{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,22]],"date-time":"2026-09-22T06:04:38Z","timestamp":1790057078192,"version":"4.0.1"},"reference-count":62,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2026,9,22]],"date-time":"2026-09-22T00:00:00Z","timestamp":1790035200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Microbiol."],"abstract":"<jats:p>\n                    Agricultural straw is an abundant yet underutilised lignocellulosic resource whose microbial valorisation requires cellulolytic strains that sustain enzyme production under substrate-imposed stress. Although\n                    <jats:italic>Bacillus siamensis<\/jats:italic>\n                    is valued for plant growth promotion and biocontrol, its lignocellulose-degrading capacity and regulation remain largely unexplored.\n                    <jats:italic>B. siamensis<\/jats:italic>\n                    LSZ23, isolated from humic soil in Inner Mongolia, China, produced a balanced cellulolytic system (CMCase 0.321, \u03b2-glucosidase 0.275, avicelase 0.240 and FPase 0.209 U\/mL in 24 h LB culture) and reduced sterilised corn straw dry mass by 19.5% within 20 d in solid-state culture (10\n                    <jats:sup>9<\/jats:sup>\n                    CFU\/g), with scanning electron microscopy revealing extensive fibre-bundle disruption. Its 4.12 Mb genome (46% GC, 4,120 protein-coding genes) encodes 570 predicted carbohydrate-active enzyme (CAZyme) genes, with marked expansion of glycoside hydrolase family GH1, and harbours 31 orthogroups absent from four reference genomes, notably oligosaccharide ATP-binding cassette transporters and starch-processing enzymes. Upon straw exposure, transcriptomics (173 differentially expressed genes) and metabolomics (1,094 differentially abundant metabolites) indicated coordinated reprogramming rather than simple enzyme amplification: motility and chemotaxis genes were repressed, the biofilm-matrix gene\n                    <jats:italic>tapA<\/jats:italic>\n                    was induced, carbon uptake shifted transcriptionally towards a phosphotransferase system-mediated cellobiose route, and the glutamine synthetase-glutamate synthase pathway and\n                    <jats:italic>de novo<\/jats:italic>\n                    purine biosynthesis were downregulated, consistent with reduced high-cost anabolism. Purine metabolism was jointly significant across both omics. Lignin-derived phenolics accumulated alongside five upregulated MarR-family transcriptional regulators, although their ligand-regulon relationships remain undetermined. These findings provide a multiomics framework for LSZ23-mediated lignocellulose bioconversion and identify it as a candidate hydrolytic partner for straw degrading consortia.\n                  <\/jats:p>","DOI":"10.3389\/fmicb.2026.1935834","type":"journal-article","created":{"date-parts":[[2026,9,22]],"date-time":"2026-09-22T05:39:37Z","timestamp":1790055577000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":0,"title":["Multiomics profiling of transcriptional and metabolic responses of Bacillus siamensis LSZ23 to corn straw"],"prefix":"10.3389","volume":"17","author":[{"given":"Wei","family":"Zhang","sequence":"first","affiliation":[{"name":"School of Life Sciences, Inner Mongolia University","place":["Hohhot, China"]},{"name":"Key Laboratory of Black Soil Protection and Utilisation (Hohhot), Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Ministry of Agriculture and Rural Affairs","place":["Hohhot, 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