{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,24]],"date-time":"2026-02-24T10:05:54Z","timestamp":1771927554845,"version":"3.50.1"},"reference-count":24,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2026,1,27]],"date-time":"2026-01-27T00:00:00Z","timestamp":1769472000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Bioinform."],"abstract":"<jats:sec>\n                    <jats:title>Background<\/jats:title>\n                    <jats:p>Lumbrokinase is a novel antithrombotic drug isolated and purified from earthworms and used in the treatment of stroke and cardiovascular disease. However, to date, there has been no systematic classification of lumbrokinase genes.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>\n                      In this study, a new member of the lumbrokinase gene family\n                      <jats:italic>LUKA<\/jats:italic>\n                      , which has not yet been reported, was cloned from\n                      <jats:italic>Eisenia andrei<\/jats:italic>\n                      by a homologous sequence method. The full-length cDNA sequence of\n                      <jats:italic>LUKA<\/jats:italic>\n                      was obtained through second-generation sequencing. The gene and protein were analyzed using various bioinformatics software tools.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>\n                      The molecular formula of LUKA was C\n                      <jats:sub>1347<\/jats:sub>\n                      H\n                      <jats:sub>2068<\/jats:sub>\n                      N\n                      <jats:sub>360<\/jats:sub>\n                      O\n                      <jats:sub>419<\/jats:sub>\n                      S\n                      <jats:sub>18<\/jats:sub>\n                      , indicating it is a stable protein. The amino acid sequence of LUKA contained high proportion of valine (10.2%) and serine (9.2%) and possessed a peptide signal along with the corresponding cleavage site.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusion<\/jats:title>\n                    <jats:p>Phylogenetic analysis showed that LUKA has multiple distinct amino acid sites compared with other lumbrokinases and represents a rare type of lumbrokinase. This study provides a new genetic material of rare lumbrokinase types.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.3389\/fbinf.2026.1736746","type":"journal-article","created":{"date-parts":[[2026,1,27]],"date-time":"2026-01-27T06:42:26Z","timestamp":1769496146000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":0,"title":["Identification and bioinformatics analysis of a novel member of the lumbrokinase gene family in earthworms"],"prefix":"10.3389","volume":"6","author":[{"given":"Xiong","family":"Rongchuan","sequence":"first","affiliation":[{"name":"School of Biological Science and Technology, Liupanshui Normal University","place":["Liupanshui, Guizhou, China"]}]},{"given":"Li","family":"Jianhong","sequence":"additional","affiliation":[{"name":"School of Biological Science and Technology, Liupanshui Normal University","place":["Liupanshui, Guizhou, China"]}]},{"given":"Liu","family":"Tingchang","sequence":"additional","affiliation":[{"name":"School of Biological Science and Technology, Liupanshui Normal University","place":["Liupanshui, Guizhou, China"]}]},{"given":"Su","family":"Chengyuan","sequence":"additional","affiliation":[{"name":"School of Biological Science and Technology, Liupanshui Normal University","place":["Liupanshui, Guizhou, China"]}]},{"given":"Chen","family":"Hong","sequence":"additional","affiliation":[{"name":"School of Biological Science and Technology, Liupanshui Normal University","place":["Liupanshui, Guizhou, China"]}]},{"given":"Chen","family":"Zhengpeng","sequence":"additional","affiliation":[{"name":"School of Biological Science and Technology, Liupanshui Normal University","place":["Liupanshui, Guizhou, China"]}]},{"given":"Tang","family":"Chaozhi","sequence":"additional","affiliation":[{"name":"School of Biological Science and Technology, Liupanshui Normal University","place":["Liupanshui, Guizhou, China"]}]},{"given":"Zhao","family":"Xinxia","sequence":"additional","affiliation":[{"name":"School of Biological Science and Technology, Liupanshui Normal University","place":["Liupanshui, Guizhou, China"]}]}],"member":"1965","published-online":{"date-parts":[[2026,1,27]]},"reference":[{"key":"B1","first-page":"1899","article-title":"Effects of earthworm ecotype and density on comprehensive quality of watered land soil","volume":"53","author":"Chen","year":"2022","journal-title":"J. South. Agric."},{"key":"B2","volume-title":"Molecular mechanisms and clinical implications of c-Met-mediated Fis1 phosphorylation induces mitochondrial fission to facilitate tumor metastasis in liver cancer","author":"Deng","year":"2021"},{"key":"B3","first-page":"1485","article-title":"Toxic effects of BTEX in water on Daphnia magna and Limnodrilus hoffmeisteri and safety assessment of the aquatic environment","volume":"29","author":"Fan","year":"2009","journal-title":"Acta Sci. Circumstantiae"},{"key":"B4","doi-asserted-by":"publisher","first-page":"440","DOI":"10.1186\/1472-6882-14-440","article-title":"Earthworm (Pheretima aspergillum) extract stimulates osteoblast activity and inhibits osteoclast differentiation","volume":"14","author":"Fu","year":"2014","journal-title":"BMC Complementary Altern. Med."},{"key":"B5","doi-asserted-by":"publisher","first-page":"109590","DOI":"10.1016\/j.isci.2024.109590","article-title":"Organisation and evolution of the major histocompatibility complex class I genes in cetaceans","volume":"27","author":"Grace","year":"2024","journal-title":"IScience"},{"key":"B6","doi-asserted-by":"publisher","first-page":"741","DOI":"10.3390\/biom14070741","article-title":"Lumbrokinase extracted from earthworms synergizes with bevacizumab and chemotherapeutics in treating non-small cell lung cancer by targeted inactivation of BPTF\/VEGF and NF-\u03baB\/COX-2 signaling","volume":"14","author":"Hua","year":"2024","journal-title":"Biomolecules"},{"key":"B7","first-page":"242","article-title":"Research progress on the relationship between the molecular structure of chicken MHC and disease resistance","volume":"51","author":"Jia","year":"2024","journal-title":"China Animal Husb. and Veterinary Med."},{"key":"B8","doi-asserted-by":"publisher","first-page":"e5116","DOI":"10.1002\/jms.5116","article-title":"Mass spectrometry-based proteomics in clinical diagnosis of amyloidosis and multiple myeloma: a review (2012-2024)","volume":"60","author":"Kratka","year":"2025","journal-title":"J. Mass Spectrom."},{"key":"B9","doi-asserted-by":"publisher","first-page":"140759","DOI":"10.1016\/j.ijbiomac.2025.140759","article-title":"Albumin as a functional carrier enhances solubilization, photodynamic and photothermal antibacterial therapy of curcumin","volume":"303","author":"Lai","year":"2025","journal-title":"Int. J. Biol. Macromol."},{"key":"B10","doi-asserted-by":"publisher","first-page":"417","DOI":"10.1006\/viro.2000.0357","article-title":"The HIV-1 Env protein signal sequence retards its cleavage and down-regulates the glycoprotein folding","volume":"272","author":"Li","year":"2000","journal-title":"Virology"},{"key":"B11","doi-asserted-by":"publisher","first-page":"e53110","DOI":"10.1371\/journal.pone.0053110","article-title":"Cloning, expression and characterization of a gene from earthworm Eisenia fetida encoding a blood-clot dissolving protein","volume":"7","author":"Li","year":"2012","journal-title":"PLoS ONE"},{"key":"B12","first-page":"407","article-title":"Mouse liver phosphoproteome methodology optimization and kinase analysis","volume":"39","author":"Lin","year":"2015","journal-title":"Mil. Med. Sci."},{"key":"B13","volume-title":"Study on the role and mechanism of cell cycle regulation by phosphorylation of Cables1 protein by AKT kinase in tumor therapy","author":"Shi","year":"2019"},{"key":"B14","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.ecoleng.2016.01.072","article-title":"Earthworm as ecological engineers to change the physico-chemical properties of soil: soil vs vermicast","volume":"90","author":"Singh","year":"2016","journal-title":"Ecol. Eng."},{"key":"B15","doi-asserted-by":"publisher","first-page":"1151","DOI":"10.1016\/j.jgg.2022.03.006","article-title":"Recombination and mutation shape variations in the major histocompatibility complex","volume":"49","author":"Sun","year":"2022","journal-title":"J. Genet. Genomics"},{"key":"B16","doi-asserted-by":"publisher","first-page":"278","DOI":"10.1016\/j.actbio.2020.10.015","article-title":"Functionalized polymeric hybrid micelles as an efficient nanotheranostic agent for thrombus imaging and thrombolysis","volume":"122","author":"Wang","year":"2021","journal-title":"Acta Biomater."},{"key":"B17","volume-title":"Effects of inoculating earthworm to vegetable field on Soil,Plant and environment following organic amendments","author":"Wu","year":"2015"},{"key":"B18","volume-title":"Isolation, identification and mechanism study of antithrombotic component DPf3 from Trichotricha wilhelmii based on multi-omics model","author":"Wu","year":"2020"},{"key":"B19","volume-title":"A score based on tumor mutation load and major histocompatibility complex was constructed to predict immunotherapy efficacy and overall survival of gastric cancer","author":"Xiang","year":"2023"},{"key":"B20","volume-title":"Earthworms in China","author":"Xiao","year":"2023"},{"key":"B21","first-page":"83","article-title":"Research status on Pheretima anticoagulant active components","volume":"45","author":"Yang","year":"2017","journal-title":"J. Jianghan Univ. Sci. Ed."},{"key":"B22","first-page":"1","article-title":"Acute toxic effects of the perfluorooctane sulfonate pollutant on the earthworm Eisenia foetida","volume":"13","author":"Yao","year":"2013","journal-title":"J. Saf. Environ."},{"key":"B23","doi-asserted-by":"publisher","first-page":"26","DOI":"10.1186\/s13007-020-00571-y","article-title":"Pharmacodynamic material basis of traditional Chinese medicine based on biomacromolecules: a review","volume":"16","author":"Zhang","year":"2020","journal-title":"Plant Methods"},{"key":"B24","first-page":"270","article-title":"The relationship between major histocompatibility complex class II molecules and postmenopausal osteoporosis","volume":"30","author":"Zhang","year":"2024","journal-title":"Chin. J. Osteoporos."}],"container-title":["Frontiers in Bioinformatics"],"original-title":[],"link":[{"URL":"https:\/\/www.frontiersin.org\/articles\/10.3389\/fbinf.2026.1736746\/full","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,2,24]],"date-time":"2026-02-24T09:13:28Z","timestamp":1771924408000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.frontiersin.org\/articles\/10.3389\/fbinf.2026.1736746\/full"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,1,27]]},"references-count":24,"alternative-id":["10.3389\/fbinf.2026.1736746"],"URL":"https:\/\/doi.org\/10.3389\/fbinf.2026.1736746","relation":{},"ISSN":["2673-7647"],"issn-type":[{"value":"2673-7647","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,1,27]]},"article-number":"1736746"}}