{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,26]],"date-time":"2026-08-26T17:25:32Z","timestamp":1787765132106,"version":"build-2784847793"},"reference-count":160,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2026,8,26]],"date-time":"2026-08-26T00:00:00Z","timestamp":1787702400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Microbiol."],"abstract":"<jats:p>The intricate relationship between soil microbiota and host plants plays a pivotal role in maintaining soil health and sustaining agricultural productivity. In this review, we examined current knowledge of these interactions, highlighting both their significance and the limitations in existing research. Although substantial progress has been made in elucidating the roles of diverse microbial communities in nutrient cycling, plant growth promotion, and disease suppression, several challenges remain. These include the complexity and diversity of microbial communities, as well as the dynamic nature of soil\u2013plant interactions under varying environmental conditions. Furthermore, there is a need for greater integration of interdisciplinary approaches, encompassing molecular biology, microbiology, ecology, and agronomy, to effectively address these challenges. In this context, this study proposes future research directions aimed at advancing our understanding of soil microbiota-plant interactions and their implications for sustainable agriculture. These include the development and application of advanced omics techniques, such as metagenomics and metatranscriptomics, to comprehensively characterize microbial communities and their functional attributes. Furthermore, harnessing the potential of microbial inoculants and biofertilizers tailored to specific crops, soils, and environmental conditions represents a promising strategy for improving soil health, enhancing nutrient use efficiency, and ensuring sustainable crop production. Overall, addressing these research gaps and leveraging emerging technologies will deepen our understanding of soil microbiota-plant interactions and facilitate the development of innovative, science-based strategies to promote resilient and sustainable agricultural systems.<\/jats:p>","DOI":"10.3389\/fmicb.2026.1841614","type":"journal-article","created":{"date-parts":[[2026,8,26]],"date-time":"2026-08-26T17:04:41Z","timestamp":1787763881000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":0,"title":["Unveiling diverse interactions between soil microbiota and host plants for sustainable agriculture: current limitations and prospects"],"prefix":"10.3389","volume":"17","author":[{"given":"Moazma","family":"Batool","sequence":"first","affiliation":[{"name":"Department of Botany, University of Agriculture","place":["Faisalabad, Pakistan"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sadam","family":"Hussain","sequence":"additional","affiliation":[{"name":"College of Agronomy, Henan Agricultural University","place":["Zhengzhou, China"]},{"name":"College of Grassland Agriculture, Northwest A&F University","place":["Yangling, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Abdul Ghaffar","family":"Shar","sequence":"additional","affiliation":[{"name":"Xi\u2019an Fanyi University","place":["Taiyigong, Shaanxi, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hafeez ur","family":"Rehman","sequence":"additional","affiliation":[{"name":"Department of Agronomy, University of Agriculture","place":["Faisalabad, Pakistan"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ejaz Ahmad","family":"Waraich","sequence":"additional","affiliation":[{"name":"Department of Agronomy, University of Agriculture","place":["Faisalabad, Pakistan"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Arslan","family":"Haidar","sequence":"additional","affiliation":[{"name":"Department of Botany, University of Agriculture","place":["Faisalabad, Pakistan"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Usman","family":"Zulfiqar","sequence":"additional","affiliation":[{"name":"Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur","place":["Bahawalpur, Pakistan"]},{"name":"Department of Biology, Nakhchivan State University","place":["Nakhchivan, Azerbaijan"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ruixin","family":"Shao","sequence":"additional","affiliation":[{"name":"Key Laboratory of High-Efficiency Production of Wheat-Maize Double Cropping\/College of Agronomy, Henan Agricultural University","place":["Zhengzhou, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jwaher Salem Khamis","family":"Alghafri","sequence":"additional","affiliation":[{"name":"Department of Biology, College of Science, United Arab Emirates University","place":["Al Ain, United Arab Emirates"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mayank Anand","family":"Gururani","sequence":"additional","affiliation":[{"name":"Department of Biology, College of Science, United Arab Emirates University","place":["Al Ain, United Arab Emirates"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2026,8,26]]},"reference":[{"key":"ref1","doi-asserted-by":"publisher","first-page":"847","DOI":"10.1016\/j.tibtech.2016.05.005","article-title":"Plant growth-promoting microorganisms for environmental sustainability","volume":"34","author":"Abhilash","year":"2016","journal-title":"Trends Biotechnol."},{"key":"ref2","doi-asserted-by":"publisher","first-page":"1475","DOI":"10.3390\/biology12121475","article-title":"Comprehensive analysis of WUSCEL-related homeobox gene family in ramie (Boehmeria nivea) indicates its potential role in adventitious root development","volume":"12","author":"Abubakar","year":"2023","journal-title":"Biology"},{"key":"ref3","doi-asserted-by":"publisher","first-page":"46","DOI":"10.1186\/s41938-022-00547-1","article-title":"Biocontrol mechanisms of endophytic fungi","volume":"32","author":"Adeleke","year":"2022","journal-title":"Egypt. J. Biol. Pest Control"},{"key":"ref4","doi-asserted-by":"publisher","first-page":"104717","DOI":"10.1016\/j.still.2020.104717","article-title":"Management impact and benefit of cover crops on soil quality: a review","volume":"204","author":"Adetunji","year":"2020","journal-title":"Soil Tillage Res."},{"key":"ref6","first-page":"303","volume-title":"Plant Pathology","year":"2005"},{"key":"ref9001","doi-asserted-by":"crossref","first-page":"1410","DOI":"10.1111\/ajae.12431","article-title":"Cover crops, crop insurance losses, and resilience to extreme weather events","volume":"106","author":"Aglasan","year":"2024","journal-title":"Am. J. Agric. Econ."},{"key":"ref7","doi-asserted-by":"publisher","first-page":"2992","DOI":"10.3389\/fmicb.2018.02992","article-title":"Perspectives of microbial inoculation for sustainable development and environmental management","volume":"9","author":"Ahmad","year":"2018","journal-title":"Front. Microbiol."},{"key":"ref8","doi-asserted-by":"publisher","first-page":"109516","DOI":"10.1016\/j.soilbio.2024.109516","article-title":"Root exudation and rhizosphere microbial assembly are influenced by novel plant trait diversity in carrot genotypes","volume":"197","author":"Anderson","year":"2024","journal-title":"Soil Biol. Biochem."},{"key":"ref9002","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1201\/9781003309581-4","article-title":"Plant defence regulation: role play of mycorrhizal fungi","volume-title":"Regenerative Agriculture","author":"Ansari","year":"2024"},{"key":"ref9","doi-asserted-by":"publisher","first-page":"642","DOI":"10.1016\/j.copbio.2009.09.014","article-title":"Rhizosphere chemical dialogues: plant\u2013microbe interactions","volume":"20","author":"Badri","year":"2009","journal-title":"Curr. Opin. Biotechnol."},{"key":"ref10","doi-asserted-by":"publisher","first-page":"90","DOI":"10.1016\/j.tplants.2013.11.006","article-title":"Root exudates: the hidden part of plant defense","volume":"19","author":"Baetz","year":"2014","journal-title":"Trends Plant Sci."},{"key":"ref9003","doi-asserted-by":"crossref","first-page":"e0154116","DOI":"10.1371\/journal.pone.0154116","article-title":"Friend or foe\u2014light availability determines the relationship between mycorrhizal fungi, rhizobia and lima bean (Phaseolus lunatus L.)","volume":"11","author":"Ballhorn","year":"2016","journal-title":"PLoS One"},{"key":"ref11","volume-title":"Pesticides in Soils: Occurrence, Fate, Control and Remediation","author":"Barra Caracciolo","year":"2021"},{"key":"ref12","doi-asserted-by":"publisher","first-page":"68","DOI":"10.1016\/j.micres.2015.11.012","article-title":"Multifunctionality and diversity of culturable bacterial communities strictly associated with spores of the plant beneficial symbiont Rhizophagus intraradices","volume":"183","author":"Battini","year":"2016","journal-title":"Microbiol. Res."},{"key":"ref13","doi-asserted-by":"publisher","first-page":"e2300361","DOI":"10.1002\/jobm.202300361","article-title":"Rhizosphere: role of bacteria to manage plant diseases and sustainable agriculture\u2014a review","volume":"64","author":"Benaissa","year":"2024","journal-title":"J. Basic Microbiol."},{"key":"ref14","doi-asserted-by":"publisher","first-page":"440","DOI":"10.1016\/j.tree.2016.02.016","article-title":"An underground revolution: biodiversity and soil ecological engineering for agricultural sustainability","volume":"31","author":"Bender","year":"2016","journal-title":"Trends Ecol. Evol."},{"key":"ref15","doi-asserted-by":"publisher","first-page":"379","DOI":"10.22438\/jeb\/39\/3\/mrn-523","article-title":"Study on the activity and diversity of bacteria in a new Gangetic alluvial soil (Eutrocrept) under rice-wheat-jute cropping system","volume":"39","author":"Biswas","year":"2018","journal-title":"J. Environ. Biol."},{"key":"ref16","doi-asserted-by":"publisher","first-page":"617","DOI":"10.1111\/j.1469-8137.2004.01066.x","article-title":"Protozoa and plant growth: the microbial loop in soil revisited","volume":"162","author":"Bonkowski","year":"2004","journal-title":"New Phytol."},{"key":"ref18","doi-asserted-by":"publisher","first-page":"2971","DOI":"10.1111\/gcb.12585","article-title":"Interactive biotic and abioticregulators of soil carbon cycling: evidence fromcontrolled climate experiments on peatland andboreal soils","volume":"20","author":"Briones","year":"2014","journal-title":"Glob. Chang. Biol."},{"key":"ref19","doi-asserted-by":"publisher","first-page":"95","DOI":"10.22034\/ijab.v7i2.582","article-title":"Effect of Chlorella vulgaris as a biofertilizer on germination of tomato and cucumber seeds","volume":"7","author":"Bumandalai","year":"2019","journal-title":"Int. J. Aquat. Biol."},{"key":"ref20","doi-asserted-by":"publisher","first-page":"166","DOI":"10.1080\/02757540.2023.2300780","article-title":"Ammonia, nitrite transformations and their fixation by different biological and chemical agents","volume":"40","author":"Chamoli","year":"2024","journal-title":"Chem. Ecol."},{"key":"ref21","doi-asserted-by":"publisher","first-page":"5","DOI":"10.1155\/2011\/150563","article-title":"Optical and digital microscopic imaging techniques and applications in pathology","volume":"34","author":"Chen","year":"2011","journal-title":"Anal. Cell. Pathol."},{"key":"ref22","doi-asserted-by":"publisher","first-page":"74","DOI":"10.1016\/j.cj.2026.01.002","article-title":"Biological nitrogen and carbon fixation: bridging the gap between synthetic symbioses and synthetic biology","volume":"14","author":"Cheng","year":"2026","journal-title":"Crop J."},{"key":"ref24","doi-asserted-by":"publisher","first-page":"197","DOI":"10.1111\/j.1574-6941.2010.00900.x","article-title":"Climate change effects on beneficial plant\u2013microorganism interactions","volume":"73","author":"Compant","year":"2010","journal-title":"FEMS Microbiol. Ecol."},{"key":"ref25","doi-asserted-by":"publisher","first-page":"10","DOI":"10.1094\/MPMI-07-14-0225-R","article-title":"Plant-influenced gene expression in the rice endophyte Burkholderia kururiensis M130","volume":"28","author":"Coutinho","year":"2015","journal-title":"Mol. Plant-Microbe Interact."},{"key":"ref26","doi-asserted-by":"publisher","first-page":"49","DOI":"10.30848\/PJB2020-1(7)","article-title":"Mitigation of drought stress in maize through inoculation with drought tolerant ACC deaminase containing PGPR under axenic conditions","volume":"52","author":"Danish","year":"2020","journal-title":"Pak. J. Bot."},{"key":"ref27","doi-asserted-by":"publisher","first-page":"113821","DOI":"10.1016\/j.envres.2022.113821","article-title":"Plant-soil-microbes: a tripartite interaction for nutrient acquisition and better plant growth for sustainable agricultural practices","volume":"214","author":"Das","year":"2022","journal-title":"Environ. Res."},{"key":"ref28","doi-asserted-by":"publisher","first-page":"85","DOI":"10.3390\/biology13020085","article-title":"Role of soil microbiota enzymes in soil health and activity changes depending on climate change and the type of soil ecosystem","volume":"13","author":"Daunoras","year":"2024","journal-title":"Biology"},{"key":"ref29","doi-asserted-by":"publisher","first-page":"104","DOI":"10.3389\/fmicb.2015.00104","article-title":"Long-term forest soilwarming alters microbial communities in temperate forest soils","volume":"6","author":"DeAngelis","year":"2015","journal-title":"Front. Microbiol."},{"key":"ref30","author":"Diver","year":"2000"},{"key":"ref31","doi-asserted-by":"publisher","first-page":"e00510","DOI":"10.1128\/iai.00510-24","article-title":"CRISPR-based genetic tools for the study of host-microbe interactions","volume":"93","author":"Echavarria Galindo","year":"2025","journal-title":"Infect. Immun."},{"key":"ref32","doi-asserted-by":"publisher","first-page":"2104","DOI":"10.3389\/fmicb.2017.02104","article-title":"Phytohormones and beneficial microbes: essential components for plants to balance stress and fitness","volume":"8","author":"Egamberdieva","year":"2017","journal-title":"Front. Microbiol."},{"key":"ref9004","doi-asserted-by":"crossref","first-page":"923880","DOI":"10.3389\/fpls.2022.923880","article-title":"Plant growth-promoting microorganisms as biocontrol agents of plant diseases: Mechanisms, challenges and future perspectives","volume":"13","author":"El-Saadony","year":"2022","journal-title":"Frontiers in plant science"},{"key":"ref33","doi-asserted-by":"publisher","first-page":"9","DOI":"10.1007\/s00253-018-9433-3","article-title":"The impact of microbes in the orchestration of plants' resistance to biotic stress: a disease management approach","volume":"103","author":"Enebe","year":"2019","journal-title":"Appl. Microbiol. Biotechnol."},{"key":"ref34","doi-asserted-by":"publisher","first-page":"398","DOI":"10.1039\/c7np00057j","article-title":"Modulation of plant chemistry by beneficial root microbiota","volume":"35","author":"Etalo","year":"2018","journal-title":"Nat. Prod. Rep."},{"key":"ref35","doi-asserted-by":"publisher","first-page":"102048","DOI":"10.1016\/j.pmpp.2023.102048","article-title":"Biocontrol of plant diseases by Bacillus spp","volume":"126","author":"Etesami","year":"2023","journal-title":"Physiol. Mol. Plant Pathol."},{"key":"ref36","volume-title":"State of Knowledge of Soil Biodiversity\u2013Status, Challenges and Potentialities. Summary for Policy Makers","year":"2020"},{"key":"ref37","doi-asserted-by":"crossref","first-page":"225","DOI":"10.1515\/9783110771558-010","volume-title":"Plant Protection: From Chemicals to Biologicals","author":"Fazeli-Nasab","year":"2022"},{"key":"ref38","doi-asserted-by":"publisher","first-page":"109289","DOI":"10.1016\/j.soilbio.2023.109289","article-title":"Plant-soil feedback across spatiotemporal scales from immediate effects to legacy","volume":"189","author":"Frouz","year":"2023","journal-title":"Soil Biol. Biochem."},{"key":"ref39","doi-asserted-by":"publisher","first-page":"39","DOI":"10.1016\/j.soilbio.2016.10.008","article-title":"Inducing the rhizosphere microbiome by biofertilizer application to suppress banana Fusarium wilt disease","volume":"104","author":"Fu","year":"2017","journal-title":"Soil Biol. Biochem."},{"key":"ref40","doi-asserted-by":"publisher","first-page":"1042","DOI":"10.3390\/s20041042","article-title":"IoT-based smart irrigation systems: an overview on the recent trends on sensors and IoT Systems for Irrigation in precision agriculture","volume":"20","author":"Garc\u00eda","year":"2020","journal-title":"Sensors"},{"key":"ref41","doi-asserted-by":"publisher","first-page":"e6","DOI":"10.1038\/jid.2013.1","article-title":"Research techniques made simple: polymerase chain reaction (PCR)","volume":"133","author":"Garibyan","year":"2013","journal-title":"J. Invest. Dermatol."},{"key":"ref42","doi-asserted-by":"publisher","first-page":"168","DOI":"10.3389\/fmicb.2019.00168","article-title":"Rapid transfer of plant photosynthates to soil bacteria via ectomycorrhizal hyphae and its interaction with nitrogen availability","volume":"10","author":"Gorka","year":"2019","journal-title":"Front. Microbiol."},{"key":"ref43","doi-asserted-by":"publisher","first-page":"465","DOI":"10.1038\/nature16942","article-title":"Plankton networks driving carbon export in the oligotrophic ocean","volume":"532","author":"Guidi","year":"2016","journal-title":"Nature"},{"key":"ref44","doi-asserted-by":"publisher","first-page":"165","DOI":"10.1007\/s12298-021-00927-1","article-title":"Plant-microbiome interactions for sustainable agriculture: a review","volume":"27","author":"Gupta","year":"2021","journal-title":"Physiol. Mol. Biol. Plants"},{"key":"ref45","doi-asserted-by":"publisher","first-page":"e20105","DOI":"10.1002\/agg2.20105","article-title":"Improving soil physical properties through the use of cover crops: a review","volume":"3","author":"Haruna","year":"2020","journal-title":"Agrosyst. Geosci. Environ."},{"key":"ref46","doi-asserted-by":"publisher","first-page":"255","DOI":"10.9734\/jeai\/2024\/v46i72580","article-title":"The future of biofertilizer use in safe agriculture","volume":"46","author":"Himabindu","year":"2024","journal-title":"J. Exp. Agric. Int."},{"key":"ref47","doi-asserted-by":"publisher","first-page":"7803","DOI":"10.1016\/j.catena.2024.107803","article-title":"Effects of different vegetation restoration types on soil microbial biomass carbon and water-soluble organic carbon of rhizosphere soil","volume":"2017","author":"Huang","year":"2017","journal-title":"J. Nanchang Inst. Technol."},{"key":"ref48","doi-asserted-by":"crossref","first-page":"293","DOI":"10.1007\/978-981-13-7553-8_15","volume-title":"Plant Growth Promoting Rhizobacteria for Agricultural Sustainability: From Theory to Practices","author":"\u0130pek","year":"2019"},{"key":"ref49","doi-asserted-by":"crossref","first-page":"699","DOI":"10.1007\/978-981-99-3439-3_25","volume-title":"One Health Implications of Agrochemicals and their Sustainable Alternatives","author":"Iyiola","year":"2023"},{"key":"ref50","doi-asserted-by":"publisher","first-page":"25","DOI":"10.3389\/fpls.2017.01617","article-title":"The role of soil microorganisms in plant mineral nutrition-current knowledge and future directions","volume":"8","author":"Jacoby","year":"2017","journal-title":"Front. Plant Sci."},{"key":"ref51","doi-asserted-by":"publisher","first-page":"140","DOI":"10.1016\/j.tibtech.2018.11.011","article-title":"The inherent conflicts in developing soil microbial inoculants","volume":"37","author":"Kaminsky","year":"2019","journal-title":"Trends Biotechnol."},{"key":"ref52","doi-asserted-by":"publisher","first-page":"77","DOI":"10.3390\/microorganisms5040077","article-title":"Bacterial endophyte colonization and distribution within plants","volume":"5","author":"Kandel","year":"2017","journal-title":"Microorganisms"},{"key":"ref53","doi-asserted-by":"publisher","first-page":"e09326","DOI":"10.1016\/j.heliyon.2022.e09326","article-title":"Microbial consortium with nitrogen fixing and mineral solubilizing attributes for growth of barley (Hordeum vulgare L.)","volume":"8","author":"Kaur","year":"2022","journal-title":"Heliyon"},{"key":"ref54","doi-asserted-by":"publisher","first-page":"1551","DOI":"10.3390\/cells10061551","article-title":"Insights into the interactions among roots, rhizosphere, and rhizobacteria for improving plant growth and tolerance to abiotic stresses: a review","volume":"10","author":"Khan","year":"2021","journal-title":"Cells"},{"key":"ref55","doi-asserted-by":"publisher","first-page":"1103","DOI":"10.1093\/treephys\/27.8.1103","article-title":"Variations in organic acid exudation and aluminum resistance among arbuscular Mycorrhizal species colonizing Liriodendron tulipifera","volume":"27","author":"Klugh","year":"2007","journal-title":"Tree Physiol."},{"key":"ref57","doi-asserted-by":"publisher","first-page":"138","DOI":"10.1038\/s41579-023-00975-2","article-title":"Algal blooms in the ocean: hot spots for chemically mediated microbial interactions","volume":"22","author":"Kuhlisch","year":"2024","journal-title":"Nat. Rev. Microbiol."},{"key":"ref58","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/s43621-024-00456-3","article-title":"Unraveling the role of antimicrobial peptides in plant resistance against phytopathogens","volume":"5","author":"Kumar","year":"2024","journal-title":"Discov. Sustain."},{"key":"ref59","first-page":"1326","article-title":"Precision agriculture: a review on its techniques and technologies","volume":"2","author":"Kumar","year":"2020","journal-title":"Int. Res. J. Mod. Eng. Technol. Sci"},{"key":"ref60","doi-asserted-by":"publisher","first-page":"1","DOI":"10.25165\/j.ijabe.20201301.5156","article-title":"Overview of the aeroponic agriculture\u2013an emerging technology for global food security","volume":"13","author":"Lakhiar","year":"2020","journal-title":"Int. J. Agric. Biol. Eng."},{"key":"ref61","doi-asserted-by":"publisher","first-page":"765","DOI":"10.3390\/agronomy9110765","article-title":"Species interactions improve above-ground biomass and land use efficiency in intercropped wheat and chickpea under low soil inputs","volume":"9","author":"Latati","year":"2019","journal-title":"Agronomy"},{"key":"ref62","doi-asserted-by":"publisher","first-page":"526","DOI":"10.1093\/jxb\/erad263","article-title":"Signal communication during microbial modulation of root system architecture","volume":"75","author":"Li","year":"2024","journal-title":"J. Exp. Bot."},{"key":"ref63","doi-asserted-by":"publisher","first-page":"622","DOI":"10.3390\/ijms19020622","article-title":"Belowground interactions impact the soil bacterial community, soil fertility, and crop yield in maize\/peanut intercropping systems","volume":"19","author":"Li","year":"2018","journal-title":"Int. J. Mol. Sci."},{"key":"ref64","doi-asserted-by":"publisher","first-page":"1485","DOI":"10.1007\/s11368-022-03381-y","article-title":"Transformation of soil organic matter subjected to environmental disturbance and preservation of organic matter bound to soil minerals: a review","volume":"23","author":"Li","year":"2023","journal-title":"J. Soils Sediments"},{"key":"ref65","doi-asserted-by":"publisher","first-page":"41","DOI":"10.1186\/s12870-016-0724-5","article-title":"Exogenous auxin regulates multi-metabolic network and embryo development, controlling seed secondary dormancy and germination in Nicotiana tabacum L","volume":"16","author":"Li","year":"2016","journal-title":"BMC Plant Biol."},{"key":"ref67","doi-asserted-by":"publisher","first-page":"1272","DOI":"10.1126\/science.aaf4507","article-title":"Decoupling function and taxonomy in the global ocean microbiome","volume":"353","author":"Louca","year":"2016","journal-title":"Science"},{"key":"ref68","doi-asserted-by":"publisher","first-page":"937940","DOI":"10.3389\/fmicb.2022.937940","article-title":"Root exudates contribute to belowground ecosystem hotspots: a review","volume":"13","author":"Ma","year":"2022","journal-title":"Front. Microbiol."},{"key":"ref69","doi-asserted-by":"publisher","first-page":"819","DOI":"10.1007\/s11816-021-00716-y","article-title":"Biotechnological application of plant growth-promoting endophytic bacteria isolated from halophytic plants to ameliorate salinity tolerance of Vicia faba L","volume":"15","author":"Mahgoub","year":"2021","journal-title":"Plant Biotechnol. Rep."},{"key":"ref70","doi-asserted-by":"publisher","first-page":"58","DOI":"10.1038\/nature09622","article-title":"Fungal lipochitooligosaccharide symbiotic signals in arbuscular mycorrhiza","volume":"469","author":"Maillet","year":"2011","journal-title":"Nature"},{"key":"ref9006","doi-asserted-by":"crossref","first-page":"97","DOI":"10.1007\/s13199-018-0539-2","article-title":"The plant growth promoting bacterium Azospirillum brasilense is vertically transmitted in Phaseolus vulgaris (common bean)","volume":"76","author":"Malinich","year":"2018","journal-title":"Symbiosis"},{"key":"ref71","doi-asserted-by":"crossref","first-page":"39","DOI":"10.1007\/978-3-319-53064-2_4","volume-title":"Mycorrhiza\u2013Function, Diversity, State of the Art","author":"Manchanda","year":"2017"},{"key":"ref72","doi-asserted-by":"publisher","first-page":"1098","DOI":"10.3390\/plants10061098","article-title":"Fight hard or die trying: current status of lipid signaling during plant\u2013pathogen interaction","volume":"10","author":"Mehta","year":"2021","journal-title":"Plants"},{"key":"ref73","doi-asserted-by":"publisher","first-page":"2598","DOI":"10.1111\/1365-2745.13199","article-title":"Patterns of nitrogen-fixing tree abundance in forests across Asia and America","volume":"107","author":"Menge","year":"2019","journal-title":"J. Ecol."},{"key":"ref74","doi-asserted-by":"publisher","first-page":"127","DOI":"10.1080\/07352689.2021.1901044","article-title":"An ecological insight into the multifaceted world of plant-endophyte association","volume":"40","author":"Mishra","year":"2021","journal-title":"Crit. Rev. Plant Sci."},{"key":"ref75","doi-asserted-by":"publisher","first-page":"137","DOI":"10.5958\/2320-642x.2016.00015.6","article-title":"Role of beneficial soil microbes in sustainable agriculture and environmental management","volume":"4","author":"Mishra","year":"2016","journal-title":"Clim. Change Environ. Sustain."},{"key":"ref76","doi-asserted-by":"publisher","first-page":"1276","DOI":"10.3390\/microorganisms12071276","article-title":"Impact of plant\u2013microbe interactions with a focus on poorly investigated urban ecosystems\u2014a review","volume":"12","author":"Monaco","year":"2024","journal-title":"Microorganisms"},{"key":"ref77","doi-asserted-by":"publisher","first-page":"17","DOI":"10.55544\/jrasb.3.1.4","article-title":"Nitrogen cycling dynamics: investigating volatilization and its interplay with N2 fixation","volume":"3","author":"Monib","year":"2024","journal-title":"J. Res. Appl. Sci. Biotechnol."},{"key":"ref78","doi-asserted-by":"publisher","first-page":"106","DOI":"10.3389\/fsufs.2020.00106","article-title":"The roles of plant growth promoting microbes in enhancing plant tolerance to acidity and alkalinity stresses","volume":"4","author":"Msimbira","year":"2020","journal-title":"Front. Sustain. Food Syst."},{"key":"ref79","doi-asserted-by":"crossref","first-page":"103","DOI":"10.1016\/B978-0-323-96113-4.00003-2","volume-title":"Metagenomics to Bioremediation","author":"Mukherjee","year":"2023"},{"key":"ref80","doi-asserted-by":"publisher","first-page":"602","DOI":"10.55730\/1300-011X.3113","article-title":"Organic amendments: a natural way to suppress phytopathogens: a sustainable approach to go green","volume":"47","author":"Naghman","year":"2023","journal-title":"Turk. J. Agric. For."},{"key":"ref81","doi-asserted-by":"publisher","first-page":"102393","DOI":"10.1016\/j.pmpp.2024.102393","article-title":"Microbial consortia mediated regulation of plant defense: a promising tool for sustaining crops protection","volume":"134","author":"Negi","year":"2024","journal-title":"Physiol. Mol. Plant Pathol."},{"key":"ref82","doi-asserted-by":"publisher","first-page":"80","DOI":"10.3390\/insects9030080","article-title":"Asymptomatic host plant infection by the widespread pathogen Botrytis cinerea alters the life histories, behaviors, and interactions of an aphid and its natural enemies","volume":"9","author":"Ngah","year":"2018","journal-title":"Insects"},{"key":"ref83","doi-asserted-by":"publisher","first-page":"100372","DOI":"10.1016\/j.rhisph.2021.100372","article-title":"The contributions of biotic lines of defence to improving plant disease suppression in soils: a review","volume":"19","author":"Nwokolo","year":"2021","journal-title":"Rhizosphere"},{"key":"ref84","doi-asserted-by":"publisher","first-page":"1340","DOI":"10.1111\/sum.12811","article-title":"Soil microbial inoculants for sustainable agriculture: limitations and opportunities","volume":"38","author":"O\u2019Callaghan","year":"2022","journal-title":"Soil Use Manag."},{"key":"ref85","doi-asserted-by":"publisher","first-page":"658679","DOI":"10.3389\/fpls.2021.658679","article-title":"NO network for plant\u2013microbe communication underground: a review","volume":"12","author":"Pande","year":"2021","journal-title":"Front. Plant Sci."},{"key":"ref86","first-page":"18","article-title":"Role of nutrients in wheat: a review","author":"Pandey","year":"2020"},{"key":"ref9005","doi-asserted-by":"crossref","first-page":"29","DOI":"10.1111\/nph.18933","article-title":"The good, the bad, and the phosphate: regulation of beneficial and detrimental plant\u2013microbe interactions by the plant phosphate status","volume":"239","author":"Paries","year":"2023","journal-title":"New Phytologist"},{"key":"ref87","doi-asserted-by":"publisher","first-page":"600","DOI":"10.1111\/j.1469-8137.2006.01931.x","article-title":"Rhizodeposition shapes rhizosphere microbial community structure in organic soil","volume":"173","author":"Paterson","year":"2007","journal-title":"New Phytol."},{"key":"ref88","doi-asserted-by":"publisher","first-page":"14","DOI":"10.1002\/ldr.2262","article-title":"Biological indices for soil quality evaluation: perspectives and limitations","volume":"27","author":"Paz","year":"2016","journal-title":"Land Degrad. Dev."},{"key":"ref89","doi-asserted-by":"publisher","first-page":"3457806","DOI":"10.1155\/2022\/3457806","article-title":"[Retracted] a comprehensive review of performance of next-generation sequencing platforms","volume":"2022","author":"Pervez","year":"2022","journal-title":"Biomed. Res. Int."},{"key":"ref90","doi-asserted-by":"publisher","first-page":"226","DOI":"10.1038\/s41579-023-00980-5","article-title":"The interplay between microbial communities and soil properties","volume":"22","author":"Philippot","year":"2024","journal-title":"Nat. Rev. Microbiol."},{"key":"ref91","doi-asserted-by":"crossref","DOI":"10.1201\/9781003106784","volume-title":"Plant-Microbe Dynamics: Recent Advances for Sustainable Agriculture","author":"Pirzadah","year":"2021"},{"key":"ref92","first-page":"887","article-title":"Endophytic fungi as resource of bioactive compounds","volume":"6","author":"Prakash","year":"2015","journal-title":"Int J Pharm. Bio. Sci"},{"key":"ref93","doi-asserted-by":"publisher","first-page":"1","DOI":"10.23880\/jenr-16000231","article-title":"Arbuscular mycorrhizal fungi and plant collaborations influences ecology and environmental changes for global sustainable development","volume":"5","author":"Prasad","year":"2021","journal-title":"J. Ecol. Nat. Resour."},{"key":"ref94","doi-asserted-by":"publisher","first-page":"109231","DOI":"10.1016\/j.soilbio.2023.109231","article-title":"Core species impact plant health by enhancing soil microbial cooperation and network complexity during community coalescence","volume":"188","author":"Qiao","year":"2024","journal-title":"Soil Biol. Biochem."},{"key":"ref95","doi-asserted-by":"publisher","first-page":"107371","DOI":"10.1016\/j.biotechadv.2019.03.010","article-title":"New frontiers in agriculture productivity: optimised microbial inoculants and in situ microbiome engineering","volume":"37","author":"Qiu","year":"2019","journal-title":"Biotechnol. Adv."},{"key":"ref97","first-page":"37","volume-title":"Promotion of Improved Cultivation Practices in Agri and Allied Sector for Food and Nutritional Security","author":"Rajesha","year":"2020"},{"key":"ref98","first-page":"299","volume-title":"New and Future Developments in Microbial Biotechnology and Bioengineering: Trends of Microbial Biotechnology for Sustainable Agriculture and Biomedicine Systems: Diversity and Functional Perspectives","author":"Rastegari","year":"2020"},{"key":"ref99","doi-asserted-by":"publisher","first-page":"2088","DOI":"10.9734\/ijecc\/2023\/v13i102870","article-title":"Soil health and sustainability in the age of organic amendments: a review","volume":"13","author":"Rastogi","year":"2023","journal-title":"Int. J. Environ. Climate Chang."},{"key":"ref100","doi-asserted-by":"publisher","first-page":"1325","DOI":"10.7759\/cureus.1325","article-title":"Application of fluorescence in situ hybridization (FISH) technique for the detection of genetic aberration in medical science","volume":"9","author":"Ratan","year":"2017","journal-title":"Cureus"},{"key":"ref101","doi-asserted-by":"publisher","first-page":"118529","DOI":"10.1016\/j.jenvman.2023.118529","article-title":"Unrevealing the potential of microbes in decomposition of organic matter and release of carbon in the ecosystem","volume":"344","author":"Raza","year":"2023","journal-title":"J. Environ. Manag."},{"key":"ref102","doi-asserted-by":"publisher","first-page":"151588","DOI":"10.1016\/j.scitotenv.2021.151588","article-title":"Sustainable biochar-based soil fertilizers and amendments as a new trend in biochar research","volume":"816","author":"Rombel","year":"2022","journal-title":"Sci. Total Environ."},{"key":"ref103","doi-asserted-by":"publisher","first-page":"193","DOI":"10.1093\/plcell\/koab222","article-title":"Cycling in a crowd: coordination of plant cell division, growth, and cell fate","volume":"34","author":"Sablowski","year":"2022","journal-title":"Plant Cell"},{"key":"ref104","doi-asserted-by":"publisher","first-page":"1508","DOI":"10.1111\/tpj.16871","article-title":"Two members of a nodule-specific cysteine-rich (NCR) peptide gene cluster are required for differentiation of rhizobia in Medicago truncatula nodules","volume":"119","author":"Saifi","year":"2024","journal-title":"Plant J."},{"key":"ref105","doi-asserted-by":"publisher","first-page":"145","DOI":"10.1146\/annurev-ecolsys-110617-062605","article-title":"More than the sum of its parts: microbiome biodiversity as a driver of plant growth and soil health","volume":"50","author":"Saleem","year":"2019","journal-title":"Annu. Rev. Ecol. Evol. Syst."},{"key":"ref106","doi-asserted-by":"publisher","first-page":"167","DOI":"10.1007\/s00572-013-0479-x","article-title":"The role of arbuscular mycorrhizas in decreasing aluminium phytotoxicity in acidic soils: a review","volume":"23","author":"Seguel","year":"2013","journal-title":"Mycorrhiza"},{"key":"ref107","doi-asserted-by":"publisher","first-page":"109","DOI":"10.15547\/ast.2021.02.019","article-title":"Role of soil microbes in sustainable crop production and soil health: a review","volume":"13","author":"Shah","year":"2021","journal-title":"Agric. Sci. Technol."},{"key":"ref108","first-page":"11","article-title":"Bacillus subtilis and phosphobacteria effects on soil and fruit quality in kiwifruit orchards","volume":"1","author":"Shao","year":"2016","journal-title":"Agric. Res. Arid Areas."},{"key":"ref109","doi-asserted-by":"publisher","first-page":"250","DOI":"10.1007\/s43621-024-00447-4","article-title":"Sustainable farming practices and soil health: a pathway to achieving SDGs and future prospects","volume":"5","author":"Sharma","year":"2024","journal-title":"Discov. Sustain."},{"key":"ref110","doi-asserted-by":"publisher","first-page":"1935","DOI":"10.4236\/ajps.2018.99140","article-title":"The role of cover crops towards sustainable soil health and agriculture \u2013 a review paper","volume":"9","author":"Sharma","year":"2018","journal-title":"Am. J. Plant Sci."},{"key":"ref111","doi-asserted-by":"publisher","first-page":"105003","DOI":"10.1016\/j.apsoil.2023.105003","article-title":"Bacteria are more sensitive than fungi to soil fertility in an intensive vegetable field","volume":"190","author":"Shen","year":"2023","journal-title":"Appl. Soil Ecol."},{"key":"ref112","doi-asserted-by":"publisher","first-page":"449","DOI":"10.3390\/su16010449","article-title":"Biosurfactants: promising biomolecules for agricultural applications","volume":"16","author":"Silva","year":"2024","journal-title":"Sustainability"},{"key":"ref113","doi-asserted-by":"publisher","first-page":"640","DOI":"10.1038\/s41579-023-00900-7","article-title":"Climate change impacts on plant pathogens, food security and paths forward","volume":"21","author":"Singh","year":"2023","journal-title":"Nat. Rev. Microbiol."},{"key":"ref114","first-page":"1","volume-title":"New and Future Developments in Microbial Biotechnology and Bioengineering","author":"Singh","year":"2020"},{"key":"ref115","first-page":"199","volume-title":"Bio-Intensive Approaches: Application and Effectiveness in Plant Diseases Management","author":"Singh","year":"2019"},{"key":"ref117","doi-asserted-by":"publisher","first-page":"154989","DOI":"10.1016\/j.cej.2024.154989","article-title":"Challenges in current pest management practices: navigating problems and a way forward by integrating controlled release system approach","volume":"498","author":"Singh","year":"2024","journal-title":"Chem. Eng. J."},{"key":"ref118","doi-asserted-by":"publisher","first-page":"3105","DOI":"10.1007\/s00344-023-11060-6","article-title":"Microbial volatiles (mVOCs) induce tomato plant growth and disease resistance against wilt pathogen Fusarium oxysporum f. sp. lycopersici","volume":"43","author":"Singh","year":"2024","journal-title":"J. Plant Growth Regul."},{"key":"ref119","first-page":"1","volume-title":"Nucleic Acids-From Basic Aspects to Laboratory Tools","author":"Sirakov","year":"2016"},{"key":"ref120","doi-asserted-by":"publisher","first-page":"35","DOI":"10.1016\/bs.agron.2023.03.001","article-title":"Microbial inoculant carriers: soil health improvement and moisture retention in sustainable agriculture","volume":"180","author":"Sivaram","year":"2023","journal-title":"Adv. Agron."},{"key":"ref121","doi-asserted-by":"publisher","first-page":"2626","DOI":"10.1002\/ecy.1954","article-title":"The importance of species identity and interactions for multifunctionality depends on how ecosystem functions are valued","volume":"98","author":"Slade","year":"2017","journal-title":"Ecology"},{"key":"ref9021","article-title":"Mycorrhizal symbiosis","author":"Smith","year":"2008"},{"key":"ref122","doi-asserted-by":"publisher","first-page":"415","DOI":"10.1038\/s41579-022-00695-z","article-title":"Life and death in the soil microbiome: how ecological processes influence biogeochemistry","volume":"20","author":"Sokol","year":"2022","journal-title":"Nat. Rev. Microbiol."},{"key":"ref123","doi-asserted-by":"publisher","first-page":"20697","DOI":"10.1038\/s41598-023-48195-1","article-title":"Combined application of microbial inoculant and kelp-soaking wastewater promotes wheat seedlings growth and improves structural diversity of rhizosphere microbial community","volume":"13","author":"Song","year":"2023","journal-title":"Sci. Rep."},{"key":"ref125","doi-asserted-by":"publisher","first-page":"68","DOI":"10.1016\/j.tim.2023.06.006","article-title":"Microbial regulation of feedbacks to ecosystem change","volume":"32","author":"Sveen","year":"2024","journal-title":"Trends Microbiol."},{"key":"ref126","doi-asserted-by":"publisher","first-page":"4859","DOI":"10.3390\/su12124859","article-title":"Soil health and sustainable agriculture","volume":"12","author":"Tahat","year":"2020","journal-title":"Sustainability"},{"key":"ref9007","article-title":"A survey on techniques and technology used in hydroponics system","volume":"3628","author":"Tambakhe","year":"2020","journal-title":"EasyChair Preprint"},{"key":"ref127","doi-asserted-by":"publisher","first-page":"109222","DOI":"10.1016\/j.soilbio.2023.109222","article-title":"Evaluation of the relation between soil biomass of arbuscular mycorrhizal fungi and glomalin-related soil protein in conservation agriculture","volume":"187","author":"Thomopoulos","year":"2023","journal-title":"Soil Biol. Biochem."},{"key":"ref128","doi-asserted-by":"publisher","first-page":"2167","DOI":"10.1093\/jxb\/erv157","article-title":"Role of root microbiota in plant productivity","volume":"66","author":"Tkacz","year":"2015","journal-title":"J. Exp. Bot."},{"key":"ref129","doi-asserted-by":"publisher","first-page":"91","DOI":"10.46718\/JBGSR.2020.04.000091","article-title":"Role of soil microbes in agriculture; a review","volume":"2020","author":"Toor","year":"2020","journal-title":"Open Access J. Biogeneric Res."},{"key":"ref130","doi-asserted-by":"crossref","first-page":"185","DOI":"10.1016\/B978-0-12-812160-3.00006-4","volume-title":"Biotechnology for Sustainable Agriculture","author":"Umesha","year":"2018"},{"key":"ref131","year":"2019"},{"key":"ref132","doi-asserted-by":"publisher","first-page":"142934","DOI":"10.1016\/j.scitotenv.2020.142934","article-title":"Petroleum sludge polluted soil remediation: integrated approach involving novel bacterial consortium and nutrient application","volume":"763","author":"Varjani","year":"2021","journal-title":"Sci. Total Environ."},{"key":"ref133","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1007\/978-981-15-4752-2_1","volume-title":"The Plant Family Fabaceae","author":"Vasconcelos","year":"2020"},{"key":"ref134","doi-asserted-by":"publisher","first-page":"218","DOI":"10.1016\/j.tplants.2016.01.013","article-title":"Beneficial microbes affect endogenous mechanisms controlling root development","volume":"21","author":"Verbon","year":"2016","journal-title":"Trends Plant Sci."},{"key":"ref135","doi-asserted-by":"publisher","first-page":"263","DOI":"10.1007\/s00374-024-01802-3","article-title":"How to adequately represent biological processes in modeling multifunctionality of arable soils","volume":"60","author":"Vogel","year":"2024","journal-title":"Biol. Fertil. Soils"},{"key":"ref136","doi-asserted-by":"publisher","first-page":"48","DOI":"10.1007\/s13593-016-0385-7","article-title":"Cover crops to increase soil microbial diversity and mitigate decline in perennial agriculture. A review","volume":"36","author":"Vukicevich","year":"2016","journal-title":"Agron. Sustain. Dev."},{"key":"ref137","doi-asserted-by":"publisher","first-page":"561","DOI":"10.1016\/j.jhazmat.2017.08.062","article-title":"Synergistic degradation of pyrene by five culturable bacteria in a mangrove sediment-derived bacterial consortium","volume":"342","author":"Wanapaisan","year":"2018","journal-title":"J. Hazard. Mater."},{"key":"ref138","doi-asserted-by":"publisher","first-page":"466","DOI":"10.3390\/biom16030466","article-title":"Dynamic coordination: how ERF transcription factors coordinate plant development and adaptive stress responses","volume":"16","author":"Wang","year":"2026","journal-title":"Biomolecules"},{"key":"ref139","doi-asserted-by":"publisher","first-page":"167409","DOI":"10.1016\/j.scitotenv.2023.167409","article-title":"The mechanism of microbial community succession and microbial co-occurrence network in soil with compost application","volume":"906","author":"Wang","year":"2024","journal-title":"Sci. Total Environ."},{"key":"ref140","volume-title":"The Ecology of Cyanobacteria: Their Diversity in Time and Space","author":"Whitton","year":"2007"},{"key":"ref141","doi-asserted-by":"publisher","first-page":"428","DOI":"10.1111\/j.1751-7915.2009.00109.x","article-title":"Developing microbe\u2013plant interactions for applications in plant-growth promotion and disease control, production of useful compounds, remediation and carbon sequestration","volume":"2","author":"Wu","year":"2009","journal-title":"Microb. Biotechnol."},{"key":"ref142","doi-asserted-by":"publisher","first-page":"51","DOI":"10.1186\/s12866-018-1174-z","article-title":"Environmental factors shaping the diversity of bacterial communities that promote rice production","volume":"18","author":"Wu","year":"2018","journal-title":"BMC Microbiol."},{"key":"ref143","doi-asserted-by":"publisher","first-page":"15","DOI":"10.5376\/lgg.2024.15.0015","article-title":"The role of Rhizobium in legume crop enhancement: genetic insights and practical applications","volume":"15","author":"Wu","year":"2024","journal-title":"Legume Genomics Genet."},{"key":"ref144","doi-asserted-by":"publisher","first-page":"198","DOI":"10.1016\/j.soilbio.2017.01.010","article-title":"Distinct roles for soil fungal and bacterial communities associated with the suppression of vanilla Fusarium wilt disease","volume":"107","author":"Xiong","year":"2017","journal-title":"Soil Biol. Biochem."},{"key":"ref145","doi-asserted-by":"publisher","first-page":"2491","DOI":"10.1093\/jxb\/erm096","article-title":"Functional characterization of LePT4: a phosphate transporter in tomato with mycorrhiza-enhanced expression","volume":"58","author":"Xu","year":"2007","journal-title":"J. Exp. Bot."},{"key":"ref146","doi-asserted-by":"publisher","first-page":"4894","DOI":"10.1038\/s41467-018-07343-2","article-title":"The structure and function of the global citrus rhizosphere microbiome","volume":"9","author":"Xu","year":"2018","journal-title":"Nat. Commun."},{"key":"ref147","doi-asserted-by":"publisher","first-page":"224","DOI":"10.37855\/jah.2023.v25i03.40","article-title":"Biological management of cumin Fusarium wilt caused by Fusarium oxysporum f. sp. cumini using antagonistic rhizospheric bacteria Bacillus licheniformis","volume":"25","author":"Yadav","year":"2023","journal-title":"J. Appl. Hortic."},{"key":"ref148","doi-asserted-by":"publisher","first-page":"170979","DOI":"10.1016\/j.scitotenv.2024.170979","article-title":"Long-term organic amendments increase the vulnerability of microbial respiration to environmental changes: evidence from field and laboratory studies","volume":"920","author":"Ye","year":"2024","journal-title":"Sci. Total Environ."},{"key":"ref149","doi-asserted-by":"publisher","first-page":"30","DOI":"10.1007\/s42773-025-00540-5","article-title":"Phosphorus-modified biochar from Salvia miltiorrhiza dregs: synthesis, characterization, and dual-functional synergy for heavy metal immobilization and soil fertility augmentation","volume":"8","author":"Yuan","year":"2026","journal-title":"Biochar"},{"key":"ref150","doi-asserted-by":"publisher","first-page":"466","DOI":"10.1016\/j.sajb.2009.03.003","article-title":"Differential response of growth, photosynthesis, antioxidant enzymes and lipid peroxidation to UV-B radiation in three cyanobacteria","volume":"75","author":"Zeeshan","year":"2009","journal-title":"S. Afr. J. Bot."},{"key":"ref151","doi-asserted-by":"publisher","first-page":"182","DOI":"10.1093\/femsre\/fuv045","article-title":"Friends or foes? Emerging insights from fungal interactions with plants","volume":"40","author":"Zeilinger","year":"2016","journal-title":"FEMS Microbiol. Rev."},{"key":"ref152","doi-asserted-by":"publisher","first-page":"169670","DOI":"10.1016\/j.scitotenv.2023.169670","article-title":"Illuminated fulvic acid stimulates denitrification and as (III) immobilization in flooded paddy soils via an enhanced biophotoelectrochemical pathway","volume":"912","author":"Zeng","year":"2024","journal-title":"Sci. Total Environ."},{"key":"ref153","author":"Zhang","year":"2019"},{"key":"ref154","doi-asserted-by":"publisher","first-page":"177","DOI":"10.1016\/j.soilbio.2014.03.004","article-title":"Hyphosphere interactions between an arbuscular mycorrhizal fungus and a phosphate solubilizing bacterium promote phytate mineralization in soil","volume":"74","author":"Zhang","year":"2014","journal-title":"Soil Biol. Biochem."},{"key":"ref155","doi-asserted-by":"publisher","first-page":"116678","DOI":"10.1016\/j.geoderma.2023.116678","article-title":"Responses of soil nitrogen cycling to changes in aboveground plant litter inputs: a meta-analysis","volume":"439","author":"Zhang","year":"2023","journal-title":"Geoderma"},{"key":"ref156","doi-asserted-by":"publisher","first-page":"4837","DOI":"10.1038\/s41598-017-05260-w","article-title":"Soil bacterial quantification approaches coupling with relative abundances reflecting the changes of taxa","volume":"7","author":"Zhang","year":"2017","journal-title":"Sci. Rep."},{"key":"ref157","doi-asserted-by":"publisher","first-page":"1022","DOI":"10.1111\/nph.13838","article-title":"Carbon and phosphorus exchange may enable cooperation between an arbuscular mycorrhizal fungus and a phosphate-solubilizing bacterium","volume":"210","author":"Zhang","year":"2016","journal-title":"New Phytol."},{"key":"ref158","doi-asserted-by":"publisher","first-page":"e70147","DOI":"10.1111\/ejss.70147","article-title":"Response of soil organic carbon and bacterial community to amendments in saline-alkali soils of the Yellow River Delta","volume":"76","author":"Zhao","year":"2025","journal-title":"Eur. J. Soil Sci."},{"key":"ref9008","doi-asserted-by":"crossref","first-page":"120915","DOI":"10.1007\/s11356-023-30887-w","article-title":"Synthesis and application of a compound microbial inoculant for effective soil remediation","volume":"30","author":"Zhao","year":"2023","journal-title":"Environ. Sci. Pollut. Res."},{"key":"ref159","doi-asserted-by":"publisher","first-page":"105263","DOI":"10.1016\/j.apsoil.2023.105263","article-title":"Organic fertilizer compost alters the microbial composition and network structure in strongly acidic soil","volume":"195","author":"Zhou","year":"2024","journal-title":"Appl. Soil Ecol."}],"container-title":["Frontiers in Microbiology"],"original-title":[],"link":[{"URL":"https:\/\/www.frontiersin.org\/articles\/10.3389\/fmicb.2026.1841614\/full","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,8,26]],"date-time":"2026-08-26T17:04:47Z","timestamp":1787763887000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.frontiersin.org\/articles\/10.3389\/fmicb.2026.1841614\/full"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,8,26]]},"references-count":160,"alternative-id":["10.3389\/fmicb.2026.1841614"],"URL":"https:\/\/doi.org\/10.3389\/fmicb.2026.1841614","relation":{},"ISSN":["1664-302X"],"issn-type":[{"value":"1664-302X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,8,26]]},"article-number":"1841614"}}