{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,18]],"date-time":"2026-05-18T14:32:58Z","timestamp":1779114778023,"version":"3.51.4"},"reference-count":78,"publisher":"Frontiers Media SA","content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Cell. Infect. Microbiol."],"DOI":"10.3389\/fcimb.2017.00030","type":"journal-article","created":{"date-parts":[[2017,2,7]],"date-time":"2017-02-07T04:12:05Z","timestamp":1486440725000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":29,"title":["The Escherichia coli Serogroup O1 and O2 Lipopolysaccharides Are Encoded by Multiple O-antigen Gene Clusters"],"prefix":"10.3389","volume":"7","author":[{"given":"Sabine","family":"Delannoy","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Lothar","family":"Beutin","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Patricia","family":"Mariani-Kurkdjian","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Aubin","family":"Fleiss","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"St\u00e9phane","family":"Bonacorsi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Patrick","family":"Fach","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"1965","published-online":{"date-parts":[[2017,2,7]]},"reference":[{"key":"B1","doi-asserted-by":"crossref","first-page":"268","DOI":"10.1128\/IAI.51.1.268-276.1986","article-title":"Clonal analysis of Escherichia coli O2:K1 isolated from diseased humans and animals","volume":"51","author":"Achtman","year":"1986","journal-title":"Infect. Immun."},{"key":"B2","doi-asserted-by":"crossref","first-page":"315","DOI":"10.1128\/IAI.39.1.315-335.1983","article-title":"Six widespread bacterial clones among Escherichia coli K1 isolates","volume":"39","author":"Achtman","year":"1983","journal-title":"Infect. Immun."},{"key":"B3","doi-asserted-by":"publisher","first-page":"17","DOI":"10.1016\/S0966-842X(99)01646-7","article-title":"Serotype-converting bacteriophages and O-antigen modification in Shigella flexneri","volume":"8","author":"Allison","year":"2000","journal-title":"Trends Microbiol."},{"key":"B4","doi-asserted-by":"publisher","first-page":"161","DOI":"10.1080\/00071668.2015.1135502","article-title":"Isolation of atypical enteropathogenic Escherichia coli from chicken and chicken-derived products","volume":"57","author":"Alonso","year":"2016","journal-title":"Br. Poult. Sci."},{"key":"B5","doi-asserted-by":"publisher","first-page":"55","DOI":"10.1016\/S0147-9571(02)00015-2","article-title":"Serotypes of Escherichia coli isolated from healthy infants in Berlin, Germany and Melbourne, Australia","volume":"26","author":"Bettelheim","year":"2003","journal-title":"Comp. Immunol. Microbiol. Infect. Dis."},{"key":"B6","doi-asserted-by":"publisher","first-page":"135","DOI":"10.3389\/fmicb.2016.00135","article-title":"Genetic analysis and detection of fliCH1 and fliCH12 genes coding for serologically closely related flagellar antigens in human and animal pathogenic Escherichia coli","volume":"7","author":"Beutin","year":"2016","journal-title":"Front. Microbiol."},{"key":"B7","doi-asserted-by":"crossref","first-page":"2483","DOI":"10.1128\/JCM.31.9.2483-2488.1993","article-title":"Prevalence and some properties of verotoxin (Shiga-like toxin)-producing Escherichia coli in seven different species of healthy domestic animals","volume":"31","author":"Beutin","year":"1993","journal-title":"J. Clin. Microbiol."},{"key":"B8","doi-asserted-by":"publisher","first-page":"1099","DOI":"10.1128\/JCM.42.3.1099-1108.2004","article-title":"Characterization of Shiga toxin-producing Escherichia coli strains isolated from human patients in Germany over a 3-year period","volume":"42","author":"Beutin","year":"2004","journal-title":"J. Clin. Microbiol."},{"key":"B9","doi-asserted-by":"publisher","first-page":"4769","DOI":"10.1128\/AEM.00873-07","article-title":"Identification of human-pathogenic strains of Shiga toxin-producing Escherichia coli from food by a combination of serotyping and molecular typing of Shiga toxin genes","volume":"73","author":"Beutin","year":"2007","journal-title":"Appl. Environ. Microbiol."},{"key":"B10","doi-asserted-by":"publisher","first-page":"297","DOI":"10.1086\/518897","article-title":"Combined multilocus sequence typing and O serogrouping distinguishes Escherichia coli subtypes associated with infant urosepsis and\/or meningitis","volume":"196","author":"Bidet","year":"2007","journal-title":"J. Infect. Dis."},{"key":"B11","doi-asserted-by":"publisher","first-page":"311","DOI":"10.1128\/JCM.42.1.311-319.2004","article-title":"Serotypes, virulence genes, and intimin types of Shiga toxin (verotoxin)-producing Escherichia coli isolates from human patients: prevalence in Lugo, Spain, from 1992 through 1999","volume":"42","author":"Blanco","year":"2004","journal-title":"J. Clin. Microbiol."},{"key":"B12","doi-asserted-by":"publisher","first-page":"203","DOI":"10.1128\/AEM.01921-09","article-title":"Low-density macroarray targeting non-locus of enterocyte effacement effectors (nle genes) and major virulence factors of Shiga toxin-producing Escherichia coli (STEC): a new approach for molecular risk assessment of STEC isolates","volume":"76","author":"Bugarel","year":"2010","journal-title":"Appl. Environ. Microbiol."},{"key":"B13","doi-asserted-by":"publisher","first-page":"52","DOI":"10.1111\/1469-0691.12188","article-title":"Serotypes, genotypes and antimicrobial resistance patterns of human diarrhoeagenic Escherichia coli isolates circulating in southeastern China","volume":"20","author":"Chen","year":"2014","journal-title":"Clin. Microbiol. Infect."},{"key":"B14","doi-asserted-by":"publisher","first-page":"1661","DOI":"10.1007\/s10096-016-2707-8","article-title":"Trends in ExPEC serogroups in the UK and their significance","volume":"35","author":"Ciesielczuk","year":"2016","journal-title":"Eur. J. Clin. Microbiol. Infect. Dis."},{"key":"B15","doi-asserted-by":"publisher","first-page":"129","DOI":"10.1016\/j.diagmicrobio.2006.08.007","article-title":"Determination of Escherichia coli O types by allele-specific polymerase chain reaction: application to the O types involved in human septicemia","volume":"57","author":"Clermont","year":"2007","journal-title":"Diagn. Microbiol. Infect. Dis."},{"key":"B16","doi-asserted-by":"publisher","first-page":"639","DOI":"10.1016\/S0923-2508(00)00134-0","article-title":"Identification of Escherichia coli O-serogroups by restriction of the amplified O-antigen gene cluster (rfb-RFLP)","volume":"151","author":"Coimbra","year":"2000","journal-title":"Res. Microbiol."},{"key":"B17","doi-asserted-by":"publisher","first-page":"1457","DOI":"10.1017\/S095026880900226X","article-title":"Escherichia coli shedding patterns in humans and dogs: insights into within-household transmission of phylotypes associated with urinary tract infections","volume":"137","author":"Damborg","year":"2009","journal-title":"Epidemiol. Infect."},{"key":"B18","doi-asserted-by":"publisher","first-page":"e0147434","DOI":"10.1371\/journal.pone.0147434","article-title":"Comparison of O-Antigen gene clusters of all O-Serogroups of Escherichia coli and proposal for adopting a new nomenclature for O-Typing","volume":"11","author":"DebRoy","year":"2016","journal-title":"PLoS ONE"},{"key":"B19","doi-asserted-by":"publisher","first-page":"28","DOI":"10.4315\/0362-028X-72.1.28","article-title":"Genotype, serotype, and antibiotic resistance of sorbitol-negative Escherichia coli isolates from feedlot cattle","volume":"72","author":"Diarra","year":"2009","journal-title":"J. Food Prot."},{"key":"B20","doi-asserted-by":"publisher","first-page":"1552","DOI":"10.1111\/j.1365-2672.2009.04575.x","article-title":"Pathogenic potential and horizontal gene transfer in ovine gastrointestinal Escherichia coli","volume":"108","author":"D\u00f6pfer","year":"2010","journal-title":"J. Appl. Microbiol."},{"key":"B21","doi-asserted-by":"publisher","first-page":"355","DOI":"10.1080\/03079450802216652","article-title":"Colibacillosis in poultry: unravelling the molecular basis of virulence of avian pathogenic Escherichia coli in their natural hosts","volume":"37","author":"Dziva","year":"2008","journal-title":"Avian Pathol."},{"key":"B22","volume-title":"Edwards and Ewing's Identification of Enterobacteriaceae","author":"Edwards","year":"1986"},{"key":"B23","doi-asserted-by":"publisher","first-page":"1224","DOI":"10.1093\/jac\/dkt516","article-title":"CTX-M-15-D-ST648 Escherichia coli from companion animals and horses: another pandemic clone combining multiresistance and extraintestinal virulence?","volume":"69","author":"Ewers","year":"2014","journal-title":"J. Antimicrob. Chemother."},{"key":"B24","doi-asserted-by":"publisher","first-page":"644","DOI":"10.3389\/fmicb.2016.00644","article-title":"Advances in molecular serotyping and subtyping of Escherichia coli","volume":"7","author":"Fratamico","year":"2016","journal-title":"Front. Microbiol."},{"key":"B25","doi-asserted-by":"publisher","first-page":"144","DOI":"10.1186\/1471-2180-8-144","article-title":"Characterization of attaching and effacing Escherichia coli (AEEC) isolated from pigs and sheep","volume":"8","author":"Fr\u00f6hlicher","year":"2008","journal-title":"BMC Microbiol."},{"key":"B26","doi-asserted-by":"publisher","first-page":"1609","DOI":"10.1128\/AAC.05539-11","article-title":"Molecular identification of extended-spectrum-\u03b2-lactamase genes from Enterobacteriaceae isolated from healthy human carriers in Switzerland","volume":"56","author":"Geser","year":"2012","journal-title":"Antimicrob. Agents Chemother."},{"key":"B27","doi-asserted-by":"crossref","first-page":"548","DOI":"10.1128\/jcm.6.6.548-550.1977","article-title":"Isolation of bacteriophages specific for the K1 polysaccharide antigen of Escherichia coli","volume":"6","author":"Gross","year":"1977","journal-title":"J. Clin. Microbiol."},{"key":"B28","doi-asserted-by":"publisher","first-page":"181","DOI":"10.1111\/j.1365-2672.2004.02305.x","article-title":"Identification of Escherichia coli O172 O-antigen gene cluster and development of a serogroup-specific PCR assay","volume":"97","author":"Guo","year":"2004","journal-title":"J. Appl. Microbiol."},{"key":"B29","doi-asserted-by":"publisher","first-page":"266","DOI":"10.1016\/j.micinf.2014.12.016","article-title":"Human-associated fluoroquinolone-resistant Escherichia coli clonal lineages, including ST354, isolated from canine feces and extraintestinal infections in Australia","volume":"17","author":"Guo","year":"2015","journal-title":"Microbes Infect."},{"key":"B30","doi-asserted-by":"publisher","first-page":"7963","DOI":"10.1128\/jb.174.24.7963-7970.1992","article-title":"Structures of the O1B and O1C lipopolysaccharide antigens of Escherichia coli","volume":"174","author":"Gupta","year":"1992","journal-title":"J. Bacteriol."},{"key":"B31","doi-asserted-by":"publisher","first-page":"685","DOI":"10.1111\/j.1469-0691.2008.02019.x","article-title":"Association between mortality of Escherichia coli meningitis in young infants and non-virulent clonal groups of strains","volume":"14","author":"Houdouin","year":"2008","journal-title":"Clin. Microbiol. Infect."},{"key":"B32","doi-asserted-by":"publisher","first-page":"2224","DOI":"10.4315\/0362-028X-68.10.2224","article-title":"Prevalence of Shiga toxin-producing Escherichia coli in beef cattle","volume":"68","author":"Hussein","year":"2005","journal-title":"J. Food Prot."},{"key":"B33","doi-asserted-by":"publisher","first-page":"536","DOI":"10.1136\/vr.d915","article-title":"Verocytotoxin-producing and attaching and effacing activity of Escherichia coli isolated from diseased farm livestock","volume":"168","author":"Hutchinson","year":"2011","journal-title":"Vet. Rec."},{"key":"B34","doi-asserted-by":"publisher","first-page":"101","DOI":"10.1093\/dnares\/dsu043","article-title":"A complete view of the genetic diversity of the Escherichia coli O-antigen biosynthesis gene cluster","volume":"22","author":"Iguchi","year":"2015a","journal-title":"DNA Res."},{"key":"B35","doi-asserted-by":"publisher","first-page":"2427","DOI":"10.1128\/JCM.00321-15","article-title":"Escherichia coli O-Genotyping PCR: a comprehensive and practical platform for molecular O Serogrouping","volume":"53","author":"Iguchi","year":"2015b","journal-title":"J. Clin. Microbiol."},{"key":"B36","doi-asserted-by":"publisher","first-page":"264","DOI":"10.1016\/j.ijfoodmicro.2010.06.025","article-title":"Broiler chickens, broiler chicken meat, pigs and pork as sources of ExPEC related virulence genes and resistance in Escherichia coli isolates from community-dwelling humans and UTI patients","volume":"142","author":"Jakobsen","year":"2010","journal-title":"Int. J. Food Microbiol."},{"key":"B37","doi-asserted-by":"publisher","first-page":"273","DOI":"10.1016\/S0008-6215(00)90084-3","article-title":"Structural studies of the O-specific side-chains of the Escherichia coli O2 lipopolysaccharide","volume":"161","author":"Jansson","year":"1987","journal-title":"Carbohydr. Res."},{"key":"B38","doi-asserted-by":"publisher","first-page":"2410","DOI":"10.1128\/JCM.00008-15","article-title":"Rapid and easy in silico serotyping of Escherichia coli isolates by use of whole-genome sequencing data","volume":"53","author":"Joensen","year":"2015","journal-title":"J. Clin. Microbiol."},{"key":"B39","doi-asserted-by":"publisher","first-page":"1702","DOI":"10.1016\/j.micinf.2006.02.007","article-title":"Phylogenetic relationships among clonal groups of extraintestinal pathogenic Escherichia coli as assessed by multi-locus sequence analysis","volume":"8","author":"Johnson","year":"2006","journal-title":"Microbes Infect."},{"key":"B40","doi-asserted-by":"publisher","first-page":"3228","DOI":"10.1128\/JB.01726-06","article-title":"The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes","volume":"189","author":"Johnson","year":"2007","journal-title":"J. Bacteriol."},{"key":"B41","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1089\/fpd.2011.0961","article-title":"Associations between multidrug resistance, plasmid content, and virulence potential among extraintestinal pathogenic and commensal Escherichia coli from humans and poultry","volume":"9","author":"Johnson","year":"2012a","journal-title":"Foodborne Pathog. Dis."},{"key":"B42","doi-asserted-by":"publisher","first-page":"2846","DOI":"10.1128\/JB.06375-11","article-title":"Prevalence of avian-pathogenic Escherichia coli strain O1 genomic islands among extraintestinal and commensal E. coli isolates","volume":"194","author":"Johnson","year":"2012b","journal-title":"J. Bacteriol."},{"key":"B43","doi-asserted-by":"publisher","first-page":"116","DOI":"10.11150\/kansenshogakuzasshi1970.67.116","article-title":"[Sporadic case of hemolytic uremic syndrome associated with verotoxin producing Escherichia coli O2:K1:H7]","volume":"67","author":"Kobayashi","year":"1993","journal-title":"Kansenshogaku Zasshi"},{"key":"B44","doi-asserted-by":"publisher","first-page":"87","DOI":"10.1016\/j.vetmic.2004.11.012","article-title":"Investigation of domestic animals and pets as a reservoir for intimin- (eae) gene positive Escherichia coli types","volume":"106","author":"Krause","year":"2005","journal-title":"Vet. Microbiol."},{"key":"B45","doi-asserted-by":"publisher","first-page":"71","DOI":"10.1016\/j.mimet.2010.04.008","article-title":"A multiplex PCR method to detect 14 Escherichia coli serogroups associated with urinary tract infections","volume":"82","author":"Li","year":"2010","journal-title":"J. Microbiol. Methods"},{"key":"B46","doi-asserted-by":"publisher","first-page":"7005","DOI":"10.1128\/jb.06284-11","article-title":"Complete genome sequence of the neonatal-meningitis-associated Escherichia coli strain CE10","volume":"193","author":"Lu","year":"2011","journal-title":"J. Bacteriol."},{"key":"B47","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1128\/microbiolspec.UTI-0006-2012","article-title":"Reservoirs of extraintestinal pathogenic Escherichia coli","author":"Manges","year":"2015","journal-title":"Microbiol. Spectr."},{"key":"B48","doi-asserted-by":"publisher","first-page":"99","DOI":"10.1016\/j.ijfoodmicro.2011.01.041","article-title":"Characteristics of Shiga toxin-producing Escherichia coli from meat and milk products of different origins and association with food producing animals as main contamination sources","volume":"146","author":"Martin","year":"2011","journal-title":"Int. J. Food Microbiol."},{"key":"B49","doi-asserted-by":"publisher","first-page":"1269","DOI":"10.4315\/0362-028X.JFP-13-506","article-title":"Identification of O serotypes, genotypes, and virulotypes of Shiga toxin-producing Escherichia coli isolates, including non-O157 from beef cattle in Japan","volume":"77","author":"Mekata","year":"2014","journal-title":"J. Food Prot."},{"key":"B50","doi-asserted-by":"publisher","first-page":"D213","DOI":"10.1093\/nar\/gku1243","article-title":"The InterPro protein families database: the classification resource after 15 years","volume":"43","author":"Mitchell","year":"2015","journal-title":"Nucleic Acids Res."},{"key":"B51","doi-asserted-by":"crossref","first-page":"257","DOI":"10.1128\/IAI.53.2.257-263.1986","article-title":"A reexamination of the O1 lipopolysaccharide antigen group of Escherichia coli","volume":"53","author":"Moll","year":"1986","journal-title":"Infect. Immun."},{"key":"B52","doi-asserted-by":"publisher","first-page":"132","DOI":"10.1186\/1471-2180-9-132","article-title":"Extraintestinal pathogenic Escherichia coli O1:K1:H7\/NM from human and avian origin: detection of clonal groups B2 ST95 and D ST59 with different host distribution","volume":"9","author":"Mora","year":"2009","journal-title":"BMC Microbiol."},{"key":"B53","doi-asserted-by":"publisher","first-page":"229","DOI":"10.1111\/j.1863-2378.2008.01190.x","article-title":"Domestic cats constitute a natural reservoir of human enteropathogenic Escherichia coli types","volume":"56","author":"Morato","year":"2009","journal-title":"Zoonoses Public Health"},{"key":"B54","doi-asserted-by":"publisher","first-page":"274","DOI":"10.1016\/j.micinf.2008.12.002","article-title":"Structure and urovirulence characteristics of the fecal Escherichia coli population among healthy women","volume":"11","author":"Moreno","year":"2009","journal-title":"Microbes Infect."},{"key":"B55","doi-asserted-by":"publisher","first-page":"3366","DOI":"10.1128\/JCM.00037-07","article-title":"Extraintestinal pathogenic Escherichia coli strains of avian and human origin: link between phylogenetic relationships and common virulence patterns","volume":"45","author":"Moulin-Schouleur","year":"2007","journal-title":"J. Clin. Microbiol."},{"key":"B56","doi-asserted-by":"publisher","first-page":"835","DOI":"10.1016\/j.ijmm.2014.06.009","article-title":"Extraintestinal pathogenic Escherichia coli (ExPEC) of human and avian origin belonging to sequence type complex 95 (STC95) portray indistinguishable virulence features","volume":"304","author":"Nandanwar","year":"2014","journal-title":"Int. J. Med. Microbiol."},{"key":"B57","doi-asserted-by":"publisher","first-page":"295","DOI":"10.1016\/0195-6701(95)90208-2","article-title":"A comparative study of nosocomial and community-acquired strains of Escherichia coli causing bacteraemia in a Danish University Hospital","volume":"31","author":"Olesen","year":"1995","journal-title":"J. Hosp. Infect."},{"key":"B58","doi-asserted-by":"publisher","first-page":"630","DOI":"10.1093\/infdis\/137.5.630","article-title":"Virulence factors of the bacterial cell surface","volume":"137","author":"Orskov","year":"1978","journal-title":"J. Infect. Dis."},{"key":"B59","first-page":"43","article-title":"Serotyping of Escherichia coli","volume-title":"Methods in Microbiology","author":"Orskov","year":"1984"},{"key":"B60","doi-asserted-by":"publisher","first-page":"699","DOI":"10.1139\/m92-115","article-title":"Escherichia coli serotyping and disease in man and animals","volume":"38","author":"Orskov","year":"1992","journal-title":"Can. J. Microbiol."},{"key":"B61","doi-asserted-by":"crossref","first-page":"667","DOI":"10.1128\/MMBR.41.3.667-710.1977","article-title":"Serology, chemistry, and genetics of O and K antigens of Escherichia coli","volume":"41","author":"Orskov","year":"1977","journal-title":"Bacteriol. Rev."},{"key":"B62","first-page":"189","article-title":"Six new E. coli O groups: O165, O166, O167, O168, O169 and O170","volume":"92","author":"Orskov","year":"1984","journal-title":"Acta Pathol. Microbiol. Immunol. Scand. B"},{"key":"B63","doi-asserted-by":"publisher","first-page":"2272","DOI":"10.1128\/IAI.01333-08","article-title":"The plasmid of Escherichia coli strain S88 (O45:K1:H7) that causes neonatal meningitis is closely related to avian pathogenic E. coli plasmids and is associated with high-level bacteremia in a neonatal rat meningitis model","volume":"77","author":"Peigne","year":"2009","journal-title":"Infect. Immun."},{"key":"B64","doi-asserted-by":"publisher","first-page":"1162","DOI":"10.1111\/j.1365-2672.2005.02545.x","article-title":"Detection of Escherichia coli serogroup O103 by real-time polymerase chain reaction","volume":"98","author":"Perelle","year":"2005","journal-title":"J. Appl. Microbiol."},{"key":"B65","doi-asserted-by":"publisher","first-page":"182","DOI":"10.1111\/j.1574-6968.2009.01511.x","article-title":"Sequence analysis of Escherichia coli O157:H7 bacteriophage PhiV10 and identification of a phage-encoded immunity protein that modifies the O157 antigen","volume":"292","author":"Perry","year":"2009","journal-title":"FEMS Microbiol. Lett."},{"key":"B66","doi-asserted-by":"publisher","first-page":"495","DOI":"10.1016\/S0966-842X(97)82912-5","article-title":"Bacterial polysaccharide synthesis and gene nomenclature","volume":"4","author":"Reeves","year":"1996","journal-title":"Trends Microbiol."},{"key":"B67","doi-asserted-by":"publisher","first-page":"380","DOI":"10.1111\/1469-0691.12646","article-title":"Pandemic lineages of extraintestinal pathogenic Escherichia coli","volume":"20","author":"Riley","year":"2014","journal-title":"Clin. Microbiol. Infect."},{"key":"B68","doi-asserted-by":"publisher","first-page":"384","DOI":"10.1016\/j.tvjl.2008.01.011","article-title":"Detection and characterisation of Shiga toxin-producing Escherichia coli other than Escherichia coli O157:H7 in wild ruminants","volume":"180","author":"S\u00e1nchez","year":"2009","journal-title":"Vet. J."},{"key":"B69","doi-asserted-by":"publisher","first-page":"569","DOI":"10.1111\/j.1600-0463.2004.apm1120903.x","article-title":"Designation of O174 and O175 to temporary O groups OX3 and OX7, and six new E. coli O groups that include Verocytotoxin-producing E. coli (VTEC): O176, O177, O178, O179, O180 and O181","volume":"112","author":"Scheutz","year":"2004","journal-title":"APMIS"},{"key":"B70","doi-asserted-by":"publisher","first-page":"2951","DOI":"10.1128\/JCM.00860-12","article-title":"Multicenter evaluation of a sequence-based protocol for subtyping Shiga toxins and standardizing Stx nomenclature","volume":"50","author":"Scheutz","year":"2012","journal-title":"J. Clin. Microbiol."},{"key":"B71","doi-asserted-by":"publisher","first-page":"288","DOI":"10.1016\/j.vetmic.2008.08.008","article-title":"Detection of numerous verotoxigenic E. coli serotypes, with multiple antibiotic resistance from cattle faeces and soil","volume":"134","author":"Scott","year":"2009","journal-title":"Vet. Microbiol."},{"key":"B72","doi-asserted-by":"publisher","first-page":"2068","DOI":"10.1093\/bioinformatics\/btu153","article-title":"Prokka: rapid prokaryotic genome annotation","volume":"30","author":"Seemann","year":"2014","journal-title":"Bioinformatics"},{"key":"B73","doi-asserted-by":"publisher","first-page":"28","DOI":"10.3389\/fmicb.2015.00028","article-title":"Urinary tract infections attributed to diverse ExPEC strains in food animals: evidence and data gaps","volume":"6","author":"Singer","year":"2015","journal-title":"Front. Microbiol."},{"key":"B74","doi-asserted-by":"publisher","first-page":"382","DOI":"10.1111\/j.1574-6976.2006.00016.x","article-title":"The structures of Escherichia coli O-polysaccharide antigens","volume":"30","author":"Stenutz","year":"2006","journal-title":"FEMS Microbiol. Rev."},{"key":"B75","doi-asserted-by":"crossref","first-page":"2775","DOI":"10.1128\/JB.180.10.2775-2778.1998","article-title":"Generation of Escherichia coli O9a serotype, a subtype of E. coli O9, by transfer of the wb* gene cluster of Klebsiella O3 into E. coli via recombination","volume":"180","author":"Sugiyama","year":"1998","journal-title":"J. Bacteriol."},{"key":"B76","doi-asserted-by":"publisher","first-page":"88","DOI":"10.3201\/eid1601.091118","article-title":"Food reservoir for Escherichia coli causing urinary tract infections","volume":"16","author":"Vincent","year":"2010","journal-title":"Emerg. Infect. Dis."},{"key":"B77","doi-asserted-by":"publisher","first-page":"2620","DOI":"10.1128\/JB.184.10.2620-2625.2002","article-title":"The O-antigen gene cluster of Escherichia coli O55:H7 and identification of a new UDP-GlcNAc C4 epimerase gene","volume":"184","author":"Wang","year":"2002","journal-title":"J. Bacteriol."},{"key":"B78","doi-asserted-by":"crossref","first-page":"2138","DOI":"10.1128\/IAI.61.5.2138-2144.1993","article-title":"Influence of some bacterial and host factors on colonization and invasiveness of Escherichia coli K1 in neonatal rats","volume":"61","author":"Wullenweber","year":"1993","journal-title":"Infect. Immun."}],"container-title":["Frontiers in Cellular and Infection Microbiology"],"original-title":[],"link":[{"URL":"http:\/\/journal.frontiersin.org\/article\/10.3389\/fcimb.2017.00030\/full","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,7,23]],"date-time":"2022-07-23T17:10:55Z","timestamp":1658596255000},"score":1,"resource":{"primary":{"URL":"http:\/\/journal.frontiersin.org\/article\/10.3389\/fcimb.2017.00030\/full"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,2,7]]},"references-count":78,"URL":"https:\/\/doi.org\/10.3389\/fcimb.2017.00030","relation":{},"ISSN":["2235-2988"],"issn-type":[{"value":"2235-2988","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,2,7]]}}}