{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,18]],"date-time":"2026-08-18T04:19:56Z","timestamp":1787026796710,"version":"build-2736575974"},"reference-count":68,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2022,3,30]],"date-time":"2022-03-30T00:00:00Z","timestamp":1648598400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Microbiol."],"abstract":"<jats:p>\n                    Genomic information for bacteria within the genus\n                    <jats:italic>Rahnella<\/jats:italic>\n                    remains limited.\n                    <jats:italic>Rahnella<\/jats:italic>\n                    sp. JZ-GX1 was previously isolated from the\n                    <jats:italic>Pinus massoniana<\/jats:italic>\n                    rhizosphere in China and shows potential as a plant growth-promoting (PGP) bacterium. In the present work, we combined the GridION Nanopore ONT and Illumina sequencing platforms to obtain the complete genome sequence of strain JZ-GX1, and the application effects of the strain in natural field environment was assessed. The whole genome of\n                    <jats:italic>Rahnella<\/jats:italic>\n                    sp. JZ-GX1 comprised a single circular chromosome (5,472,828 bp, G + C content of 53.53%) with 4,483 protein-coding sequences, 22 rRNAs, and 77 tRNAs. Based on whole genome phylogenetic and average nucleotide identity (ANI) analysis, the JZ-GX1 strain was reidentified as\n                    <jats:italic>R. victoriana<\/jats:italic>\n                    . Genes related to indole-3-acetic acid (IAA), phosphorus solubilization, nitrogen fixation, siderophores, acetoin, 1-aminocyclopropane-1-carboxylate (ACC) deaminase, gamma-aminobutyric acid (GABA) production, spermidine and volatile organic compounds (VOCs) biosynthesis were present in the genome of strain JZ-GX1. In addition, these functions were also confirmed by\n                    <jats:italic>in vitro<\/jats:italic>\n                    experiments. Importantly, compared to uninoculated control plants,\n                    <jats:italic>Pyrus serotina<\/jats:italic>\n                    ,\n                    <jats:italic>Malus spectabilis<\/jats:italic>\n                    ,\n                    <jats:italic>Populus euramericana<\/jats:italic>\n                    (Dode) Guinier cv. \u201cSan Martino\u201d (I-72 poplar) and\n                    <jats:italic>Pinus elliottii<\/jats:italic>\n                    plants inoculated with strain JZ-GX1 showed increased heights and ground diameters. These findings improve our understanding of\n                    <jats:italic>R. victoriana<\/jats:italic>\n                    JZ-GX1 as a potential biofertilizer in agriculture.\n                  <\/jats:p>","DOI":"10.3389\/fmicb.2022.828990","type":"journal-article","created":{"date-parts":[[2022,3,30]],"date-time":"2022-03-30T13:55:14Z","timestamp":1648648514000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":13,"title":["Genome Sequencing of Rahnella victoriana JZ-GX1 Provides New Insights Into Molecular and Genetic Mechanisms of Plant Growth Promotion"],"prefix":"10.3389","volume":"13","author":[{"given":"Wei-Liang","family":"Kong","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wei-Yu","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sheng-Han","family":"Zuo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xiao-Qin","family":"Wu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2022,3,30]]},"reference":[{"key":"B1","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2021.628769","article-title":"Arbuscular mycorrhizal fungi (Rhizophagus clarus) and rhizobacteria (Bacillus subtilis) can improve the clonal propagation and development of teak for commercial plantings.","volume":"12","author":"Alexandre","year":"2021","journal-title":"Front. 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