{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,25]],"date-time":"2026-08-25T06:23:13Z","timestamp":1787638993675,"version":"build-2736575974"},"reference-count":66,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2026,8,25]],"date-time":"2026-08-25T00:00:00Z","timestamp":1787616000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Microbiol."],"abstract":"<jats:p>\n                    <jats:italic>Streptomyces<\/jats:italic>\n                    species are well-known for their potential in biocontrol and plant growth promotion, with the rhizosphere serving a rich reservoir for novel isolates. In this study, a\n                    <jats:italic>Streptomyces<\/jats:italic>\n                    strain (SX92\n                    <jats:sup>T<\/jats:sup>\n                    ) was isolated from the rhizosphere of healthy tobacco plants. In dual-culture assays, SX92\n                    <jats:sup>T<\/jats:sup>\n                    displayed broad-spectrum antagonistic activity against six major fungal pathogens of tobacco, with the highest inhibition (59.22%) against\n                    <jats:italic>Phytophthora nicotianae<\/jats:italic>\n                    , the causal agent of tobacco black shank. Polyphasic taxonomic characterization, combining 16S rRNA gene phylogeny, distinctive physiological traits, chemotaxonomic markers (LL-diaminopimelic acid, major menaquinones MK-10(H\u2084) and MK-9(H\u2088), and predominant fatty acids anteiso-C\u2081\u2085:\u2080 and C\u2081\u2086:\u2080), and genome-based metrics (ANI and dDDH), clearly distinguished SX92\n                    <jats:sup>T<\/jats:sup>\n                    from its closest relatives. Accordingly, strain SX92\n                    <jats:sup>T<\/jats:sup>\n                    is proposed as the type strain of a novel species,\n                    <jats:italic>Streptomyces songxianensis<\/jats:italic>\n                    sp. nov. The genome of SX92\n                    <jats:sup>T<\/jats:sup>\n                    is 9.69\u202fMb in size with a G\u202f+\u202fC content of 71% and contains 26 biosynthetic gene clusters, including one showing 100% similarity to the albaflavenone cluster. In field trials, application of SX92\n                    <jats:sup>T<\/jats:sup>\n                    fermentation broth significantly improved tobacco agronomic traits and reduced black shank incidence by 44.97%. Furthermore, SX92\n                    <jats:sup>T<\/jats:sup>\n                    treatment reshaped the rhizosphere microbiome by enriching beneficial bacteria such as\n                    <jats:italic>Flavobacterium<\/jats:italic>\n                    and altering the relative abundance of specific fungi, including a reduction in the arbuscular mycorrhizal fungus\n                    <jats:italic>Rhizophagus irregularis<\/jats:italic>\n                    . It also shifted soil enzyme activities, with increased cellulase and decreased catalase levels. These findings establish\n                    <jats:italic>Streptomyces songxianensis<\/jats:italic>\n                    SX92\n                    <jats:sup>T<\/jats:sup>\n                    as a promising multifunctional biocontrol agent for sustainable tobacco production.\n                  <\/jats:p>","DOI":"10.3389\/fmicb.2026.1820235","type":"journal-article","created":{"date-parts":[[2026,8,25]],"date-time":"2026-08-25T05:36:24Z","timestamp":1787636184000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":0,"title":["Streptomyces songxianensis sp. nov. SX92T: biocontrol of tobacco black shank and modulation of the rhizosphere microbiome"],"prefix":"10.3389","volume":"17","author":[{"given":"Mengyu","family":"Zhang","sequence":"first","affiliation":[{"name":"College of Agriculture, Henan University of Science and Technology","place":["Luoyang, Henan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lei","family":"He","sequence":"additional","affiliation":[{"name":"Henan Branch of China National Tobacco Corporation","place":["Zhengzhou, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chengjun","family":"Li","sequence":"additional","affiliation":[{"name":"Tobacco Research Institute, Henan Academy of Agricultural Sciences","place":["Xuchang, Henan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shuhe","family":"Wang","sequence":"additional","affiliation":[{"name":"College of Horticulture and Plant Conservation, Henan University of Science and Technology","place":["Luoyang, Henan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jianqiang","family":"Xu","sequence":"additional","affiliation":[{"name":"College of Horticulture and Plant Conservation, Henan University of Science and Technology","place":["Luoyang, Henan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zhengxiong","family":"Song","sequence":"additional","affiliation":[{"name":"Luoyang Branch of Henan Tobacco Company","place":["Luoyang, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yebin","family":"Kang","sequence":"additional","affiliation":[{"name":"College of Horticulture and Plant Conservation, Henan University of Science and Technology","place":["Luoyang, Henan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2026,8,25]]},"reference":[{"key":"ref1","doi-asserted-by":"publisher","first-page":"18","DOI":"10.1016\/j.tplants.2022.08.012","article-title":"Plant microbiota dysbiosis and the Anna Karenina principle","volume":"28","author":"Arnault","year":"2023","journal-title":"Trends Plant Sci."},{"key":"ref2","doi-asserted-by":"publisher","first-page":"W29","DOI":"10.1093\/nar\/gkab335","article-title":"antiSMASH 6.0: improving cluster detection and comparison capabilities","volume":"49","author":"Blin","year":"2021","journal-title":"Nucleic Acids Res."},{"key":"ref9001","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1146\/annurev-phyto-080615-100046","article-title":"Organic amendments, beneficial microbes, and soil microbiota: toward a unified framework for disease suppression","volume":"56","author":"Bonanomi","year":"2018","journal-title":"Annual Review of Phytopathology,"},{"key":"ref3","doi-asserted-by":"publisher","first-page":"216","DOI":"10.1016\/j.soilbio.2012.11.009","article-title":"Soil enzymes in a changing environment: current knowledge and future directions","volume":"58","author":"Burns","year":"2013","journal-title":"Soil Biol. 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