{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,16]],"date-time":"2026-04-16T06:54:34Z","timestamp":1776322474811,"version":"3.50.1"},"reference-count":38,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2025,10,24]],"date-time":"2025-10-24T00:00:00Z","timestamp":1761264000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Cell. Infect. Microbiol."],"abstract":"<jats:sec>\n                    <jats:title>Introduction<\/jats:title>\n                    <jats:p>\n                      <jats:italic>Plasmodium falciparum<\/jats:italic>\n                      , the causative agent of severe malaria, predominantly reproduces through asexual stages within human red blood cells, with a small subset differentiating into transmissible gametocytes. TCF25 is recognized in other eukaryotes as a protein with dual roles: a transcriptional regulator and a key component of the Ribosome-associated Quality Control (RQC) complex. Nevertheless, the precise biological function of TCF25 in\n                      <jats:italic>Plasmodium<\/jats:italic>\n                      spp. remains inadequately elucidated.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>\n                      To investigate the function of TCF25, we created a\n                      <jats:italic>tcf25<\/jats:italic>\n                      knockout (\n                      <jats:italic>tcf25_ko<\/jats:italic>\n                      ) parasite strain and conducted comparative transcriptomic analysis during the ring and schizont stages. Gametocyte induction experiments were performed to investigate the impact of\n                      <jats:italic>tcf25<\/jats:italic>\n                      deletion on gametocyte development. Chromatin immunoprecipitation sequencing (ChIP-seq) was utilized to delineate the genome-wide binding profiles in schizont-stage parasites. Additionally, RT\u2013qPCR was used to quantify changes in rRNA expression levels after\n                      <jats:italic>tcf25<\/jats:italic>\n                      knockout.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>\n                      Transcriptomic analysis of\n                      <jats:italic>tcf25_ko<\/jats:italic>\n                      parasites indicated substantial dysregulation, with 168 genes downregulated and 24 genes upregulated during the ring stage, and 53 genes downregulated and 4 genes upregulated during the schizont stage. ChIP-seq analysis identified 44 high-confidence TCF25-binding target genes, which notably included the rDNA. Furthermore, TCF25 deficiency resulted in upregulated rRNA expression, particularly affecting 28S rRNA, a core component of the 60S ribosomal subunit.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Discussion<\/jats:title>\n                    <jats:p>\n                      This study identifies TCF25 as a key regulator of various biological processes in\n                      <jats:italic>P. falciparum<\/jats:italic>\n                      . It is shown that TCF25 plays a crucial role in gametocytogenesis by influencing the\n                      <jats:italic>ap2-g<\/jats:italic>\n                      pathway. Additionally, a novel function of TCF25 in ribosomal biogenesis is uncovered, wherein it directly controls A-type rRNAs expression and ribosomal subunit homeostasis. These discoveries offer fresh perspectives on the molecular mechanisms that oversee transmission and ribosome biogenesis in malaria parasites.\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.3389\/fcimb.2025.1652542","type":"journal-article","created":{"date-parts":[[2025,10,24]],"date-time":"2025-10-24T05:26:50Z","timestamp":1761283610000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":3,"title":["Transcription factor 25 modulates gametocytogenesis and ribosome biogenesis in the malaria parasite Plasmodium falciparum"],"prefix":"10.3389","volume":"15","author":[{"given":"Jing","family":"Wu","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zuping","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Chandara","family":"Ngim","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wenyu","family":"Yang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Peiyi","family":"Li","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Fei","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jingru","family":"Ye","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bo","family":"Li","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bin","family":"Tian","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Qingfeng","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiaomin","family":"Shang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"1965","published-online":{"date-parts":[[2025,10,24]]},"reference":[{"key":"B1","doi-asserted-by":"publisher","first-page":"617","DOI":"10.1101\/gad.352389.124","article-title":"The ribosome-associated quality control factor TCF25 imposes K48 specificity on Listerin-mediated ubiquitination of nascent chains by binding and specifically orienting the acceptor ubiquitin","volume":"39","author":"Abaeva","year":"2025","journal-title":"Genes Dev."},{"key":"B2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbc.2021.100586","article-title":"Rqc1 and other yeast proteins containing highly positively charged sequences are not targets of the RQC complex","volume":"296","author":"Barros","year":"2021","journal-title":"J. Biol. Chem."},{"key":"B3","doi-asserted-by":"publisher","first-page":"2050","DOI":"10.1111\/nph.17013","article-title":"SUMOylation of PHYTOCHROME INTERACTING FACTOR 3 promotes photomorphogenesis in Arabidopsis thaliana","volume":"229","author":"Bernula","year":"2021","journal-title":"New Phytol."},{"key":"B4","doi-asserted-by":"publisher","first-page":"390","DOI":"10.1016\/j.pt.2022.01.011","article-title":"Transmission-blocking drugs for malaria elimination","volume":"38","author":"Birkholtz","year":"2022","journal-title":"Trends Parasitol."},{"key":"B5","doi-asserted-by":"publisher","first-page":"1042","DOI":"10.1016\/j.cell.2012.10.044","article-title":"A ribosome-bound quality control complex triggers degradation of nascent peptides and signals translation stress","volume":"151","author":"Brandman","year":"2012","journal-title":"Cell"},{"key":"B6","doi-asserted-by":"publisher","first-page":"973","DOI":"10.1016\/j.bbrc.2006.02.187","article-title":"hnulp1, a basic helix-loop-helix protein with a novel transcriptional repressive domain, inhibits transcriptional activity of serum response factor","volume":"343","author":"Cai","year":"2006","journal-title":"Biochem. Biophys. Res. Commun."},{"key":"B7","doi-asserted-by":"publisher","DOI":"10.1016\/j.dcit.2024.100018","article-title":"Recent malaria outbreak in the USA: Risk of and response to malaria reintroduction in non-endemic regions","volume":"2","author":"Cui","year":"2024","journal-title":"Decoding Infection Transm."},{"key":"B8","doi-asserted-by":"publisher","first-page":"12245","DOI":"10.1074\/jbc.M116.722264","article-title":"Rqc1 and ltn1 prevent C-terminal alanine-threonine tail (CAT-tail)-induced protein aggregation by efficient recruitment of cdc48 on stalled 60S subunits","volume":"291","author":"Defenouill\u00e8re","year":"2016","journal-title":"J. Biol. Chem."},{"key":"B9","doi-asserted-by":"publisher","first-page":"4553","DOI":"10.1093\/nar\/gkr070","article-title":"Using a structural and logics systems approach to infer bHLH-DNA binding specificity determinants","volume":"39","author":"De Masi","year":"2011","journal-title":"Nucleic Acids Res."},{"key":"B10","doi-asserted-by":"publisher","first-page":"90","DOI":"10.1016\/j.molbiopara.2005.05.010","article-title":"Identification of a subtelomeric gene family expressed during the asexual-sexual stage transition in Plasmodium falciparum","volume":"143","author":"Eksi","year":"2005","journal-title":"Mol. Biochem. Parasitol."},{"key":"B11","doi-asserted-by":"publisher","first-page":"720","DOI":"10.1074\/jbc.M308284200","article-title":"The effects of glucose concentration on the reciprocal regulation of rRNA promoters in Plasmodium falciparum","volume":"279","author":"Fang","year":"2004","journal-title":"J. Biol. Chem."},{"key":"B12","doi-asserted-by":"publisher","first-page":"1451","DOI":"10.1016\/j.molcel.2022.03.038","article-title":"Ribosome-associated quality-control mechanisms from bacteria to humans","volume":"82","author":"Filbeck","year":"2022","journal-title":"Mol. Cell"},{"key":"B13","doi-asserted-by":"publisher","first-page":"726","DOI":"10.1016\/j.devcel.2019.01.006","article-title":"CIPK11-dependent phosphorylation modulates FIT activity to promote arabidopsis iron acquisition in response to calcium signaling","volume":"48","author":"Gratz","year":"2019","journal-title":"Dev. Cell"},{"key":"B14","doi-asserted-by":"publisher","first-page":"3017","DOI":"10.1128\/iai.65.8.3017-3023.1997","article-title":"Complement-mediated lysis of Plasmodium falciparum gametes by malaria-immune human sera is associated with antibodies to the gamete surface antigen Pfs230","volume":"65","author":"Healer","year":"1997","journal-title":"Infection Immun."},{"key":"B15","doi-asserted-by":"publisher","first-page":"1503","DOI":"10.1038\/s41467-020-15026-0","article-title":"Dissecting the role of PfAP2-G in malaria gametocytogenesis","volume":"11","author":"Josling","year":"2020","journal-title":"Nat. Commun."},{"key":"B16","doi-asserted-by":"publisher","first-page":"501","DOI":"10.1146\/annurev-micro-090817-062712","article-title":"Regulation of sexual commitment and gametocytogenesis in malaria parasites","volume":"72","author":"Josling","year":"2018","journal-title":"Annu. Rev. Microbiol."},{"key":"B17","doi-asserted-by":"publisher","first-page":"248","DOI":"10.1038\/nature12920","article-title":"A transcriptional switch underlies commitment to sexual development in malaria parasites","volume":"507","author":"Kafsack","year":"2014","journal-title":"Nature"},{"key":"B18","doi-asserted-by":"publisher","first-page":"93","DOI":"10.1186\/s12916-016-0641-3","article-title":"How important is gametocyte clearance after malaria therapy","volume":"14","author":"Karunajeewa","year":"2016","journal-title":"BMC Med."},{"key":"B19","doi-asserted-by":"publisher","first-page":"115","DOI":"10.1186\/s12870-020-2315-8","article-title":"Genome-wide survey of the bHLH super gene family in Brassica napus","volume":"20","author":"Ke","year":"2020","journal-title":"BMC Plant Biol."},{"key":"B20","doi-asserted-by":"publisher","first-page":"eaaz5057","DOI":"10.1126\/sciadv.aaz5057","article-title":"Conditional expression of PfAP2-G for controlled massive sexual conversion in Plasmodium falciparum","volume":"6","author":"Llor\u00e0-Batlle","year":"2020","journal-title":"Sci. Adv."},{"key":"B21","doi-asserted-by":"publisher","first-page":"e00148","DOI":"10.1128\/mBio.00148-21","article-title":"The architectural factor HMGB1 is involved in genome organization in the human malaria parasite plasmodium falciparum","volume":"12","author":"Lu","year":"2021","journal-title":"mBio"},{"key":"B22","doi-asserted-by":"publisher","first-page":"14042","DOI":"10.1038\/s41598-017-12578-y","article-title":"An ApiAP2 member regulates expression of clonally variant genes of the human malaria parasite Plasmodium falciparum","volume":"7","author":"Martins","year":"2017","journal-title":"Sci. Rep."},{"key":"B23","doi-asserted-by":"publisher","DOI":"10.1101\/cshperspect.a025452","article-title":"Biology of malaria transmission","volume":"7","author":"Meibalan","year":"2017","journal-title":"Cold Spring Harb. Perspect. Med."},{"key":"B24","doi-asserted-by":"publisher","first-page":"401","DOI":"10.1093\/femsre\/fuz010","article-title":"Revisiting gametocyte biology in malaria parasites","volume":"43","author":"Ngotho","year":"2019","journal-title":"FEMS Microbiol. Rev."},{"key":"B25","doi-asserted-by":"publisher","first-page":"273","DOI":"10.1104\/pp.114.250837","article-title":"Iron-binding E3 ligase mediates iron response in plants by targeting basic helix-loop-helix transcription factors","volume":"167","author":"Selote","year":"2015","journal-title":"Plant Physiol."},{"key":"B26","doi-asserted-by":"publisher","first-page":"9264","DOI":"10.1093\/nar\/gkab683","article-title":"A cascade of transcriptional repression determines sexual commitment and development in Plasmodium falciparum","volume":"49","author":"Shang","year":"2021","journal-title":"Nucleic Acids Res."},{"key":"B27","doi-asserted-by":"publisher","first-page":"3413","DOI":"10.1093\/nar\/gkac176","article-title":"Genome-wide landscape of ApiAP2 transcription factors reveals a heterochromatin-associated regulatory network during Plasmodium falciparum blood-stage development","volume":"50","author":"Shang","year":"2022","journal-title":"Nucleic Acids Res."},{"key":"B28","doi-asserted-by":"publisher","first-page":"1437","DOI":"10.1074\/mcp.M900479-MCP200","article-title":"Protein export marks the early phase of gametocytogenesis of the human malaria parasite Plasmodium falciparum","volume":"9","author":"Silvestrini","year":"2010","journal-title":"Mol. Cell Proteomics"},{"key":"B29","doi-asserted-by":"publisher","first-page":"987","DOI":"10.1016\/j.pt.2024.09.007","article-title":"Unraveling the complexities of ApiAP2 regulation in Plasmodium falciparum","volume":"40","author":"Singhal","year":"2024","journal-title":"Trends Parasitol."},{"key":"B30","doi-asserted-by":"publisher","first-page":"253","DOI":"10.1038\/nature12970","article-title":"A cascade of DNA-binding proteins for sexual commitment and development in Plasmodium","volume":"507","author":"Sinha","year":"2014","journal-title":"Nature"},{"key":"B31","doi-asserted-by":"publisher","first-page":"2892","DOI":"10.1093\/plcell\/koac142","article-title":"The conjugation of SUMO to the transcription factor MYC2 functions in blue light-mediated seedling development in Arabidopsis","volume":"34","author":"Srivastava","year":"2022","journal-title":"Plant Cell"},{"key":"B32","doi-asserted-by":"publisher","first-page":"432","DOI":"10.1016\/j.bbrc.2007.11.146","article-title":"Nuclear localized protein-1 (Nulp1) increases cell death of human osteosarcoma cells and binds the X-linked inhibitor of apoptosis protein","volume":"366","author":"Steen","year":"2008","journal-title":"Biochem. Biophys. Res. Commun."},{"key":"B33","doi-asserted-by":"publisher","first-page":"446","DOI":"10.1038\/s41586-018-0022-5","article-title":"Vms1 and ANKZF1 peptidyl-tRNA hydrolases release nascent chains from stalled ribosomes","volume":"557","author":"Verma","year":"2018","journal-title":"Nature"},{"key":"B34","doi-asserted-by":"publisher","first-page":"309","DOI":"10.1186\/s12870-018-1529-5","article-title":"Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat","volume":"18","author":"Wei","year":"2018","journal-title":"BMC Plant Biol."},{"key":"B35","volume-title":"World Malaria Report 2023","year":"2024"},{"key":"B36","doi-asserted-by":"publisher","first-page":"e016419","DOI":"10.1161\/jaha.120.016419","article-title":"NULP1 alleviates cardiac hypertrophy by suppressing NFAT3 transcriptional activity","volume":"9","author":"Zhang","year":"2020","journal-title":"J. Am. Heart Assoc."},{"key":"B37","doi-asserted-by":"publisher","DOI":"10.1126\/science.aap7847","article-title":"Uncovering the essential genes of the human malaria parasite Plasmodium falciparum by saturation mutagenesis","volume":"360","author":"Zhang","year":"2018","journal-title":"Science"},{"key":"B38","doi-asserted-by":"publisher","first-page":"2197","DOI":"10.1038\/s41467-018-04564-3","article-title":"Vms1p is a release factor for the ribosome-associated quality control complex","volume":"9","author":"Zurita Rend\u00f3n","year":"2018","journal-title":"Nat. Commun."}],"container-title":["Frontiers in Cellular and Infection Microbiology"],"original-title":[],"link":[{"URL":"https:\/\/www.frontiersin.org\/articles\/10.3389\/fcimb.2025.1652542\/full","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,24]],"date-time":"2025-10-24T05:26:51Z","timestamp":1761283611000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.frontiersin.org\/articles\/10.3389\/fcimb.2025.1652542\/full"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,10,24]]},"references-count":38,"alternative-id":["10.3389\/fcimb.2025.1652542"],"URL":"https:\/\/doi.org\/10.3389\/fcimb.2025.1652542","relation":{},"ISSN":["2235-2988"],"issn-type":[{"value":"2235-2988","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,10,24]]},"article-number":"1652542"}}