{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T14:53:40Z","timestamp":1788274420484,"version":"build-2803163510"},"reference-count":93,"publisher":"Frontiers Media SA","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Front. Microbiol."],"DOI":"10.3389\/fmicb.2014.00375","type":"journal-article","created":{"date-parts":[[2014,7,24]],"date-time":"2014-07-24T15:04:09Z","timestamp":1406214249000},"source":"Crossref","is-referenced-by-count":46,"title":["De novo assembly of Aureococcus anophagefferens transcriptomes reveals diverse responses to the low nutrient and low light conditions present during blooms"],"prefix":"10.3389","volume":"5","author":[{"given":"Kyle R.","family":"Frischkorn","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Matthew J.","family":"Harke","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christopher J.","family":"Gobler","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sonya T.","family":"Dyhrman","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2014,7,24]]},"reference":[{"issue":"385","key":"B1","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2012.00385","article-title":"Identifying reference genes with stable expression from high throughput sequence data","volume":"3","author":"Alexander","year":"2012","journal-title":"Front. Microbiol"},{"key":"B2","doi-asserted-by":"publisher","first-page":"203","DOI":"10.1038\/nature10074","article-title":"Evolution and metabolic significance of the urea cycle in photosynthetic diatoms","volume":"473","author":"Allen","year":"2011","journal-title":"Nature"},{"key":"B3","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","article-title":"Basic local alignment search tool","volume":"215","author":"Altschul","year":"1990","journal-title":"J. Mol. Biol"},{"key":"B4","doi-asserted-by":"publisher","first-page":"704","DOI":"10.1007\/BF02804901","article-title":"Harmful algal blooms and eutrophication: nutrient sources, composition, and consequences","volume":"25","author":"Anderson","year":"2002","journal-title":"Estuaries"},{"key":"B5","doi-asserted-by":"crossref","first-page":"139","DOI":"10.1007\/BF02787848","article-title":"Effect of light irradiance on the production of sulfolipids from Anabaena 7120 in a fed-batch photobioreactor","volume":"67","author":"Archer","year":"1997","journal-title":"Appl. Biochem. Biotechnol"},{"key":"B6","doi-asserted-by":"publisher","first-page":"79","DOI":"10.1126\/science.1101156","article-title":"The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism","volume":"306","author":"Armbrust","year":"2004","journal-title":"Science"},{"key":"B7","doi-asserted-by":"publisher","first-page":"138D","DOI":"10.1093\/nar\/gkh121","article-title":"The Pfam protein families database","volume":"32","author":"Bateman","year":"2004","journal-title":"Nucleic Acids Res"},{"issue":"3","key":"B8","doi-asserted-by":"publisher","DOI":"10.3389\/fmars.2014.00003","article-title":"Transcriptional responses of three model diatoms to nitrate limitation of growth","volume":"1","author":"Bender","year":"2014","journal-title":"Front.Mar. Sci"},{"key":"B9","doi-asserted-by":"publisher","first-page":"1235","DOI":"10.1111\/j.1529-8817.2008.00571.x","article-title":"Understanding nitrogen limitation in Aureococcus anophagefferens (Pelagophyceae) through cDNA and qRT-PCR analysis","volume":"44","author":"Berg","year":"2008","journal-title":"J. Phycol"},{"key":"B10","doi-asserted-by":"publisher","first-page":"2872","DOI":"10.1093\/bioinformatics\/btp367","article-title":"De novo transcriptome assembly with ABySS","volume":"25","author":"Birol","year":"2009","journal-title":"Bioinformatics"},{"key":"B11","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/s12237-013-9683-3","article-title":"Interannual variability influences brown tide (Aureococcus anophagefferens) blooms in coastal embayments","volume":"37","author":"Boneillo","year":"2013","journal-title":"Estuaries Coasts"},{"key":"B12","doi-asserted-by":"crossref","first-page":"1518","DOI":"10.1139\/b81-207","article-title":"Resistance to arsenate toxicity in the blue-green alga Synechococcus leopoliensis","volume":"59","author":"Budd","year":"1981","journal-title":"Botany"},{"key":"B13","doi-asserted-by":"publisher","first-page":"421","DOI":"10.1186\/1471-2105-10-421","article-title":"BLAST+: architecture and applications","volume":"10","author":"Camacho","year":"2009","journal-title":"BMC Bioinformatics"},{"key":"B14","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1155\/2010\/187373","article-title":"Functional promiscuity of homologues of the bacterial ArsA ATPases","volume":"2010","author":"Castillo","year":"2010","journal-title":"Int. J. Microbiol"},{"key":"B15","doi-asserted-by":"crossref","first-page":"355","DOI":"10.1111\/j.1574-6976.1994.tb00145.x","article-title":"Resistance to arsenic compounds in microorganisms","volume":"15","author":"Cervantes","year":"1994","journal-title":"FEMS Microbiol. Rev"},{"key":"B16","doi-asserted-by":"publisher","first-page":"754","DOI":"10.1128\/AEM.69.2.754-759.2003","article-title":"Identification of a high-affinity phosphate transporter gene in a Prasinophyte alga, Tetraselmis chui, and its expression under nutrient limitation (2003)","volume":"69","author":"Chung","year":"2003","journal-title":"Appl. Environ. Microbiol"},{"key":"B17","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1029\/2005GC001159","article-title":"Biogeochemistry of arsenic and antimony in the North Pacific Ocean","volume":"7","author":"Cutter","year":"2006","journal-title":"Geochem. Geophys. Geosyst"},{"key":"B18","doi-asserted-by":"crossref","first-page":"509","DOI":"10.1111\/j.1529-8817.1989.tb00256.x","article-title":"Survival of Scenedesmus acuminatus (Chlorophyceae) in darkness","volume":"25","author":"Dehning","year":"1989","journal-title":"J. Phycol"},{"key":"B19","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1016\/S0022-0981(98)00193-2","article-title":"Growth and biomass stimulation of the toxic dinoflagellate Gymnodinium catenatum (Graham) by dissolved organic substances","volume":"236","author":"Doblin","year":"1999","journal-title":"J. Exp. Mar. Biol. Ecol"},{"key":"B21","doi-asserted-by":"publisher","first-page":"619","DOI":"10.1016\/j.hal.2004.08.011","article-title":"Ectoenzymes in Prorocentrum minimum","volume":"4","author":"Dyhrman","year":"2005","journal-title":"Harmful Algae"},{"key":"B22","doi-asserted-by":"publisher","first-page":"252","DOI":"10.1128\/AEM.72.1.252-260.2006","article-title":"Long serial analysis of gene expression for gene discovery and transcriptome profiling in the widespread marine coccolithophore Emiliania huxleyi","volume":"72","author":"Dyhrman","year":"2006","journal-title":"Appl. Env. Microbiol"},{"key":"B24","doi-asserted-by":"publisher","first-page":"e33768","DOI":"10.1371\/journal.pone.0033768","article-title":"The transcriptome and proteome of the diatom Thalassiosira pseudonana reveal a diverse phosphorus stress response","volume":"7","author":"Dyhrman","year":"2012","journal-title":"PLoS ONE"},{"key":"B20","doi-asserted-by":"crossref","first-page":"3205","DOI":"10.1128\/AEM.65.7.3205-3212.1999","article-title":"Phosphate stress in cultures and field populations of the dinoflagellate Prorocentrum minimum detected by a single-cell alkaline phosphatase assay","volume":"65","author":"Dyhrman","year":"1999","journal-title":"Appl. Env. Microbiol"},{"key":"B23","doi-asserted-by":"publisher","first-page":"1381","DOI":"10.4319\/lo.2006.51.3.1381","article-title":"Presence and regulation of alkaline phosphatase activity in eukaryotic phytoplankton from the coastal ocean: Implications for dissolved organic phosphorus remineralization","volume":"51","author":"Dyhrman","year":"2006","journal-title":"Limnol. Oceangr"},{"key":"B25","doi-asserted-by":"publisher","first-page":"3150","DOI":"10.1093\/bioinformatics\/bts565","article-title":"CD-HIT: accelerated for clustering the next-generation sequencing data","volume":"28","author":"Fu","year":"2012","journal-title":"Bioinformatics"},{"key":"B26","doi-asserted-by":"publisher","first-page":"4352","DOI":"10.1073\/pnas.1016106108","article-title":"Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics","volume":"108","author":"Gobler","year":"2011","journal-title":"Proc. Natl. Acad. Sci. U.S.A"},{"key":"B27","doi-asserted-by":"publisher","first-page":"31","DOI":"10.3354\/ame035031","article-title":"Nutrient limitation, organic matter cycling, and plankton dynamics during an Aureococcus anophagefferens bloom","volume":"35","author":"Gobler","year":"2004","journal-title":"Aquatic Microbial Ecol"},{"key":"B28","doi-asserted-by":"publisher","first-page":"726","DOI":"10.1007\/BF02732911","article-title":"A review of the causes, effects, and potential management of harmful brown tide blooms caused by Aureococcus anophagefferens (Hargraves et sieburth)","volume":"28","author":"Gobler","year":"2005","journal-title":"Estuaries"},{"key":"B29","doi-asserted-by":"publisher","first-page":"36","DOI":"10.1016\/j.hal.2011.10.013","article-title":"Ecosystem disruptive algal blooms of the brown tide species, Aureococcus anophagefferens and Aureoumbra lagunensis","volume":"14","author":"Gobler","year":"2012","journal-title":"Harmful Algae"},{"key":"B30","doi-asserted-by":"crossref","first-page":"21","DOI":"10.3354\/meps164021","article-title":"Detection and quantification of alkaline phosphatase in single cells of phosphorus-starved marine phytoplankton","volume":"164","author":"Gonzalez-Gil","year":"1998","journal-title":"Mar. Ecol. Prog. Ser"},{"key":"B31","doi-asserted-by":"publisher","first-page":"903","DOI":"10.1006\/jmbi.2001.5080","article-title":"Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure","volume":"313","author":"Gough","year":"2001","journal-title":"J. Mol. Biol"},{"key":"B32","doi-asserted-by":"publisher","first-page":"644","DOI":"10.1038\/nbt.1883","article-title":"Full-length transcriptome assembly from RNA-Seq data without a reference genome","volume":"29","author":"Grabherr","year":"2011","journal-title":"Nat. Biotechnol"},{"key":"B33","doi-asserted-by":"crossref","first-page":"91","DOI":"10.1007\/BF00354603","article-title":"Factors affecting the photosynthetic capacity of laboratory cultures of the diatom Phaeodactylum tricornutum","volume":"21","author":"Griffiths","year":"1973","journal-title":"Mar. Biol"},{"key":"B34","doi-asserted-by":"crossref","first-page":"725","DOI":"10.1128\/MMBR.57.3.725-749.1993","article-title":"The phycobilisome, a light-harvesting complex responsive to environmental conditions","volume":"57","author":"Grossman","year":"1993","journal-title":"Microbiol. Rev"},{"key":"B35","doi-asserted-by":"publisher","first-page":"41","DOI":"10.1093\/nar\/29.1.41","article-title":"TIGRFAMs: a protein family resource for the functional identification of proteins","volume":"29","author":"Haft","year":"2001","journal-title":"Nucleic Acids Res"},{"key":"B36","doi-asserted-by":"crossref","first-page":"208","DOI":"10.1007\/BF00393894","article-title":"Carbohydrate metabolism in the marine diatom Skeletonema costatum","volume":"4","author":"Handa","year":"1969","journal-title":"Mar. Biol"},{"key":"B37","doi-asserted-by":"publisher","first-page":"503","DOI":"10.1016\/j.hal.2011.03.005","article-title":"Suspension feeding by the Atlantic slipper limpet (Crepidula fornicata) and the northern quahog (Mercenaria mercenaria) in the presence of cultured and wild populations of the harmful brown tide alga, Aureococcus anophagefferens.","volume":"10","author":"Harke","year":"2011","journal-title":"Harmful Algae"},{"key":"B38","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1016\/j.hal.2008.08.006","article-title":"Eutrophication and harmful algal blooms: a scientific consensus","volume":"8","author":"Heisler","year":"2008","journal-title":"Harmful Algae"},{"key":"B39","doi-asserted-by":"crossref","first-page":"423","DOI":"10.1093\/bioinformatics\/14.5.423","article-title":"Removing near-neighbour redundancy from large protein sequence collections","volume":"14","author":"Holm","year":"1998","journal-title":"Bioinformatics"},{"key":"B40","doi-asserted-by":"crossref","first-page":"299","DOI":"10.3354\/meps011299","article-title":"Significance of exoenzymatic activities in the ecology of brackish water: measurements by means of methylumbelliferyl-substrates","volume":"11","author":"Hoppe","year":"1983","journal-title":"Mar. Ecol. Prog. Ser"},{"key":"B41","doi-asserted-by":"publisher","first-page":"513","DOI":"10.1126\/science.1168120","article-title":"Catalytic core of a membrane-associated eukaryotic polyphosphate polymerase","volume":"324","author":"Hothorn","year":"2009","journal-title":"Science"},{"key":"B42","doi-asserted-by":"crossref","first-page":"868","DOI":"10.1101\/gr.9.9.868","article-title":"CAP3: a DNA sequence assembly program","volume":"9","author":"Huang","year":"1999","journal-title":"Genome Res"},{"key":"B43","first-page":"138","article-title":"ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences","volume":"99","author":"Iseli","year":"1999","journal-title":"Proc. Int. Conf. Intell. Syst. Mol. Biol"},{"key":"B44","doi-asserted-by":"crossref","first-page":"643","DOI":"10.1016\/0043-1354(84)90215-X","article-title":"Nitrate reduction by shaking with cadmium: alternative to cadmium columns","volume":"18","author":"Jones","year":"1984","journal-title":"Water Res"},{"key":"B45","doi-asserted-by":"publisher","first-page":"377","DOI":"10.1016\/j.hal.2004.06.008","article-title":"Stimulation of the brown tide organism, Aureococcus anophagefferens, by selective nutrient additions to in situ mesocosms","volume":"3","author":"Kana","year":"2004","journal-title":"Harmful Algae"},{"key":"B46","doi-asserted-by":"publisher","first-page":"D354","DOI":"10.1093\/nar\/gkj102","article-title":"From genomics to chemical genomics: new developments in KEGG","volume":"34","author":"Kanehisa","year":"2006","journal-title":"Nucleic Acids Res"},{"key":"B47","doi-asserted-by":"publisher","first-page":"e1001889","DOI":"10.1371\/journal.pbio.1001889","article-title":"The marine microbial eukaryote transcriptome sequencing project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing","volume":"12","author":"Keeling","year":"2014","journal-title":"PLoS Biol"},{"key":"B48","doi-asserted-by":"publisher","first-page":"398","DOI":"10.1111\/nph.12160","article-title":"Transcriptomic analysis of metabolic function in the giant kelp, Macrocystis pyrifera, across depth and season","volume":"198","author":"Konotchick","year":"2013","journal-title":"New Phytol"},{"key":"B49","doi-asserted-by":"publisher","first-page":"357","DOI":"10.1038\/nmeth.1923","article-title":"Fast gapped-read alignment with Bowtie 2","volume":"9","author":"Langmead","year":"2012","journal-title":"Nature"},{"key":"B50","doi-asserted-by":"crossref","first-page":"504","DOI":"10.1104\/pp.93.2.504","article-title":"Response to phosphate deprivation in Brassica nigra suspension cells : enhancement of intracellular, cell surface, and secreted phosphatase activities compared to increases in pi-absorption rate","volume":"93","author":"Lefebvre","year":"1990","journal-title":"Plant Physiol"},{"key":"B51","doi-asserted-by":"crossref","first-page":"383","DOI":"10.1016\/0968-0004(96)10048-7","article-title":"Signaling phosphate starvation","volume":"21","author":"Lenburg","year":"1996","journal-title":"Trends Biochem. Sci"},{"key":"B52","doi-asserted-by":"publisher","first-page":"713","DOI":"10.1093\/bioinformatics\/btn025","article-title":"SOAP: short oligonucleotide alignment program","volume":"24","author":"Li","year":"2008","journal-title":"Bioinformatics"},{"key":"B53","doi-asserted-by":"publisher","first-page":"1658","DOI":"10.1093\/bioinformatics\/btl158","article-title":"Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences","volume":"22","author":"Li","year":"2006","journal-title":"Bioinformatics"},{"key":"B54","doi-asserted-by":"publisher","first-page":"e52403","DOI":"10.1371\/journal.pone.0052403","article-title":"A comprehensive evaluation of alignment algorithms in the context of RNA-seq","volume":"7","author":"Lindner","year":"2012","journal-title":"PLoS ONE"},{"key":"B55","doi-asserted-by":"publisher","first-page":"W622","DOI":"10.1093\/nar\/gks540","article-title":"RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics","volume":"40","author":"Lohse","year":"2012","journal-title":"Nucleic Acids Res"},{"key":"B56","doi-asserted-by":"publisher","first-page":"ii103","DOI":"10.1093\/bioinformatics\/btg1067","article-title":"Modeling sequencing errors by combining Hidden Markov models","volume":"19","author":"Lottaz","year":"2003","journal-title":"Bioinformatics"},{"key":"B59","doi-asserted-by":"publisher","first-page":"8089","DOI":"10.1073\/pnas.1321719111","article-title":"Accumulation and enhanced cycling of polyphosphate by Sargasso Sea plankton in response to low phosphorus","volume":"111","author":"Martin","year":"2014","journal-title":"Proc. Natl. Acad. Sci. U.S.A"},{"key":"B57","doi-asserted-by":"publisher","first-page":"273","DOI":"10.1128\/AEM.02592-12","article-title":"Fluorometric quantification of polyphosphate in environmental plankton samples: extraction protocols, matrix effects, and nucleic acid interference","volume":"79","author":"Martin","year":"2013","journal-title":"Appl. Environ. Microbiol"},{"key":"B58","doi-asserted-by":"publisher","first-page":"1057","DOI":"10.1038\/ismej.2010.192","article-title":"Phosphorus supply drives rapid turnover of membrane phospholipids in the diatom Thalassiosira pseudonana","volume":"5","author":"Martin","year":"2011","journal-title":"ISME J"},{"key":"B60","doi-asserted-by":"publisher","first-page":"26","DOI":"10.1128\/EC.5.1.26-44.2006","article-title":"Genome-based approaches to understanding phosphorus deprivation responses and PSR1 control in Chlamydomonas reinhardtii. Eukaryot. Cell","volume":"5","author":"Moseley","year":"2006"},{"key":"B61","doi-asserted-by":"publisher","first-page":"e9688","DOI":"10.1371\/journal.pone.0009688","article-title":"Transcriptome profiling of a toxic dinoflagellate reveals a gene-rich protist and a potential impact on gene expression due to bacterial presence","volume":"5","author":"Moustafa","year":"2010","journal-title":"PLoS ONE"},{"key":"B62","doi-asserted-by":"publisher","first-page":"4309","DOI":"10.1091\/mbc.11.12.4309","article-title":"New components of a system for phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis","volume":"11","author":"Ogawa","year":"2000","journal-title":"Mol. Biol. Cell"},{"key":"B63","doi-asserted-by":"publisher","first-page":"7705","DOI":"10.1073\/pnas.0611046104","article-title":"The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation","volume":"104","author":"Palenik","year":"2007","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"B64","volume-title":"A manual of Chemical and Biological Methods for Seawater Analysis","author":"Parsons","year":"1984"},{"key":"B65","doi-asserted-by":"publisher","first-page":"1008","DOI":"10.1111\/j.0022-3646.2003.02-193.x","article-title":"Heavy metal-induced oxidative stress in algae","volume":"39","author":"Pinto","year":"2003","journal-title":"J. Phycol"},{"key":"B66","doi-asserted-by":"publisher","first-page":"738","DOI":"10.1046\/j.1529-8817.2002.01115.x","article-title":"Factors affecting dark survival of the brown tide alga Aureococcus anophagefferens (Pelagophyceae)","volume":"38","author":"Popels","year":"2002","journal-title":"J. Phycol"},{"key":"B67","doi-asserted-by":"publisher","first-page":"32","DOI":"10.1111\/j.1529-8817.2006.00303.x","article-title":"Physiological responses during dark survival and recovery in Aureococcus anophagefferens (Pelagophyceae)","volume":"43","author":"Popels","year":"2007","journal-title":"J. Phycol"},{"key":"B68","doi-asserted-by":"publisher","first-page":"e00305","DOI":"10.1128\/mBio.00305-13","article-title":"The outer surface lipoprotein VolA mediates utilization of exogenous lipids by Vibrio cholerae","volume":"4","author":"Pride","year":"2013","journal-title":"MBio"},{"key":"B69","doi-asserted-by":"publisher","first-page":"212","DOI":"10.1016\/j.aquatox.2013.11.009","article-title":"Is arsenic biotransformation a detoxification mechanism for microorganisms?","volume":"146","author":"Rahman","year":"2014","journal-title":"Aquat. Toxicol"},{"key":"B70","doi-asserted-by":"publisher","first-page":"209","DOI":"10.1038\/nature12221","article-title":"Pan genome of the phytoplankton Emiliania huxleyi underpins its global distribution","volume":"499","author":"Read","year":"2013","journal-title":"Nature"},{"key":"B71","doi-asserted-by":"publisher","first-page":"562","DOI":"10.1038\/nprot.2012.016","article-title":"Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks","volume":"7","author":"Roberts","year":"2012","journal-title":"Nat. Protoc"},{"key":"B72","doi-asserted-by":"crossref","first-page":"329","DOI":"10.1016\/0304-4203(85)90006-4","article-title":"Arsenic geochemistry in Chesapeake Bay: dependence upon anthropogenic inputs and phytoplankton species composition","volume":"17","author":"Sanders","year":"1985","journal-title":"Mar. Chem"},{"key":"B73","doi-asserted-by":"crossref","first-page":"555","DOI":"10.1016\/S0302-3524(80)80075-2","article-title":"The uptake and reduction of arsenic species by marine algae","volume":"10","author":"Sanders","year":"1980","journal-title":"Estuar. Coast. Mar. Sci"},{"key":"B74","doi-asserted-by":"publisher","first-page":"599","DOI":"10.1128\/AEM.71.2.599-608.2005","article-title":"Minireview: genes and enzymes involved in bacterial oxidation and reduction of inorganic arsenic","volume":"71","author":"Silver","year":"2005","journal-title":"Appl. Env. Microbiol"},{"key":"B75","doi-asserted-by":"publisher","first-page":"549","DOI":"10.1101\/gr.126953.111","article-title":"Efficient de novo assembly of large genomes using compressed data structures","volume":"22","author":"Simpson","year":"2012","journal-title":"Genome Res"},{"key":"B76","doi-asserted-by":"publisher","first-page":"1117","DOI":"10.1101\/gr.089532.108","article-title":"ABySS: a parallel assembler for short read sequence data","volume":"19","author":"Simpson","year":"2009","journal-title":"Genome Res"},{"key":"B77","doi-asserted-by":"crossref","first-page":"754","DOI":"10.1104\/pp.90.2.754","article-title":"Compartmentation of peroxisomal enzymes in algae of the group of prasinophyceae: occurrence of possible microbodies without catalase","volume":"90","author":"Stabenau","year":"1989","journal-title":"Plant Physiol"},{"key":"B78","doi-asserted-by":"publisher","first-page":"963","DOI":"10.1111\/j.1529-8817.2006.00261.x","article-title":"Positive feedback and the development and persistence of ecosystem disruptive algal blooms","volume":"42","author":"Sunda","year":"2006","journal-title":"J. Phycol"},{"key":"B79","doi-asserted-by":"publisher","first-page":"1282","DOI":"10.1093\/bioinformatics\/btm098","article-title":"UniRef: comprehensive and non-redundant UniProt reference clusters","volume":"23","author":"Suzek","year":"2007","journal-title":"Bioinformatics"},{"key":"B80","doi-asserted-by":"publisher","first-page":"130","DOI":"10.1182\/blood-2011-11-394072","article-title":"Eri1 regulates microRNA homeostasis and mouse lymphocyte development and antiviral function","volume":"120","author":"Thomas","year":"2012","journal-title":"Blood"},{"key":"B81","doi-asserted-by":"publisher","first-page":"1580","DOI":"10.1038\/ismej.2011.49","article-title":"Transcriptome response of high- and low-light-adapted Prochlorococcus strains to changing iron availability","volume":"5","author":"Thompson","year":"2011","journal-title":"ISME J"},{"key":"B82","doi-asserted-by":"crossref","first-page":"221","DOI":"10.1128\/JB.145.1.221-232.1981","article-title":"Structure and function of the PHO82-pho4 locus controlling the synthesis of repressible acid phosphatase of Saccharomyces cerevisiae","volume":"145","author":"Toh-e","year":"1981","journal-title":"J. Bacteriol"},{"key":"B83","doi-asserted-by":"publisher","first-page":"69","DOI":"10.1038\/nature07659","article-title":"Phytoplankton in the ocean use non-phosphorus lipids in response to phosphorus scarcity","volume":"457","author":"Van Mooy","year":"2009","journal-title":"Nature"},{"key":"B84","doi-asserted-by":"publisher","first-page":"1282","DOI":"10.1104\/pp.106.087171","article-title":"Biochemical and molecular characterization of AtPAP26, a vacuolar purple acid phosphatase up-regulated in phosphate-deprived Arabidopsis suspension cells and seedlings","volume":"142","author":"Veljanovski","year":"2006","journal-title":"Plant Physiol"},{"key":"B85","doi-asserted-by":"publisher","first-page":"1940","DOI":"10.1194\/jlr.M600185-JLR200","article-title":"Characterization of the human patatin-like phospholipase family","volume":"47","author":"Wilson","year":"2006","journal-title":"J. Lipid Res"},{"key":"B86","doi-asserted-by":"publisher","first-page":"564","DOI":"10.1186\/1471-2105-11-564","article-title":"Empirical bayes analysis of sequencing-based transcriptional profiling without replicates","volume":"11","author":"Wu","year":"2010","journal-title":"BMC Bioinformatics"},{"key":"B87","doi-asserted-by":"publisher","first-page":"e28949","DOI":"10.1371\/journal.pone.0028949","article-title":"Proteome changes driven by phosphorus deficiency and recovery in the brown tide-forming alga Aureococcus anophagefferens","volume":"6","author":"Wurch","year":"2011a","journal-title":"PLoS ONE"},{"key":"B88","doi-asserted-by":"publisher","first-page":"468","DOI":"10.1111\/j.1462-2920.2010.02351.x","article-title":"Nutrient-regulated transcriptional responses in the brown tide-forming alga Aureococcus anophagefferens","volume":"13","author":"Wurch","year":"2011b","journal-title":"Environ. Microbiol"},{"key":"B89","doi-asserted-by":"publisher","DOI":"10.1111\/1462-2920.12374","article-title":"Expression of a xanthine and phosphate transporter in cultures and field populations of the harmful alga Aureococcus anophagefferens: tracking nutritional deficiency during brown tides","author":"Wurch","year":"2014","journal-title":"Environ. Microbiol"},{"key":"B90","doi-asserted-by":"crossref","first-page":"15336","DOI":"10.1073\/pnas.96.26.15336","article-title":"Psr1, a nuclear localized protein that regulates phosphorus metabolism in Chlamydomonas","volume":"96","author":"Wykoff","year":"1999","journal-title":"Proc. Natl. Acad. Sci. U.S.A"},{"key":"B91","doi-asserted-by":"publisher","first-page":"1287","DOI":"10.1021\/tx0500530","article-title":"Interactions of sodium selenite, glutathione, arsenic species, and omega class human glutathione transferase","volume":"18","author":"Zakharyan","year":"2005","journal-title":"Chem. Res. Toxicol"},{"key":"B92","doi-asserted-by":"publisher","first-page":"117","DOI":"10.1016\/j.hal.2012.06.007","article-title":"Emergence of brown tides caused by Aureococcus anophagefferens Hargraves et Sieburth in China","volume":"19","author":"Zhang","year":"2012","journal-title":"Harmful Algae"},{"key":"B93","doi-asserted-by":"publisher","first-page":"307","DOI":"10.1093\/bioinformatics\/19.2.307","article-title":"A profile hidden Markov model for signal peptides generated by HMMER","volume":"19","author":"Zhang","year":"2003","journal-title":"Bioinformatics"}],"container-title":["Frontiers in Microbiology"],"original-title":[],"deposited":{"date-parts":[[2020,8,22]],"date-time":"2020-08-22T15:01:22Z","timestamp":1598108482000},"score":1,"resource":{"primary":{"URL":"http:\/\/journal.frontiersin.org\/article\/10.3389\/fmicb.2014.00375\/abstract"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014,7,24]]},"references-count":93,"URL":"https:\/\/doi.org\/10.3389\/fmicb.2014.00375","relation":{},"ISSN":["1664-302X"],"issn-type":[{"value":"1664-302X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2014,7,24]]}}}