{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,5,14]],"date-time":"2024-05-14T09:47:12Z","timestamp":1715680032811},"reference-count":0,"publisher":"IOS Press","license":[{"start":{"date-parts":[[2022,6,6]],"date-time":"2022-06-06T00:00:00Z","timestamp":1654473600000},"content-version":"unspecified","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2022,6,6]]},"abstract":"<jats:p>This study leveraged the phylogenetic analysis of more than 10K strains of novel coronavirus (SARS-CoV-2) from 67 countries. Due to the requirement of high-end computational power for phylogenetic analysis, we leverage a fast yet highly accurate alignment-free method to develop the phylogenetic tree out of all the strains of novel coronavirus. K-Means clustering and PCA-based dimension reduction technique were used to identify a representative strain from each location. The resulting phylogenetic tree was able to highlight evolutionary relationships of SARS-CoV-2 genome and, subsequently, linked to the interpretation of facts and figures across the globe for the spread of COVID-19. Our analysis revealed that the geographical boundaries could not be explained by the phylogenetic analysis of novel coronavirus as it placed different countries from Asia, Europe and the USA in very close proximity in the tree. Instead, the commute of people from one country to another is the key to the spread of COVID-19. We believe our study will support the policymakers to contain the spread of COVID-19 globally.<\/jats:p>","DOI":"10.3233\/shti220174","type":"book-chapter","created":{"date-parts":[[2022,6,7]],"date-time":"2022-06-07T09:33:32Z","timestamp":1654594412000},"source":"Crossref","is-referenced-by-count":1,"title":["Phylogenetic Analyses of SARS-CoV-2 Strains Reveal Its Link to the Spread of COVID-19 Across the Globe"],"prefix":"10.3233","author":[{"given":"Shashata","family":"Sawmya","sequence":"first","affiliation":[{"name":"Department of CSE, Bangladesh University of Engineering and Technolog, West Palashi, Dhaka-1205, Bangladesh"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Arpita","family":"Saha","sequence":"additional","affiliation":[{"name":"Department of CSE, Bangladesh University of Engineering and Technolog, West Palashi, Dhaka-1205, Bangladesh"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sadia","family":"Tasnim","sequence":"additional","affiliation":[{"name":"Department of CSE, Bangladesh University of Engineering and Technolog, West Palashi, Dhaka-1205, Bangladesh"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Naser","family":"Anjum","sequence":"additional","affiliation":[{"name":"Department of CSE, Bangladesh University of Engineering and Technolog, West Palashi, Dhaka-1205, Bangladesh"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Md.","family":"Toufikuzzaman","sequence":"additional","affiliation":[{"name":"Department of CSE, Bangladesh University of Engineering and Technolog, West Palashi, Dhaka-1205, Bangladesh"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ali Haisam Muhamad","family":"Rafid","sequence":"additional","affiliation":[{"name":"Department of CSE, Bangladesh University of Engineering and Technolog, West Palashi, Dhaka-1205, Bangladesh"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mohammad Saifur","family":"Rahman","sequence":"additional","affiliation":[{"name":"Department of CSE, Bangladesh University of Engineering and Technolog, West Palashi, Dhaka-1205, Bangladesh"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"M. Sohel","family":"Rahman","sequence":"additional","affiliation":[{"name":"Department of CSE, Bangladesh University of Engineering and Technolog, West Palashi, Dhaka-1205, Bangladesh"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Tanvir","family":"Alam","sequence":"additional","affiliation":[{"name":"College of Science and Engineering, Hamad Bin Khalifa University, Doha 34110, Qatar"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"7437","container-title":["Studies in Health Technology and Informatics","MEDINFO 2021: One World, One Health \u2013 Global Partnership for Digital Innovation"],"original-title":[],"link":[{"URL":"https:\/\/ebooks.iospress.nl\/pdf\/doi\/10.3233\/SHTI220174","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,6,7]],"date-time":"2022-06-07T09:33:42Z","timestamp":1654594422000},"score":1,"resource":{"primary":{"URL":"https:\/\/ebooks.iospress.nl\/doi\/10.3233\/SHTI220174"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022,6,6]]},"references-count":0,"URL":"https:\/\/doi.org\/10.3233\/shti220174","relation":{},"ISSN":["0926-9630","1879-8365"],"issn-type":[{"value":"0926-9630","type":"print"},{"value":"1879-8365","type":"electronic"}],"subject":[],"published":{"date-parts":[[2022,6,6]]}}}