicans.","volume":"48","author":"Dodgson","year":"2004","journal-title":"Antimicrob Agents Chemother"}],"container-title":["Emerging Infectious Diseases"],"original-title":[],"deposited":{"date-parts":[[2026,8,17]],"date-time":"2026-08-17T23:47:43Z","timestamp":1787010463000},"score":1,"resource":{"primary":{"URL":"https:\/\/wwwnc.cdc.gov\/eid\/article\/32\/9\/25-1817_article"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,9]]},"references-count":40,"journal-issue":{"issue":"9","published-print":{"date-parts":[[2026,9]]}},"URL":"https:\/\/doi.org\/10.3201\/eid3209.251817","relation":{},"ISSN":["1080-6040","1080-6059"],"issn-type":[{"value":"1080-6040","type":"print"},{"value":"1080-6059","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,9]]}}}