{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,9,30]],"date-time":"2025-09-30T10:52:24Z","timestamp":1759229544048,"version":"3.41.2"},"reference-count":72,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2021,3,2]],"date-time":"2021-03-02T00:00:00Z","timestamp":1614643200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100004440","name":"Wellcome Trust","doi-asserted-by":"publisher","award":["Wellcome Trust ISSF award 204821\/Z\/16\/Z:"],"award-info":[{"award-number":["Wellcome Trust ISSF award 204821\/Z\/16\/Z:"]}],"id":[{"id":"10.13039\/100004440","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100000265","name":"Medical Research Council","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100000265","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Cell. Infect. Microbiol."],"abstract":"<jats:p>Malaria is responsible for unacceptably high morbidity and mortality, especially in Sub-Saharan African Nations. Malaria is caused by member species\u2019 of the genus<jats:italic>Plasmodium<\/jats:italic>and despite concerted and at times valiant efforts, the underlying pathophysiological processes leading to severe disease are poorly understood. Here we describe zoonotic malaria caused by<jats:italic>Plasmodium knowlesi<\/jats:italic>and the utility of this parasite as a model system for severe malaria. We present a method to generate long-read third-generation<jats:italic>Plasmodium<\/jats:italic>genome sequence data from archived clinical samples using the MinION platform. The method and technology are accessible, affordable and data is generated in real-time. We propose that by widely adopting this methodology important information on clinically relevant parasite diversity, including multiple gene family members, from geographically distinct study sites will emerge. Our goal, over time, is to exploit the duality of<jats:italic>P. knowlesi<\/jats:italic>as a well-used laboratory model and human pathogen to develop a representative translational model system for severe malaria that is informed by clinically relevant parasite diversity.<\/jats:p>","DOI":"10.3389\/fcimb.2021.607686","type":"journal-article","created":{"date-parts":[[2021,3,2]],"date-time":"2021-03-02T04:55:42Z","timestamp":1614660942000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":5,"title":["Plasmodium knowlesi \u2013 Clinical Isolate Genome Sequencing to Inform Translational Same-Species Model System for Severe Malaria"],"prefix":"10.3389","volume":"11","author":[{"given":"Damilola R.","family":"Oresegun","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Cyrus","family":"Daneshvar","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Janet","family":"Cox-Singh","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"1965","published-online":{"date-parts":[[2021,3,2]]},"reference":[{"key":"B1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0003086","article-title":"Disease progression in Plasmodium knowlesi malaria is linked to variation in invasion gene family members","volume":"8","author":"Ahmed","year":"2014","journal-title":"PloS Negl. 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