{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,20]],"date-time":"2026-08-20T15:04:15Z","timestamp":1787238255714,"version":"build-2736575974"},"reference-count":40,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2024,5,17]],"date-time":"2024-05-17T00:00:00Z","timestamp":1715904000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100004586","name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro","doi-asserted-by":"publisher","award":["JCNE E-26\/203.301\/2017, JCNE E-26\/201.433\/2021, E-26\/203.515\/2023"],"award-info":[{"award-number":["JCNE E-26\/203.301\/2017, JCNE E-26\/201.433\/2021, E-26\/203.515\/2023"]}],"id":[{"id":"10.13039\/501100004586","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003593","name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100003593","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100002322","name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100002322","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Cell. Infect. Microbiol."],"abstract":"<jats:sec>\n                    <jats:title>Introduction<\/jats:title>\n                    <jats:p>\n                      Sporotrichosis is a subcutaneous mycosis caused by fungi of the genus\n                      <jats:italic>Sporothrix<\/jats:italic>\n                      sp. Phenotypic and genotypic differences have been associated with their geographic distribution, virulence, or clinical manifestation of sporotrichosis. In the past decade, the interest in identifying species of the\n                      <jats:italic>Sporothrix<\/jats:italic>\n                      sp. has been increasing, due to its epidemiological importance and, in consequence, is important to know how to preserve them for future studies, in culture collection.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Aims<\/jats:title>\n                    <jats:p>The purposes of this study were to analyze the global distribution of environmental isolates and\/or causal agents of sporotrichosis identified by polyphasic taxonomy, with mandatory use of molecular identification, and to evaluate the percentages and distribution of isolates stored in culture collections.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>\n                      A systematic review of articles on animal and human sporotrichosis and\/or environmental isolation of the fungus, from 2007 to 2023, was done. Results: Our results demonstrated that,\n                      <jats:italic>S. globosa<\/jats:italic>\n                      ,\n                      <jats:italic>S. schenckii<\/jats:italic>\n                      , and\n                      <jats:italic>S. brasiliensis<\/jats:italic>\n                      were the most identified species. With respect to the deposit and maintenance of species, we observed that only 17% of the strains of\n                      <jats:italic>Sporothrix<\/jats:italic>\n                      sp. isolated in the world are preserved in a culture collection.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusions<\/jats:title>\n                    <jats:p>\n                      This systematic review confirmed a difficulty in obtaining the frequency of\n                      <jats:italic>Sporothrix<\/jats:italic>\n                      species stored in culture collection and insufficient data on the molecular identification mainly of animal sporotrichosis and isolation of\n                      <jats:italic>Sporothrix<\/jats:italic>\n                      sp. in environmental samples.\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.3389\/fcimb.2024.1382508","type":"journal-article","created":{"date-parts":[[2024,5,17]],"date-time":"2024-05-17T00:27:16Z","timestamp":1715905636000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":8,"title":["Systematic review of literature to evaluate global distribution of species of the Sporothrix genus stored in culture collections"],"prefix":"10.3389","volume":"14","author":[{"given":"Debora Salgado","family":"Morgado","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rodolfo","family":"Castro","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marcelo","family":"Ribeiro-Alves","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Danielly","family":"Corr\u00eaa-Moreira","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"J\u00falio Castro Alves de Lima e","family":"Silva","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rodrigo Caldas","family":"Menezes","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Manoel Marques Evangelista","family":"Oliveira","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2024,5,17]]},"reference":[{"key":"B1","doi-asserted-by":"publisher","first-page":"654","DOI":"10.12688\/f1000research.24250.2","article-title":"Bibliometric assessment and key messages of sporotrichosis research, (1945-2018)","volume":"29","author":"Albuquerque","year":"2020","journal-title":"F1000Research"},{"key":"B2","doi-asserted-by":"publisher","DOI":"10.1093\/trstmh\/trz081","article-title":"Geo-epidemiology and socioeconomic aspects of human sporotrichosis in the municipality of Duque de Caxias, Rio de Janeiro, Brazil, between 2007 and 2016","volume":"114","author":"Alzuguir","year":"2019","journal-title":"Trans. R. Soc. Trop. Med. Hygiene."},{"key":"B3","doi-asserted-by":"publisher","first-page":"633","DOI":"10.1128\/CMR.00007-11","article-title":"Sporothrix schenckii and sporotrichosis","volume":"24","author":"Barros","year":"2011","journal-title":"Clin. Microbiol. Rev."},{"key":"B4","doi-asserted-by":"publisher","DOI":"10.3390\/jof8070749","article-title":"Sporothrix brasiliensis and Feline Sporotrichosis in the Metropolitan Region of Rio de Janeiro, Brazil, (1998-2018)","volume":"8","author":"Boechat","year":"2022","journal-title":"J. Fungi (Basel)."},{"key":"B5","doi-asserted-by":"publisher","first-page":"98","DOI":"10.1016\/j.fgb.2004.11.008","article-title":"Fungal virulence, vertebrate endothermy, and dinosaur extinction: is there a connection","volume":"42","author":"Casadevall","year":"2005","journal-title":"Fungal Genet. Biol."},{"key":"B6","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1093\/mmy\/myu062","article-title":"Global epidemiology of sporotrichosis","volume":"53","author":"Chakrabarti","year":"2015","journal-title":"Med. Mycol."},{"key":"B7","doi-asserted-by":"publisher","first-page":"165","DOI":"10.1016\/j.simyco.2016.07.001","article-title":"The divorce of Sporothrix and Ophiostoma: solution to a problematic relationship","volume":"83","author":"De Beer","year":"2016","journal-title":"Stud. Mycol."},{"key":"B8","doi-asserted-by":"publisher","first-page":"907","DOI":"10.1590\/abd1806-4841.20187726","article-title":"Report of 73 cases of cutaneous sporotrichosis in Mexico","volume":"93","author":"Estrada-Casta\u00f1\u00f3n","year":"2018","journal-title":"Anais Brasilierios Dermatol."},{"key":"B9","doi-asserted-by":"publisher","first-page":"1228","DOI":"10.3201\/eid1308.061462","article-title":"Outbreak of sporotrichosis, Western Australia","volume":"13","author":"Feeney","year":"2007","journal-title":"Emerg. Infect. Dis."},{"key":"B10","doi-asserted-by":"publisher","first-page":"40","DOI":"10.1371\/journal.pntd.0004096","article-title":"An outbreak of lymphocutaneous sporotrichosis among mine-workers in South Africa","volume":"9","author":"Govender","year":"2015","journal-title":"PloS Negl. Trop. Dis."},{"key":"B11","doi-asserted-by":"publisher","DOI":"10.1093\/mmy\/myu061","article-title":"Feline sporotrichosis: epidemiological and clinical aspects","volume":"53","author":"Gremi\u00e3o","year":"2015","journal-title":"Med. Mycol"},{"key":"B12","doi-asserted-by":"publisher","first-page":"100","DOI":"10.1371\/journal.ppat.1006077","article-title":"Zoonotic epidemic of sporotrichosis: cat to human transmission","volume":"13","author":"Gremi\u00e3o","year":"2017","journal-title":"PloS Pathog."},{"key":"B13","doi-asserted-by":"publisher","first-page":"621","DOI":"10.3201\/eid2603.190803","article-title":"Geographic expansion of sporotrichosis, Brazil","volume":"26","author":"Gremi\u00e3o","year":"2020","journal-title":"Emerg. Infect. Dis."},{"key":"B14","doi-asserted-by":"publisher","first-page":"107","DOI":"10.1007\/s42770-020-00365-3","article-title":"Guideline for the management of feline sporotrichosis caused by Sporothrix brasiliensis and literature revision","volume":"52","author":"Gremi\u00e3o","year":"2021","journal-title":"Braz. J. Microbiol."},{"key":"B15","doi-asserted-by":"publisher","first-page":"1422","DOI":"10.1017\/S0953756201004725","article-title":"The magnitude of fungal diversity: the 1.5 million species estimate revisited","volume":"105","author":"Hawksworth","year":"2001","journal-title":"Mycology"},{"key":"B16","doi-asserted-by":"publisher","first-page":"218","DOI":"10.1016\/j.riam.2009.02.005","article-title":"Sporothrix globosa, a pathogenic fungus with widespread geographical distribution","volume":"26","author":"Madrid","year":"2009","journal-title":"Rev. Iberoamericana Micolog\u00eda."},{"key":"B17","doi-asserted-by":"publisher","first-page":"20551169","DOI":"10.1177\/2055116920906001","article-title":"First case report of cutaneous sporotrichosis (Sporothrix species) in a cat in the UK","volume":"6","author":"Makri","year":"2020","journal-title":"JFMS Open Rep."},{"key":"B18","doi-asserted-by":"publisher","first-page":"3198","DOI":"10.1128\/JCM.00808-07","article-title":"Sporothrix brasiliensis, S. globosa, and S. mexicana, three new Sporothrix species of clinical interest","volume":"45","author":"Marimon","year":"2007","journal-title":"J. Clin. Microbiol."},{"key":"B19","doi-asserted-by":"publisher","first-page":"621","DOI":"10.1080\/13693780801992837","article-title":"Sporothrix luriei: a rare fungus from clinical origin","volume":"46","author":"Marimon","year":"2008","journal-title":"Med. Mycol."},{"key":"B20","doi-asserted-by":"publisher","first-page":"3251","DOI":"10.1128\/JCM.00081-06","article-title":"Molecular phylogeny of Sporothrix schenckii","volume":"44","author":"Marimon","year":"2006","journal-title":"J. Clin. Microbiol."},{"key":"B21","doi-asserted-by":"publisher","DOI":"10.1186\/s12879-016-1338-0","article-title":"Epidemiological investigation of an outbreak of cutaneous sporotrichosis, Northern Territory, Australia","volume":"16","author":"Mcguinness","year":"2016","journal-title":"BMC Infect. Dis."},{"key":"B22","first-page":"27","article-title":"Effect of global warming on soil microbial community","author":"Mendes","year":"2017","journal-title":"Embrapa Meio Ambiente"},{"key":"B23","doi-asserted-by":"crossref","first-page":"37","DOI":"10.1016\/B978-012509551-8\/50006-4","article-title":"Preservation and distribution of fungal cultures","volume-title":"Biodiversity of fungi, inventory and monitoring methods","author":"Nakasone","year":"2004"},{"key":"B24","doi-asserted-by":"publisher","first-page":"39","DOI":"10.1016\/j.mmcr.2019.07.008","article-title":"Sporothrix humicola (Ascomycota: Ophiostomatales) - A soil-borne fungus with pathogenic potential in the eastern quoll (Dasyurus viverrinus)","volume":"25","author":"Nesseler","year":"2019","journal-title":"Med. Mycol. Case Rep."},{"key":"B25","doi-asserted-by":"publisher","first-page":"905","DOI":"10.1093\/mmy\/myy126","article-title":"Identification of multiple species and subpopulations among Australian clinical Sporothrix isolates using whole genome sequencing","volume":"57","author":"New","year":"2019","journal-title":"Med. Mycol."},{"key":"B26","doi-asserted-by":"publisher","first-page":"257","DOI":"10.1007\/s11046-011-9437-3","article-title":"Phenotypic and molecular identification of sporothrix isolates from an epidemic area of Sporotrichosis in Brazil","volume":"172","author":"Oliveira","year":"2011","journal-title":"Mycopathologia"},{"key":"B27","doi-asserted-by":"publisher","first-page":"65","DOI":"10.1086\/313607","article-title":"Sporotrichosis in Peru: description of an area of hyperendemicity","volume":"30","author":"Pappas","year":"2000","journal-title":"Clin. Infect. Dis."},{"key":"B28","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1007\/978-3-319-11912-0_6","article-title":"Sporotrichosis in Animals: Zoonotic Transmission","volume-title":"Sporotrichosis","author":"Pereira","year":"2015"},{"key":"B29","doi-asserted-by":"publisher","first-page":"51","DOI":"10.1177\/120347540000400113","article-title":"Sporotrichosis infection on mines of the Witwatersrand","volume":"4","author":"Quintal","year":"2000","journal-title":"J. Cutaneous Med. Surg."},{"key":"B30","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0127924","article-title":"Sporotrichosis: the story of an endemic region in Peru over 28 years, (1985 to 2012)","volume":"10","author":"Ram\u00edrez Soto","year":"2015","journal-title":"PloS One"},{"key":"B31","doi-asserted-by":"publisher","first-page":"684","DOI":"10.1093\/mmy\/myw027","article-title":"Association of itraconazole and potassium iodide in the treatment of feline sporotrichosis: a prospective study","volume":"54","author":"Reis","year":"2016","journal-title":"Med. Mycol. Rio Janeiro"},{"key":"B32","doi-asserted-by":"publisher","first-page":"246","DOI":"10.1016\/j.funbio.2015.05.006","article-title":"Sporothrix Chilensis sp. nov. (Ascomycota: Ophiostomatales), a soil-borne agent of human sporotrichosis with mild-pathogenic potential to mammals","volume":"120","author":"Rodrigues","year":"2016","journal-title":"Fungal Biol."},{"key":"B33","doi-asserted-by":"publisher","first-page":"405","DOI":"10.3109\/13693786.2012.719648","article-title":"Emergence of pathogenicity in the Sporothrix schenckii complex","volume":"51","author":"Rodrigues","year":"2013","journal-title":"Med. Mycol."},{"key":"B34","doi-asserted-by":"publisher","DOI":"10.1038\/emi.2014.33","article-title":"Emerging sporotrichosis is driven by clonal and recombinant Sporothrix species","volume":"3","author":"Rodrigues","year":"2014","journal-title":"Emerg. Microbes Infect."},{"key":"B35","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0002281","article-title":"Phylogenetic analysis reveals a high prevalence of Sporothrix brasiliensis in feline sporotrichosis outbreaks","volume":"7","author":"Rodrigues","year":"2013","journal-title":"PloS Negl. Trop. Dis."},{"key":"B36","doi-asserted-by":"publisher","first-page":"813","DOI":"10.1007\/s11046-020-00425-0","article-title":"The threat of emerging and re-emerging pathogenic Sporothrix species","volume":"185","author":"Rodrigues","year":"2020","journal-title":"Mycopathologia"},{"key":"B37","first-page":"608","article-title":"Sporotrichosis","volume-title":"Infectious diseases of the dog and cat","author":"Rosser","year":"2006"},{"key":"B38","doi-asserted-by":"publisher","first-page":"1623","DOI":"10.2460\/javma.2004.224.1623","article-title":"Evaluation of an epidemic of sporotrichosis in cats: 347 cases, (1998\u20132001)","volume":"224","author":"Schubach","year":"2004","journal-title":"J. Am. Vet. Med. Assoc."},{"key":"B39","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0008151","article-title":"Is Sporothrix Chilensis circulating outside Chile","volume":"14","author":"Valeriano","year":"2020","journal-title":"PloS Negl. Trop. Dis."},{"key":"B40","doi-asserted-by":"publisher","first-page":"1","DOI":"10.3767\/003158515X687416","article-title":"Phylogeography and evolutionary patterns in Sporothrix spanning more than 14 000 human and animal case reports","volume":"35","author":"Zhang","year":"2015","journal-title":"Persoonia"}],"container-title":["Frontiers in Cellular and Infection Microbiology"],"original-title":[],"link":[{"URL":"https:\/\/www.frontiersin.org\/articles\/10.3389\/fcimb.2024.1382508\/full","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,5,17]],"date-time":"2024-05-17T00:27:23Z","timestamp":1715905643000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.frontiersin.org\/articles\/10.3389\/fcimb.2024.1382508\/full"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,5,17]]},"references-count":40,"alternative-id":["10.3389\/fcimb.2024.1382508"],"URL":"https:\/\/doi.org\/10.3389\/fcimb.2024.1382508","relation":{},"ISSN":["2235-2988"],"issn-type":[{"value":"2235-2988","type":"electronic"}],"subject":[],"published":{"date-parts":[[2024,5,17]]},"article-number":"1382508"}}