{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,6]],"date-time":"2026-07-06T12:57:50Z","timestamp":1783342670677,"version":"3.54.6"},"reference-count":59,"publisher":"Frontiers Media SA","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Front. Microbiol."],"DOI":"10.3389\/fmicb.2014.00197","type":"journal-article","created":{"date-parts":[[2014,5,5]],"date-time":"2014-05-05T06:55:12Z","timestamp":1399272912000},"source":"Crossref","is-referenced-by-count":91,"title":["Conversion of crude oil to methane by a microbial consortium enriched from oil reservoir production waters"],"prefix":"10.3389","volume":"5","author":[{"given":"Carolina","family":"Berdugo-Clavijo","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lisa M.","family":"Gieg","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2014,5,5]]},"reference":[{"key":"B1","doi-asserted-by":"publisher","first-page":"1285","DOI":"10.1021\/es203748b","article-title":"Toluene depletion in produced oil contributes to souring control in a field subjected to nitrate injection","volume":"46","author":"Agrawal","year":"2012","journal-title":"Environ. Sci. Technol"},{"key":"B2","doi-asserted-by":"publisher","first-page":"162","DOI":"10.1016\/j.gca.2013.01.031","article-title":"Evidence that crude oil alkane activation proceeds by different mechanisms under sulfate-reducing and methanogenic conditions","volume":"109","author":"Aitken","year":"2013","journal-title":"Geochim. Cosmochim. Acta"},{"key":"B3","doi-asserted-by":"publisher","first-page":"10708","DOI":"10.1021\/es4020184","article-title":"Metagenomics of hydrocarbon resource environments indicate aerobic taxa and genes to be unexpectedly common","volume":"47","author":"An","year":"2013","journal-title":"Environ. Sci. Technol"},{"key":"B4","doi-asserted-by":"publisher","first-page":"722","DOI":"10.1038\/35008145","article-title":"Hexadecane decay by methanogenesis","volume":"404","author":"Anderson","year":"2000","journal-title":"Nature"},{"key":"B5","doi-asserted-by":"publisher","first-page":"3977","DOI":"10.1021\/es025556w","article-title":"A real-time polymerase chain reaction method for monitoring anaerobic, hydrocarbon-degrading bacteria based on a catabolic gene","volume":"36","author":"Beller","year":"2002","journal-title":"Environ. Sci. Technol"},{"key":"B6","doi-asserted-by":"publisher","first-page":"124","DOI":"10.1111\/j.1574-6941.2012.01328.x","article-title":"Methanogenic biodegradation of two-ringed polycyclic aromatic hydrocarbons","volume":"81","author":"Berdugo-Clavijo","year":"2012","journal-title":"FEMS Microbiol. Ecol"},{"key":"B7","doi-asserted-by":"publisher","first-page":"661","DOI":"10.1111\/j.1432-1033.1996.0661w.x","article-title":"Evidence that anaerobic oxidation of toluene in the denitrifying bacterium Thauera aromatica is initiated by formation of benzylsuccinate from toluene and fumarate","volume":"238","author":"Biegert","year":"1996","journal-title":"Eur. J. Biochem"},{"key":"B8","doi-asserted-by":"publisher","first-page":"18572","DOI":"10.3390\/ijms140918572","article-title":"Archaeal diversity in biofilm technologies applied to treat urban and industrial wastewater: recent advances and future prospects","volume":"14","author":"Calder\u00c3\u00b3n","year":"2013","journal-title":"Int. J. Mol. Sci"},{"key":"B9","doi-asserted-by":"publisher","first-page":"506","DOI":"10.1016\/j.copbio.2012.08.012","article-title":"Metabolomic investigations of anaerobic hydrocarbon-impacted environments","volume":"24","author":"Callaghan","year":"2013","journal-title":"Curr. Opin. Biotechnol"},{"key":"B10","doi-asserted-by":"publisher","first-page":"7287","DOI":"10.1021\/es1002023","article-title":"Diversity of benzyl- and alkylsuccinate synthase genes in hydrocarbon-impacted environments and enrichment cultures","volume":"44","author":"Callaghan","year":"2010","journal-title":"Environ. Sci. Technol"},{"key":"B11","doi-asserted-by":"publisher","first-page":"4274","DOI":"10.1128\/AEM.02896-05","article-title":"Comparison of mechanisms of alkane metabolism under sulfate-reducing conditions among two bacterial isolates and a bacterial consortium","volume":"72","author":"Callaghan","year":"2006","journal-title":"Appl. Environ. Microbiol"},{"key":"B12","doi-asserted-by":"publisher","first-page":"425","DOI":"10.1007\/s10529-005-6073-3","article-title":"Polycyclic aromatic hydrocarbon (PAH) degradation coupled to methanogenesis","volume":"28","author":"Chang","year":"2006","journal-title":"Biotechnol. Lett"},{"key":"B13","doi-asserted-by":"publisher","first-page":"e66784","DOI":"10.1371\/journal.pone.0066784","article-title":"DNA-SIP reveals that Syntrophaceae play an important role in methanogenic hexadecane degradation","volume":"8","author":"Cheng","year":"2013","journal-title":"PLoS ONE"},{"key":"B14","doi-asserted-by":"publisher","first-page":"442","DOI":"10.1038\/ismej.2007.111","article-title":"Thermodynamic constraints on methanogenic crude oil biodegradation","volume":"2","author":"Dolfing","year":"2007","journal-title":"ISME J"},{"key":"B15","doi-asserted-by":"publisher","DOI":"10.1111\/1462-2920.12325","article-title":"Halomonas sulfidaeris-dominated microbial community inhabits a 1.8 km-deep subsurface Cambrian Sandstone reservoir","author":"Dong","year":"2013","journal-title":"Environ. Microbiol"},{"key":"B16","doi-asserted-by":"crossref","first-page":"313","DOI":"10.1128\/AEM.60.1.313-322.1994","article-title":"Anaerobic degradation of toluene and o-xylene by a methanogenic consortium","volume":"60","author":"Edwards","year":"1994","journal-title":"Appl. Environ. Microbiol"},{"key":"B17","doi-asserted-by":"publisher","first-page":"432","DOI":"10.1139\/m81-066","article-title":"Microbial degradation of aromatics and saturates in Prudhoe Bay crude oil as determined by glass capillary gas chromatography","volume":"27","author":"Fedorak","year":"1981","journal-title":"Can. J. Microbiol"},{"key":"B18","doi-asserted-by":"publisher","first-page":"93","DOI":"10.1159\/000121324","article-title":"Anaerobic biodegradation of aromatic hydrocarbons: pathways and prospects","volume":"15","author":"Foght","year":"2008","journal-title":"Mol. Microbiol. Biotechnol"},{"key":"B19","doi-asserted-by":"publisher","first-page":"754","DOI":"10.1111\/j.1462-2920.2011.02631.x","article-title":"Methanogenic toluene metabolism: community structure and intermediates","volume":"14","author":"Fowler","year":"2012","journal-title":"Environ. Microbiol"},{"key":"B20","doi-asserted-by":"publisher","first-page":"3074","DOI":"10.1111\/j.1462-2920.2010.02282.x","article-title":"Methanogenesis, sulfate reduction and crude oil biodegradation in hot Alaskan oilfields","volume":"12","author":"Gieg","year":"2010","journal-title":"Environ. Microbiol"},{"key":"B21","doi-asserted-by":"publisher","first-page":"3022","DOI":"10.1128\/aem.00119-08","article-title":"Bioenergy production via microbial conversion of residual oil to natural gas","volume":"74","author":"Gieg","year":"2008","journal-title":"Appl. Environ. Microbiol"},{"key":"B22","doi-asserted-by":"publisher","first-page":"3775","DOI":"10.1021\/es0205333","article-title":"Detection of anaerobic metabolites of saturated and aromatic hydrocarbons in petroleum-contaminated aquifers","volume":"36","author":"Gieg","year":"2002","journal-title":"Environ. Sci. Technol"},{"key":"B23","doi-asserted-by":"publisher","first-page":"232","DOI":"10.1111\/j.1745-6584.1992.tb01795.x","article-title":"Methanogenic biodegradation of creosote contaminants in natural and simulated ground-water ecosystems","volume":"30","author":"Godsy","year":"1992","journal-title":"Ground Water"},{"key":"B24","doi-asserted-by":"publisher","first-page":"511","DOI":"10.1007\/s00792-009-0237-3","article-title":"Biogenic methane production in formation waters from a large gas field in the North Sea","volume":"13","author":"Gray","year":"2009","journal-title":"Extremophiles"},{"key":"B25","doi-asserted-by":"publisher","first-page":"2957","DOI":"10.1111\/j.1462-2920.2011.02570.x","article-title":"The quantitative significance of Syntrophaceae and syntrophic partnerships in methanogenic degradation of crude oil alkanes","volume":"13","author":"Gray","year":"2011","journal-title":"Environ. Microbiol"},{"key":"B26","doi-asserted-by":"publisher","first-page":"137","DOI":"10.1016\/S0065-2164(10)72005-0","article-title":"Methanogenic degradation of petroleum hydrocarbons in subsurface environments: remediation, heavy oil formation, and energy recovery","volume":"72","author":"Gray","year":"2010","journal-title":"Adv. Appl. Microbiol"},{"key":"B27","doi-asserted-by":"crossref","first-page":"254","DOI":"10.1128\/AEM.53.2.254-260.1987","article-title":"Transformation of toluene and benzene by mixed methanogenic cultures","volume":"53","author":"Grbic'-Galic'","year":"1987","journal-title":"Appl. Environ. Microbiol"},{"key":"B28","doi-asserted-by":"publisher","first-page":"4324","DOI":"10.1128\/aem.00419-08","article-title":"Competitive oxidation of volatile fatty acids by sulfate- and nitrate-reducing bacteria from an oil field in Argentina","volume":"74","author":"Grigoryan","year":"2008","journal-title":"Appl. Environ. Microbiol"},{"key":"B29","doi-asserted-by":"publisher","first-page":"1197","DOI":"10.1016\/j.orggeochem.2008.02.010","article-title":"Metabolism of n-alkanes and n-alkenes by anaerobic bacteria: a summary","volume":"39","author":"Grossi","year":"2008","journal-title":"Org. Geochem"},{"key":"B30","doi-asserted-by":"publisher","first-page":"e67717","DOI":"10.1371\/journal.pone.0067717","article-title":"Role of bacterial exopolysaccharides (EPS) in the fate of the oil released during the deepwater horizon oil spill","volume":"8","author":"Gutierrez","year":"2013","journal-title":"PLoS ONE"},{"key":"B31","doi-asserted-by":"publisher","first-page":"176","DOI":"10.1038\/nature06484","article-title":"Crude-oil biodegradation via methanogenesis in subsurface petroleum reservoirs","volume":"451","author":"Jones","year":"2008","journal-title":"Nature"},{"key":"B32","doi-asserted-by":"publisher","first-page":"793","DOI":"10.1007\/s10532-010-9344-1","article-title":"Assessing the correlation between anaerobic toluene degradation activity and bssA concentrations in hydrocarbon-contaminated aquifer material","volume":"21","author":"Kazy","year":"2010","journal-title":"Biodegradation"},{"key":"B33","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1111\/j.1574-6968.2006.00280.x","article-title":"Dynamics of development and dispersal in sessile microbial communities: examples from Pseudomonas aeruginosa and Pseudomonas putida model biofilms","volume":"261","author":"Klausen","year":"2006","journal-title":"FEMS Microbiol. Lett"},{"key":"B34","doi-asserted-by":"publisher","first-page":"851","DOI":"10.1007\/s00253-012-4025-0","article-title":"Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers","volume":"94","author":"Kleinsteuber","year":"2012","journal-title":"Appl. Microbiol. Biotechnol"},{"key":"B35","doi-asserted-by":"publisher","first-page":"5393","DOI":"10.1128\/AEM.66.12.5393-5398.2000","article-title":"Anaerobic oxidation of n-dodecane by an addition reaction in a sulfate-reducing bacterial enrichment culture","volume":"66","author":"Kropp","year":"2000","journal-title":"Appl. Environ. Microbiol"},{"key":"B36","doi-asserted-by":"publisher","first-page":"513","DOI":"10.1007\/s00203-012-0788-z","article-title":"Microbial biodiversity in a Malaysian oil field and a systematic comparison with oil reservoirs worldwide","volume":"194","author":"Li","year":"2012","journal-title":"Arch. Microbiol"},{"key":"B37","doi-asserted-by":"publisher","first-page":"554","DOI":"10.1016\/S1002-0160(09)60149-1","article-title":"Evaluation of biological characteristics of bacteria contributing to biofilm formation","volume":"19","author":"Li","year":"2009","journal-title":"Pedosphere"},{"key":"B38","doi-asserted-by":"publisher","first-page":"395","DOI":"10.1007\/s10482-005-9043-9","article-title":"Halomonas maura is a physiologically versatile bacterium of both ecological and biotechnological interest","volume":"89","author":"Llamas","year":"2006","journal-title":"Antonie van Leeuwenhoek"},{"key":"B39","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.ibiod.2010.11.009","article-title":"Microbial communities involved in anaerobic degradation of alkanes","volume":"65","author":"Mbadinga","year":"2011","journal-title":"Int. Biodeterior. Biodegradation"},{"key":"B40","doi-asserted-by":"publisher","first-page":"129","DOI":"10.1007\/bf00411351","article-title":"Anaerobic bacterium that degrades fatty acids in syntrophic association with methanogens","volume":"122","author":"McInerney","year":"1979","journal-title":"Arch. Microbiol"},{"key":"B41","doi-asserted-by":"publisher","first-page":"959","DOI":"10.1016\/j.resmic.2013.07.004","article-title":"Microbial methanogenesis in subsurface oil and coal","volume":"164","author":"Mesl\u00c3\u00a9","year":"2013","journal-title":"Res. Microbiol"},{"key":"B42","doi-asserted-by":"publisher","first-page":"785","DOI":"10.1111\/j.1365-2672.2009.04251.x","article-title":"Isolation and characterization of Halomonas sp. strain C2SS100, a hydrocarbon-degrading bacterium under hypersaline conditions","volume":"107","author":"Mnif","year":"2009","journal-title":"J. Appl. Microbiol"},{"key":"B43","doi-asserted-by":"publisher","first-page":"217","DOI":"10.1038\/45686","article-title":"Cracking anaerobic bacteria","volume":"401","author":"Parkes","year":"1999","journal-title":"Nature"},{"key":"B44","doi-asserted-by":"publisher","first-page":"341","DOI":"10.1111\/j.1574-6941.1999.tb00625.x","article-title":"Interactions between methanogenic and nitrate reducing bacteria during the anaerobic digestion of an industrial sulfate rich wastewater","volume":"29","author":"Percheron","year":"1999","journal-title":"FEMS Microbiol. Ecol"},{"key":"B45","doi-asserted-by":"publisher","first-page":"566","DOI":"10.1002\/jobm.201100253","article-title":"Biofilm formation in moderately halophilic bacteria is influenced by varying salinity levels","volume":"52","author":"Qurashi","year":"2012","journal-title":"J. Basic Microbiol"},{"key":"B46","doi-asserted-by":"publisher","first-page":"1707","DOI":"10.1128\/JB.183.5.1707-1715.2001","article-title":"Anaerobic initial reaction of n-alkanes in a denitrifying bacterium: evidence for (1-methylpentyl)succinate as initial product and for involvement of an organic radical in n-hexane metabolism","volume":"183","author":"Rabus","year":"2001","journal-title":"J. Bacteriol"},{"key":"B47","doi-asserted-by":"crossref","first-page":"262","DOI":"10.1128\/.61.2.262-280.1997","article-title":"Energetics of syntrophic cooperation in methanogenic degradation","volume":"61","author":"Schink","year":"1997","journal-title":"Microbiol. Mol. Biol. Rev"},{"key":"B48","doi-asserted-by":"publisher","first-page":"393","DOI":"10.1016\/j.jbiotec.2013.07.004","article-title":"Phoenix 2: a locally installable large-scale 16S rRNA gene sequence analysis pipeline with Web interface","volume":"167","author":"Soh","year":"2013","journal-title":"J. Biotechnol"},{"key":"B49","doi-asserted-by":"publisher","first-page":"189","DOI":"10.1007\/s10532-013-9651-4","article-title":"Presence, diversity and enumeration of functional genes (bssA and bamA) relating to toluene degradation across a range of redox conditions and inoculum sources","volume":"25","author":"Sun","year":"2014","journal-title":"Biodegradation"},{"key":"B50","doi-asserted-by":"publisher","first-page":"2028","DOI":"10.1021\/ja01332a039","article-title":"The methane fermentation of carbohydrates","volume":"55","author":"Symons","year":"1933","journal-title":"J. Am. Chem. Soc"},{"key":"B51","doi-asserted-by":"publisher","first-page":"599","DOI":"10.1139\/gen-2013-0069","article-title":"Metagenomic analysis of an anaerobic alkane-degrading microbial culture: potential hydrocarbon-activating pathways and inferred roles of community members","volume":"56","author":"Tan","year":"2013","journal-title":"Genome"},{"key":"B52","doi-asserted-by":"publisher","first-page":"5213","DOI":"10.1021\/es0264495","article-title":"Anaerobic oxidation of crude oil hydrocarbons by the resident microorganisms of a contaminated anoxic aquifer","volume":"37","author":"Townsend","year":"2003","journal-title":"Environ. Sci. Technol"},{"key":"B53","doi-asserted-by":"publisher","first-page":"92","DOI":"10.1046\/j.1462-2920.2003.00390.x","article-title":"Physiological and molecular characterization of anaerobic benzene-degrading mixed cultures","volume":"5","author":"Ulrich","year":"2003","journal-title":"Environ. Microbiol"},{"key":"B54","doi-asserted-by":"publisher","first-page":"1367","DOI":"10.1128\/aem.01904-06","article-title":"Identification and expression of benzylsuccinate synthase genes in a toluene-degrading methanogenic consortium","volume":"73","author":"Washer","year":"2007","journal-title":"Appl. Environ. Microbiol"},{"key":"B55","doi-asserted-by":"crossref","first-page":"1997","DOI":"10.1007\/978-3-540-77587-4_146","article-title":"Anaerobic hydrocarbon-degrading microorganisms: an overview","volume-title":"Handbook of Hydrocarbon and Lipid Microbiology","author":"Widdel","year":"2010"},{"key":"B56","doi-asserted-by":"publisher","first-page":"266","DOI":"10.1038\/45777","article-title":"Methane formation from long-chain alkanes by anaerobic microorganisms","volume":"401","author":"Zengler","year":"1999","journal-title":"Nature"},{"key":"B57","doi-asserted-by":"publisher","first-page":"760","DOI":"10.1038\/srep00760","article-title":"Microbial diversity in long-term water-flooded oil reservoirs with different in situ temperatures in China","volume":"2","author":"Zhang","year":"2012a","journal-title":"Sci. Rep"},{"key":"B58","doi-asserted-by":"publisher","first-page":"221","DOI":"10.1007\/s10532-011-9501-1","article-title":"Stable isotope probing identifies anthracene degraders under methanogenic conditions","volume":"23","author":"Zhang","year":"2012b","journal-title":"Biodegradation"},{"key":"B59","doi-asserted-by":"publisher","first-page":"1680","DOI":"10.1007\/s10646-012-0949-5","article-title":"Analyses of n-alkanes degrading community dynamics of a high-temperature methanogenic consortium enriched from production water of a petroleum reservoir by a combination of molecular techniques","volume":"21","author":"Zhou","year":"2012","journal-title":"Ecotoxicology"}],"container-title":["Frontiers in Microbiology"],"original-title":[],"deposited":{"date-parts":[[2020,8,18]],"date-time":"2020-08-18T20:53:14Z","timestamp":1597783994000},"score":1,"resource":{"primary":{"URL":"http:\/\/journal.frontiersin.org\/article\/10.3389\/fmicb.2014.00197\/abstract"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014,5,5]]},"references-count":59,"URL":"https:\/\/doi.org\/10.3389\/fmicb.2014.00197","relation":{},"ISSN":["1664-302X"],"issn-type":[{"value":"1664-302X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2014,5,5]]}}}