{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,25]],"date-time":"2026-04-25T16:10:31Z","timestamp":1777133431261,"version":"3.51.4"},"reference-count":76,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2023,7,10]],"date-time":"2023-07-10T00:00:00Z","timestamp":1688947200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001407","name":"Department of Biotechnology, Ministry of Science and Technology, India","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001407","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Plant Sci."],"abstract":"<jats:p>Despite Northeastern India being \u201cTreasure House of Citrus Genetic Wealth,\u201d genetic erosion of citrus diversity poses severe concern with a corresponding loss in seed microbial diversity. The seed microbiome of citrus species unique to the Purvanchal Himalaya is seldom explored for their use in sustainable orchard management. Isolation and characterization of culturable seed microbiomes of eight citrus species, namely,<jats:italic>Citrus reticulata<\/jats:italic>Blanco,<jats:italic>C. grandis<\/jats:italic>(L.) Osbeck,<jats:italic>C. latipes<\/jats:italic>Tanaka,<jats:italic>C. megaloxycarpa<\/jats:italic>Lushaigton,<jats:italic>C. jambhiri<\/jats:italic>Lush,<jats:italic>C. sinensis<\/jats:italic>(L.) Osbeck,<jats:italic>C. macroptera<\/jats:italic>Montr, and<jats:italic>C. indica<\/jats:italic>Tanaka collected from NE India were carried out. The isolates were then screened for an array of plant growth\u2013promoting (PGP) traits [indole acetic acid (IAA) production, N<jats:sub>2<\/jats:sub>fixation, phosphate and zinc complex dissolution, siderophores, and Hydrogen Cyanide (HCN) production]. The pure culture isolates of seed microbiomes were capable of dissolving insoluble Ca<jats:sub>3<\/jats:sub>(PO<jats:sub>4<\/jats:sub>)<jats:sub>2<\/jats:sub>(1.31\u20134.84 \u00b5g Pi ml<jats:sup>-1<\/jats:sup>h<jats:sup>-1<\/jats:sup>), Zn<jats:sub>3<\/jats:sub>(PO<jats:sub>4<\/jats:sub>)<jats:sub>2<\/jats:sub>(2.44\u20133.16 \u00b5g Pi ml<jats:sup>-1<\/jats:sup>h<jats:sup>-1<\/jats:sup>), AlPO<jats:sub>4<\/jats:sub>(1.74\u20133.61 \u00b5g Pi ml<jats:sup>-1<\/jats:sup>h<jats:sup>-1<\/jats:sup>), and FePO<jats:sub>4<\/jats:sub>(1.54\u20134.61\u00b5g Pi ml<jats:sup>-1<\/jats:sup>h<jats:sup>-1<\/jats:sup>), mineralized phytate (12.17\u201318.00 \u00b5g Pi ml<jats:sup>-1<\/jats:sup>h<jats:sup>-1<\/jats:sup>) and produced IAA-like substances (4.8\u2013187.29 \u00b5g ml<jats:sup>-1<\/jats:sup>h<jats:sup>-1<\/jats:sup>). A few isolates of the seed microbiome were also able to fix nitrogen, secrete siderophore-like compounds and HCN, and dissolve ZnSO<jats:sub>4<\/jats:sub>and ZnO. The 16S ribosomal Ribonucleic Acid (rRNA)\u2013based taxonomic findings revealed that<jats:italic>Bacillus<\/jats:italic>was the most dominant genus among the isolates across citrus species. Isolates CG2-1, CME6-1, CME6-4, CME6-5, CME6-9, CJ7-1, CMA10-1, CI11-3, and CI11-4 were identified as promising bioinoculants for development of microbial consortium having multifaceted PGP traits for nutritional benefits of nitrogen, phosphorus and zinc, and IAA hormonal benefits to citrus crops for better fitness in acid soils.<\/jats:p>","DOI":"10.3389\/fpls.2023.1104927","type":"journal-article","created":{"date-parts":[[2023,7,13]],"date-time":"2023-07-13T05:39:11Z","timestamp":1689226751000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":6,"title":["Plant growth\u2013promoting traits of culturable seed microbiome of citrus species from Purvanchal Himalaya"],"prefix":"10.3389","volume":"14","author":[{"given":"Sakshi","family":"Sinha","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dwipendra","family":"Thakuria","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Chayanika","family":"Chaliha","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Panchali","family":"Uzir","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Samarendra","family":"Hazarika","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Pranab","family":"Dutta","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"A. 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