{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,18]],"date-time":"2025-11-18T01:17:56Z","timestamp":1763428676569,"version":"3.40.5"},"reference-count":0,"publisher":"IOS Press","isbn-type":[{"type":"print","value":"9781643683881"},{"type":"electronic","value":"9781643683898"}],"license":[{"start":{"date-parts":[[2023,5,18]],"date-time":"2023-05-18T00:00:00Z","timestamp":1684368000000},"content-version":"unspecified","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2023,5,18]]},"abstract":"<jats:p>FHIR is a widely accepted interoperability standard for exchanging medical data, but data transformation from the primary health information systems into FHIR is usually challenging and requires advanced technical skills and infrastructure. There is a critical need for low-cost solutions, and using Mirth Connect as an open-source tool provides this opportunity. We developed a reference implementation to transform data from CSV (the most common data format) into FHIR resources using Mirth Connect without any advanced technical resources or programming skills. This reference implementation is tested successfully for both quality and performance, and it enables reproducing and improving the implemented approach by healthcare providers to transform raw data into FHIR resources. For ensuring replicability, the used channel, mapping, and templates are available publicly on GitHub (https:\/\/github.com\/alkarkoukly\/CSV-FHIR-Transformer).<\/jats:p>","DOI":"10.3233\/shti230061","type":"book-chapter","created":{"date-parts":[[2023,5,19]],"date-time":"2023-05-19T04:42:24Z","timestamp":1684471344000},"source":"Crossref","is-referenced-by-count":4,"title":["Breaking Barriers for Interoperability: A Reference Implementation of CSV-FHIR Transformation Using Open-Source Tools"],"prefix":"10.3233","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1891-1366","authenticated-orcid":false,"given":"Samer","family":"Alkarkoukly","sequence":"first","affiliation":[{"name":"Institute for Biomedical Informatics, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany"},{"name":"CECAD, University of Cologne and University Hospital Cologne, Cologne, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5506-4875","authenticated-orcid":false,"given":"Md. Mostafa","family":"Kamal","sequence":"additional","affiliation":[{"name":"Institute for Biomedical Informatics, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany"},{"name":"CECAD, University of Cologne and University Hospital Cologne, Cologne, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7611-3501","authenticated-orcid":false,"given":"Oya","family":"Beyan","sequence":"additional","affiliation":[{"name":"Institute for Biomedical Informatics, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany"},{"name":"Department of Data Science and Artificial Intelligence, Fraunhofer FIT, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"7437","container-title":["Studies in Health Technology and Informatics","Caring is Sharing \u2013 Exploiting the Value in Data for Health and Innovation"],"original-title":[],"link":[{"URL":"https:\/\/ebooks.iospress.nl\/pdf\/doi\/10.3233\/SHTI230061","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,5,31]],"date-time":"2023-05-31T10:55:44Z","timestamp":1685530544000},"score":1,"resource":{"primary":{"URL":"https:\/\/ebooks.iospress.nl\/doi\/10.3233\/SHTI230061"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,5,18]]},"ISBN":["9781643683881","9781643683898"],"references-count":0,"URL":"https:\/\/doi.org\/10.3233\/shti230061","relation":{},"ISSN":["0926-9630","1879-8365"],"issn-type":[{"type":"print","value":"0926-9630"},{"type":"electronic","value":"1879-8365"}],"subject":[],"published":{"date-parts":[[2023,5,18]]}}}